(Q44144466)

30 November 2017

title

Nucleosome positioning pattern derived from oligonucleotide compositions of genomic sequences (English)

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30 November 2017

Alexandra E Rapoport

1

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30 November 2017

Z M Frenkel

series ordinal

2

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30 November 2017

E N Trifonov

series ordinal

3

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30 November 2017

publication date

1 February 2011

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Journal of Biomolecular Structure and Dynamics

30 November 2017

published in

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30 November 2017

volume

28

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30 November 2017

issue

4

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30 November 2017

page(s)

567-574

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What controls nucleosome positions?

30 November 2017

cites work

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https://api.crossref.org/works/10.1080%2F07391102.2011.10531243

Nucleosome positioning by sequence, state of the art and apparent finale

21 January 2018

1 reference

https://api.crossref.org/works/10.1080%2F07391102.2011.10531243

A structural perspective on the where, how, why, and what of nucleosome positioning

21 January 2018

1 reference

https://api.crossref.org/works/10.1080%2F07391102.2011.10531243

Structure-based analysis of DNA sequence patterns guiding nucleosome positioning in vitro

21 January 2018

1 reference

https://api.crossref.org/works/10.1080%2F07391102.2011.10531243

Sequence-dependent Kink-and-Slide deformations of nucleosomal DNA facilitated by histone arginines bound in the minor groove

21 January 2018

1 reference

https://api.crossref.org/works/10.1080%2F07391102.2011.10531243

Electrostatic interactions between arginines and the minor groove in the nucleosome.

21 January 2018

1 reference

https://api.crossref.org/works/10.1080%2F07391102.2011.10531243

Sequence-dependent deformational anisotropy of chromatin DNA.

21 January 2018

1 reference

https://api.crossref.org/works/10.1080%2F07391102.2011.10531243

Nucleotide sequence-directed mapping of the nucleosomes

21 January 2018

1 reference

https://api.crossref.org/works/10.1080%2F07391102.2011.10531243

Flexibility and constraint in the nucleosome core landscape of Caenorhabditis elegans chromatin

21 January 2018

1 reference

https://api.crossref.org/works/10.1080%2F07391102.2011.10531243

Base pair stacking in nucleosome DNA and bendability sequence pattern.

21 January 2018

1 reference

https://api.crossref.org/works/10.1080%2F07391102.2011.10531243

Single-base resolution nucleosome mapping on DNA sequences

21 January 2018

1 reference

https://api.crossref.org/works/10.1080%2F07391102.2011.10531243

Repertoires of the nucleosome-positioning dinucleotides

21 January 2018

1 reference

https://api.crossref.org/works/10.1080%2F07391102.2011.10531243

The UCSC Table Browser data retrieval tool

21 January 2018

1 reference

https://api.crossref.org/works/10.1080%2F07391102.2011.10531243

Recognition of correct reading frame by the ribosome

21 January 2018

1 reference

https://api.crossref.org/works/10.1080%2F07391102.2011.10531243

Sequence structure of hidden 10.4-base repeat in the nucleosomes of C. elegans

21 January 2018

1 reference

https://api.crossref.org/works/10.1080%2F07391102.2011.10531243

Asymptotically increasing compliance of genomes with Chargaff's second parity rules through inversions and inverted transpositions

21 January 2018

1 reference

https://api.crossref.org/works/10.1080%2F07391102.2011.10531243

Three sequence rules for chromatin

21 January 2018

1 reference

https://api.crossref.org/works/10.1080%2F07391102.2011.10531243

Periodicities of 10-11bp as indicators of the supercoiled state of genomic DNA.

21 January 2018

1 reference

https://api.crossref.org/works/10.1080%2F07391102.2011.10531243

The role of DNA shape in protein-DNA recognition

21 January 2018

1 reference

https://api.crossref.org/works/10.1080%2F07391102.2011.10531243

Periodicity in DNA primary structure is defined by secondary structure of the coded protein

21 January 2018

1 reference

https://api.crossref.org/works/10.1080%2F07391102.2011.10531243

10-11 bp periodicities in complete genomes reflect protein structure and DNA folding

21 January 2018

1 reference

https://api.crossref.org/works/10.1080%2F07391102.2011.10531243

The multiple codes of nucleotide sequences

21 January 2018

1 reference

https://api.crossref.org/works/10.1080%2F07391102.2011.10531243

Yeast nucleosome DNA pattern: deconvolution from genome sequences of S. cerevisiae.

21 January 2018

1 reference

https://api.crossref.org/works/10.1080%2F07391102.2011.10531243

Dinucleosome DNA of human K562 cells: experimental and computational characterizations.

21 January 2018

1 reference

https://api.crossref.org/works/10.1080%2F07391102.2011.10531243

10.1080/07391102.2011.10531243

21 January 2018

Identifiers

DOI

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30 November 2017

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