(Q44396492)

2 December 2017

Protein hinge bending as seen in molecular dynamics simulations of native and M61 mutant T4 lysozymes (English)

1 reference

2 December 2017

Arnold GE

1

1 reference

PubMed ID

9095676

2 December 2017

Ornstein RL

series ordinal

2

1 reference

PubMed ID

9095676

2 December 2017

language of work or name

1 reference

1 April 1997

1 reference

2 December 2017

1 reference

2 December 2017

41

1 reference

2 December 2017

533-544

1 reference

2 December 2017

5

1 reference

The Three Dimensional Structure of the Lysozyme from Bacteriophage T4

2 December 2017

1 reference

https://api.crossref.org/works/10.1002%2F%28SICI%291097-0282%2819970415%2941%3A5%3C533%3A%3AAID-BIP5%3E3.0.CO%3B2-N

A mutant T4 lysozyme displays five different crystal conformations

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2F%28SICI%291097-0282%2819970415%2941%3A5%3C533%3A%3AAID-BIP5%3E3.0.CO%3B2-N

Structure of a stabilizing disulfide bridge mutant that closes the active‐site cleft of T4 lysozyme

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2F%28SICI%291097-0282%2819970415%2941%3A5%3C533%3A%3AAID-BIP5%3E3.0.CO%3B2-N

Protein flexibility and adaptability seen in 25 crystal forms of T4 lysozyme

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2F%28SICI%291097-0282%2819970415%2941%3A5%3C533%3A%3AAID-BIP5%3E3.0.CO%3B2-N

The Protein Data Bank: a computer-based archival file for macromolecular structures

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2F%28SICI%291097-0282%2819970415%2941%3A5%3C533%3A%3AAID-BIP5%3E3.0.CO%3B2-N

Structure of bacteriophage T4 lysozyme refined at 1.7 A resolution

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2F%28SICI%291097-0282%2819970415%2941%3A5%3C533%3A%3AAID-BIP5%3E3.0.CO%3B2-N

Structure and energetics of ligand binding to proteins: Escherichia coli dihydrofolate reductase-trimethoprim, a drug-receptor system.

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2F%28SICI%291097-0282%2819970415%2941%3A5%3C533%3A%3AAID-BIP5%3E3.0.CO%3B2-N

A method for determining the positions of polar hydrogens added to a protein structure that maximizes protein hydrogen bonding

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2F%28SICI%291097-0282%2819970415%2941%3A5%3C533%3A%3AAID-BIP5%3E3.0.CO%3B2-N

Computer "Experiments" on Classical Fluids. I. Thermodynamical Properties of Lennard-Jones Molecules

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2F%28SICI%291097-0282%2819970415%2941%3A5%3C533%3A%3AAID-BIP5%3E3.0.CO%3B2-N

The effects of truncating long-range forces on protein dynamics.

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2F%28SICI%291097-0282%2819970415%2941%3A5%3C533%3A%3AAID-BIP5%3E3.0.CO%3B2-N

Molecular dynamics simulations of protein unfolding and limited refolding: characterization of partially unfolded states of ubiquitin in 60% methanol and in water

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2F%28SICI%291097-0282%2819970415%2941%3A5%3C533%3A%3AAID-BIP5%3E3.0.CO%3B2-N

Human type-alpha transforming growth factor undergoes slow conformational exchange between multiple backbone conformations as characterized by nitrogen-15 relaxation measurements

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2F%28SICI%291097-0282%2819970415%2941%3A5%3C533%3A%3AAID-BIP5%3E3.0.CO%3B2-N

Large amplitude twisting motions of an interdomain hinge: a disulfide trapping study of the galactose-glucose binding protein

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2F%28SICI%291097-0282%2819970415%2941%3A5%3C533%3A%3AAID-BIP5%3E3.0.CO%3B2-N

The interpretation of protein structures: Estimation of static accessibility

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2F%28SICI%291097-0282%2819970415%2941%3A5%3C533%3A%3AAID-BIP5%3E3.0.CO%3B2-N

Structural comparison suggests that thermolysin and related neutral proteases undergo hinge-bending motion during catalysis

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2F%28SICI%291097-0282%2819970415%2941%3A5%3C533%3A%3AAID-BIP5%3E3.0.CO%3B2-N

Crystallographic evidence of a large ligand-induced hinge-twist motion between the two domains of the maltodextrin binding protein involved in active transport and chemotaxis

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2F%28SICI%291097-0282%2819970415%2941%3A5%3C533%3A%3AAID-BIP5%3E3.0.CO%3B2-N

Domain closure in lactoferrin. Two hinges produce a see-saw motion between alternative close-packed interfaces

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2F%28SICI%291097-0282%2819970415%2941%3A5%3C533%3A%3AAID-BIP5%3E3.0.CO%3B2-N

Refined 1.89-A structure of the histidine-binding protein complexed with histidine and its relationship with many other active transport/chemosensory proteins

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2F%28SICI%291097-0282%2819970415%2941%3A5%3C533%3A%3AAID-BIP5%3E3.0.CO%3B2-N

Anatomy of a conformational change: hinged "lid" motion of the triosephosphate isomerase loop.

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2F%28SICI%291097-0282%2819970415%2941%3A5%3C533%3A%3AAID-BIP5%3E3.0.CO%3B2-N

Gating of the active site of triose phosphate isomerase: Brownian dynamics simulations of flexible peptide loops in the enzyme

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2F%28SICI%291097-0282%2819970415%2941%3A5%3C533%3A%3AAID-BIP5%3E3.0.CO%3B2-N

Dramatic differences in the motions of the mouth of open and closed cytochrome P450BM-3 by molecular dynamics simulations.

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2F%28SICI%291097-0282%2819970415%2941%3A5%3C533%3A%3AAID-BIP5%3E3.0.CO%3B2-N

Molecular dynamics with coupling to an external bath

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2F%28SICI%291097-0282%2819970415%2941%3A5%3C533%3A%3AAID-BIP5%3E3.0.CO%3B2-N

The hinge-bending mode in lysozyme

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2F%28SICI%291097-0282%2819970415%2941%3A5%3C533%3A%3AAID-BIP5%3E3.0.CO%3B2-N

Relation between hen egg white lysozyme and bacteriophage T4 lysozyme: Evolutionary implications

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2F%28SICI%291097-0282%2819970415%2941%3A5%3C533%3A%3AAID-BIP5%3E3.0.CO%3B2-N

Structure of a hinge-bending bacteriophage T4 lysozyme mutant, Ile3-->Pro

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2F%28SICI%291097-0282%2819970415%2941%3A5%3C533%3A%3AAID-BIP5%3E3.0.CO%3B2-N

An evaluation of implicit and explicit solvent model systems for the molecular dynamics simulation of bacteriophage T4 lysozyme

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2F%28SICI%291097-0282%2819970415%2941%3A5%3C533%3A%3AAID-BIP5%3E3.0.CO%3B2-N

Conformational and helicoidal analysis of the molecular dynamics of proteins: "curves," dials and windows for a 50 psec dynamic trajectory of BPTI

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2F%28SICI%291097-0282%2819970415%2941%3A5%3C533%3A%3AAID-BIP5%3E3.0.CO%3B2-N

The structure of the MnIIADP-nitrate-lyxose complex at the active site of hexokinase

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2F%28SICI%291097-0282%2819970415%2941%3A5%3C533%3A%3AAID-BIP5%3E3.0.CO%3B2-N

The effect of substrates on the inter-domain interactions of the hinge-bending enzyme 3-phosphoglycerate kinase

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2F%28SICI%291097-0282%2819970415%2941%3A5%3C533%3A%3AAID-BIP5%3E3.0.CO%3B2-N

Domain closure in adenylate kinase. Joints on either side of two helices close like neighboring fingers

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2F%28SICI%291097-0282%2819970415%2941%3A5%3C533%3A%3AAID-BIP5%3E3.0.CO%3B2-N

Investigation of domain motions in bacteriophage T4 lysozyme

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2F%28SICI%291097-0282%2819970415%2941%3A5%3C533%3A%3AAID-BIP5%3E3.0.CO%3B2-N

DNA binding by TATA-box binding protein (TBP): a molecular dynamics computational study

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2F%28SICI%291097-0282%2819970415%2941%3A5%3C533%3A%3AAID-BIP5%3E3.0.CO%3B2-N

10.1002/(SICI)1097-0282(19970415)41:5<533::AID-BIP5>3.0.CO;2-N

21 January 2018

Identifiers

DOI

1 reference

2 December 2017

1 reference

PubMed ID

9095676