(Q44023081)

29 November 2017

title

Lack of pseudouridine 38/39 in the anticodon arm of yeast cytoplasmic tRNA decreases in vivo recoding efficiency (English)

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29 November 2017

4

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29 November 2017

Olivier Namy

2

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Isabelle Hatin

object named as

Isabelle Hatin

series ordinal

3

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Henri Grosjean

series ordinal

6

object named as

Henri Grosjean

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29 November 2017

François Lecointe

1

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29 November 2017

Jean-Pierre Rousset

series ordinal

5

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29 November 2017

language of work or name

English

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publication date

10 June 2002

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Journal of Biological Chemistry

29 November 2017

published in

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29 November 2017

volume

277

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29 November 2017

issue

34

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29 November 2017

page(s)

30445-30453

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The RNA Modification Database: 1999 update

29 November 2017

cites work

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M203456200

Transfer RNA modification: influence on translational frameshifting and metabolism

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M203456200

Compilation of tRNA sequences and sequences of tRNA genes

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M203456200

Pseudouridine synthases: four families of enzymes containing a putative uridine-binding motif also conserved in dUTPases and dCTP deaminases

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M203456200

Comparative genomics and evolution of proteins involved in RNA metabolism

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M203456200

Deletion of the Escherichia coli pseudouridine synthase gene truB blocks formation of pseudouridine 55 in tRNA in vivo, does not affect exponential growth, but confers a strong selective disadvantage in competition with wild-type cells

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M203456200

Three modified nucleosides present in the anticodon stem and loop influence the in vivo aa-tRNA selection in a tRNA-dependent manner.

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M203456200

The yeast tRNA:pseudouridine synthase Pus1p displays a multisite substrate specificity

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M203456200

Pseudouridine mapping in the Saccharomyces cerevisiae spliceosomal U small nuclear RNAs (snRNAs) reveals that pseudouridine synthase pus1p exhibits a dual substrate specificity for U2 snRNA and tRNA.

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M203456200

Characterization of yeast protein Deg1 as pseudouridine synthase (Pus3) catalyzing the formation of psi 38 and psi 39 in tRNA anticodon loop.

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M203456200

The yeast gene YNL292w encodes a pseudouridine synthase (Pus4) catalyzing the formation of psi55 in both mitochondrial and cytoplasmic tRNAs

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M203456200

Identification and characterization of the tRNA:Psi 31-synthase (Pus6p) of Saccharomyces cerevisiae.

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M203456200

A gene tightly linked to CEN6 is important for growth of Saccharomyces cerevisiae.

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M203456200

Pus1p-dependent tRNA pseudouridinylation becomes essential when tRNA biogenesis is compromised in yeast.

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M203456200

Yeast Los1p has properties of an exportin-like nucleocytoplasmic transport factor for tRNA

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M203456200

Stabilization of RNA stacking by pseudouridine

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M203456200

Pseudouridine in the anticodon G psi A of plant cytoplasmic tRNA(Tyr) is required for UAG and UAA suppression in the TMV-specific context

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M203456200

Improvement of reading frame maintenance is a common function for several tRNA modifications

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M203456200

Multisite-specific tRNA:m5C-methyltransferase (Trm4) in yeast Saccharomyces cerevisiae: identification of the gene and substrate specificity of the enzyme

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M203456200

5-Methylcytidine is required for cooperative binding of Mg2+ and a conformational transition at the anticodon stem-loop of yeast phenylalanine tRNA.

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M203456200

Effect of intron mutations on processing and function of Saccharomyces cerevisiae SUP53 tRNA in vitro and in vivo

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M203456200

Versatile vectors to study recoding: conservation of rules between yeast and mammalian cells.

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M203456200

New heterologous modules for classical or PCR-based gene disruptions in Saccharomyces cerevisiae

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M203456200

Pleiotropic effects of intron removal on base modification pattern of yeast tRNAPhe: an in vitro study.

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M203456200

Impact of the six nucleotides downstream of the stop codon on translation termination

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M203456200

Nonsense-mediated decay mutants do not affect programmed -1 frameshifting

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M203456200

Eukaryotic release factor 1 (eRF1) abolishes readthrough and competes with suppressor tRNAs at all three termination codons in messenger RNA.

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M203456200

A conserved aspartate of tRNA pseudouridine synthase is essential for activity and a probable nucleophilic catalyst

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M203456200

Yeast tRNALeu(Anticodon U-A-G) translates all six leucine codons in extracts from interferon treated cells

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M203456200

Translational frameshifting: implications for the mechanism of translational frame maintenance

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M203456200

Special peptidyl-tRNA molecules can promote translational frameshifting without slippage.

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M203456200

Programmed +1 frameshifting stimulated by complementarity between a downstream mRNA sequence and an error-correcting region of rRNA.

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M203456200

Role of tRNA modification in translational fidelity

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M203456200

Misreading of termination codons in eukaryotes by natural nonsense suppressor tRNAs

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M203456200

tRNA structure and ribosomal function. I. tRNA nucleotide 27-43 mutations enhance first position wobble.

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M203456200

A second function for pseudouridine synthases: A point mutant of RluD unable to form pseudouridines 1911, 1915, and 1917 in Escherichia coli 23S ribosomal RNA restores normal growth to an RluD-minus strain

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M203456200

The DIM1 gene responsible for the conserved m6(2)Am6(2)A dimethylation in the 3'-terminal loop of 18 S rRNA is essential in yeast

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M203456200

The 18S rRNA dimethylase Dim1p is required for pre-ribosomal RNA processing in yeast.

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M203456200

Universal rules and idiosyncratic features in tRNA identity

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M203456200

Genomic organization and physical mapping of the transfer RNA genes in Escherichia coli K12.

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M203456200

tRNA genes and retroelements in the yeast genome

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M203456200

Programmed translational frameshifting in a gene required for yeast telomere replication

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M203456200

Cleavage of Structural Proteins during the Assembly of the Head of Bacteriophage T4

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M203456200

The yeast tRNATyr gene intron is essential for correct modification of its tRNA product

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M203456200

21 January 2018

Identifiers

DOI

10.1074/JBC.M203456200

1 reference

29 November 2017

1 reference