(Q44218311)

30 November 2017

A comparative study of HIV-1 and HTLV-I protease structure and dynamics reveals a conserved residue interaction network (English)

1 reference

Human T-lymphotropic virus 1

30 November 2017

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author

Heinrich Sticht

series ordinal

4

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30 November 2017

Pia Rücker

1

1 reference

PubMed ID

21279524

30 November 2017

Anselm H C Horn

series ordinal

2

1 reference

PubMed ID

21279524

30 November 2017

Heike Meiselbach

series ordinal

3

1 reference

30 November 2017

29 January 2011

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Journal of Molecular Modeling

30 November 2017

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30 November 2017

17

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30 November 2017

2693-2705

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30 November 2017

10

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https://scigraph.springernature.com/pub.10.1007/s00894-011-0971-1

30 November 2017

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Monoclonal integration of human T-cell leukemia provirus in all primary tumors of adult T-cell leukemia suggests causative role of human T-cell leukemia virus in the disease

21 January 2018

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Antibodies to human T-lymphotropic virus type-I in patients with tropical spastic paraparesis

21 January 2018

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Infective dermatitis of Jamaican children: a marker for HTLV-I infection.

21 January 2018

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HTLV-I uveitis: a distinct clinical entity caused by HTLV-I

21 January 2018

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HTLV-1 and polymyositis in Jamaica

21 January 2018

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Chronic inflammatory arthropathy associated with HTLV-I.

21 January 2018

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An HTLV-I vaccine: why, how, for whom?

21 January 2018

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Isolation of a T-Lymphotropic Retrovirus from a Patient at Risk for Acquired Immune Deficiency Syndrome (AIDS)

21 January 2018

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Frequent Detection and Isolation of Cytopathic Retroviruses (HTLV-III) from Patients with AIDS and at Risk for AIDS

21 January 2018

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Treatment of adult T-cell leukemia/lymphoma: past, present, and future

21 January 2018

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Stabilization from autoproteolysis and kinetic characterization of the human T-cell leukemia virus type 1 proteinase

21 January 2018

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Crystal structure of human T cell leukemia virus protease, a novel target for anticancer drug design

21 January 2018

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21 January 2018

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Effects of the V82A and I54V mutations on the dynamics and ligand binding properties of HIV-1 protease

21 January 2018

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Insights into amprenavir resistance in E35D HIV-1 protease mutation from molecular dynamics and binding free-energy calculations.

21 January 2018

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The Amber biomolecular simulation programs

21 January 2018

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A Second Generation Force Field for the Simulation of Proteins, Nucleic Acids, and Organic Molecules

21 January 2018

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Comparison of simple potential functions for simulating liquid water

21 January 2018

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Development and testing of a general amber force field

21 January 2018

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Numerical integration of the cartesian equations of motion of a system with constraints: molecular dynamics of n-alkanes

21 January 2018

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Analysis of cross reactivity of retrovirus proteases using a vaccinia virus-T7 RNA polymerase-based expression system

21 January 2018

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Development of a microtiter plate fluorescent assay for inhibition studies on the HTLV-1 and HIV-1 proteinases

21 January 2018

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Comparison of the substrate specificity of the human T-cell leukemia virus and human immunodeficiency virus proteinases

21 January 2018

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Studies on the role of the S4 substrate binding site of HIV proteinases

21 January 2018

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Comparison of inhibitor binding in HIV-1 protease and in non-viral aspartic proteases: the role of the flap

21 January 2018

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Inhibitor binding to the Phe53Trp mutant of HIV-1 protease promotes conformational changes detectable by spectrofluorometry.

21 January 2018

1 reference

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HIV-1 protease flaps spontaneously open and reclose in molecular dynamics simulations

21 January 2018

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HIV-1 protease molecular dynamics of a wild-type and of the V82F/I84V mutant: possible contributions to drug resistance and a potential new target site for drugs

21 January 2018

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Closing of the flaps of HIV-1 protease induced by substrate binding: a model of a flap closing mechanism in retroviral aspartic proteases.

21 January 2018

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The three-dimensional structure of the aspartyl protease from the HIV-1 isolate BRU

21 January 2018

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Rapid structural fluctuations of the free HIV protease flaps in solution: relationship to crystal structures and comparison with predictions of dynamics calculations

21 January 2018

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Drug pressure selected mutations in HIV-1 protease alter flap conformations

21 January 2018

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Conformational flexibility in the flap domains of ligand-free HIV protease

21 January 2018

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Subtype polymorphisms among HIV-1 protease variants confer altered flap conformations and flexibility

21 January 2018

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Fragment-Based Screen against HIV Protease

21 January 2018

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Molecular dynamics and free energy studies on the wild-type and mutated HIV-1 protease complexed with four approved drugs: mechanism of binding and drug resistance.

21 January 2018

1 reference

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A look inside HIV resistance through retroviral protease interaction maps

21 January 2018

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Structural and kinetic analysis of drug resistant mutants of HIV-1 protease

21 January 2018

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Molecular mechanics analysis of drug-resistant mutants of HIV protease.

21 January 2018

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Molecular analysis of the HIV-1 resistance development: enzymatic activities, crystal structures, and thermodynamics of nelfinavir-resistant HIV protease mutants

21 January 2018

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Novel method for probing the specificity binding profile of ligands: applications to HIV protease

21 January 2018

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Hydrophobic sliding: a possible mechanism for drug resistance in human immunodeficiency virus type 1 protease

21 January 2018

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Particle mesh Ewald: An N⋅log(N) method for Ewald sums in large systems

21 January 2018

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Ionization states of the catalytic residues in HIV-1 protease

21 January 2018

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12 December 2020

A modified version of the Cornell et al. force field with improved sugar pucker phases and helical repeat

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12 December 2020

Virological aspects of tropical spastic paraparesis/HTLV-I associated myelopathy and HTLV-I infection

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12 December 2020

Structure of complex of synthetic HIV-1 protease with a substrate-based inhibitor at 2.3 A resolution

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12 December 2020

Computational simulations of HIV-1 proteases--multi-drug resistance due to nonactive site mutation L90M

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12 December 2020

Molecular Dynamics Simulations of HIV-1 Protease Suggest Different Mechanisms Contributing to Drug Resistance.

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12 December 2020

Flap opening and dimer-interface flexibility in the free and inhibitor-bound HIV protease, and their implications for function

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12 December 2020

Two-step binding mechanism for HIV protease inhibitors

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12 December 2020

Human T-cell lymphotropic virus type 1 tax among American blood donors

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12 December 2020

Very fast prediction and rationalization of pKa values for protein-ligand complexes

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12 December 2020

Narrow substrate specificity and sensitivity toward ligand-binding site mutations of human T-cell Leukemia virus type 1 protease

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12 December 2020

A molecular dynamics study comparing a wild-type with a multiple drug resistant HIV protease: differences in flap and aspartate 25 cavity dimensions

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12 December 2020

LIGPLOT: a program to generate schematic diagrams of protein-ligand interactions

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12 December 2020

10.1007/S00894-011-0971-1

Identifiers

DOI

1 reference

30 November 2017

1 reference

PubMed ID

21279524