(Q44408566)

2 December 2017

MODIP revisited: re-evaluation and refinement of an automated procedure for modeling of disulfide bonds in proteins (English)

1 reference

2 December 2017

1 reference

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?resulttype=core&format=json&query=SRC%3AMED%20AND%20EXT_ID%3A12702798

25 December 2023

1 reference

https://api.crossref.org/works/10.1093/PROENG/GZG024

25 December 2023

1 reference

https://api.crossref.org/works/10.1093/PROENG/GZG024

25 December 2023

1 reference

https://api.crossref.org/works/10.1093/PROENG/GZG024

25 December 2023

author name string

Raghavan Varadarajan

3

1 reference

2 December 2017

Vardhan S. Dani

1

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?resulttype=core&format=json&query=SRC%3AMED%20AND%20EXT_ID%3A12702798

25 December 2023

C. Ramakrishnan

2

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?resulttype=core&format=json&query=SRC%3AMED%20AND%20EXT_ID%3A12702798

25 December 2023

language of work or name

English

1 reference

National Center for Biotechnology Information

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/esummary.fcgi?db=pubmed&retmode=json&id=12702798

25 December 2023

publication date

1 March 2003

1 reference

Protein Engineering Design and Selection

2 December 2017

1 reference

2 December 2017

16

1 reference

2 December 2017

3

1 reference

2 December 2017

187-193

1 reference

Unusual effects of an engineered disulfide on global and local protein stability

2 December 2017

2

1 reference

https://api.crossref.org/works/10.1093/PROENG/GZG024

Novel disulfide engineering in human carbonic anhydrase II using the PAIRWISE side-chain geometry database

25 December 2023

3

1 reference

https://api.crossref.org/works/10.1093/PROENG/GZG024

Residue depth: a novel parameter for the analysis of protein structure and stability.

25 December 2023

4

1 reference

https://api.crossref.org/works/10.1093/PROENG/GZG024

Elucidation of determinants of protein stability through genome sequence analysis.

25 December 2023

5

1 reference

https://api.crossref.org/works/10.1093/PROENG/GZG024

A procedure for detection and quantitation of cavity volumes proteins. Application to measure the strength of the hydrophobic driving force in protein folding.

25 December 2023

6

1 reference

https://api.crossref.org/works/10.1093/PROENG/GZG024

Stereochemical studies of cyclic peptides. VI. Energy calculations of the cyclic disulphide cysteinyl-cysteine

25 December 2023

7

1 reference

https://api.crossref.org/works/10.1093/PROENG/GZG024

Thermostable variants of bovine beta-lactoglobulin.

25 December 2023

8

1 reference

https://api.crossref.org/works/10.1093/PROENG/GZG024

Disulfide mutants of barnase. I: Changes in stability and structure assessed by biophysical methods and X-ray crystallography

25 December 2023

9

1 reference

https://api.crossref.org/works/10.1093/PROENG/GZG024

Disulphide bonds and protein stability

25 December 2023

10

1 reference

https://api.crossref.org/works/10.1093/PROENG/GZG024

Is the hydrophobic effect stabilizing or destabilizing in proteins?

25 December 2023

11

1 reference

https://api.crossref.org/works/10.1093/PROENG/GZG024

Mutational modulation of substrate bond-type specificity and thermostability of glucoamylase from Aspergillus awamori by replacement with short homologue active site sequences and thiol/disulfide engineering

25 December 2023

12

1 reference

https://api.crossref.org/works/10.1093/PROENG/GZG024

Stabilization of human RNase 1 by introduction of a disulfide bond between residues 4 and 118.

25 December 2023

13

1 reference

https://api.crossref.org/works/10.1093/PROENG/GZG024

Thermal stabilization of thymidylate synthase by engineering two disulfide bridges across the dimer interface.

25 December 2023

14

1 reference

https://api.crossref.org/works/10.1093/PROENG/GZG024

Cavity-creating mutation at the dimer interface of Plasmodium falciparum triosephosphate isomerase: restoration of stability by disulfide cross-linking of subunits.

25 December 2023

15

1 reference

https://api.crossref.org/works/10.1093/PROENG/GZG024

Model building of disulfide bonds in proteins with known three-dimensional structure.

25 December 2023

17

1 reference

https://api.crossref.org/works/10.1093/PROENG/GZG024

Engineered disulfide bonds in staphylococcal nuclease: effects on the stability and conformation of the folded protein

25 December 2023

18

1 reference

https://api.crossref.org/works/10.1093/PROENG/GZG024

Structure of a stabilizing disulfide bridge mutant that closes the active‐site cleft of T4 lysozyme

25 December 2023

19

1 reference

https://api.crossref.org/works/10.1093/PROENG/GZG024

Enhancement of thermostability and catalytic efficiency of AprP, an alkaline protease from Pseudomonas sp., by the introduction of a disulfide bond

25 December 2023

23

1 reference

https://api.crossref.org/works/10.1093/PROENG/GZG024

The interpretation of protein structures: Estimation of static accessibility

25 December 2023

24

1 reference

https://api.crossref.org/works/10.1093/PROENG/GZG024

Effect on thermostability and catalytic activity of introducing disulfide bonds into Aspergillus awamori glucoamylase

25 December 2023

25

1 reference

https://api.crossref.org/works/10.1093/PROENG/GZG024

16 Stabilization of functional proteins by introduction of multiple disulfide bonds

25 December 2023

26

1 reference

https://api.crossref.org/works/10.1093/PROENG/GZG024

Structural and genetic analysis of protein stability

25 December 2023

27

1 reference

https://api.crossref.org/works/10.1093/PROENG/GZG024

Protein engineering of disulfide bonds in subtilisin BPN'.

25 December 2023

28

1 reference

https://api.crossref.org/works/10.1093/PROENG/GZG024

Computer-aided model-building strategies for protein design

25 December 2023

29

1 reference

https://api.crossref.org/works/10.1093/PROENG/GZG024

Protein engineering of subtilisin BPN': enhanced stabilization through the introduction of two cysteines to form a disulfide bond

25 December 2023

31

1 reference

https://api.crossref.org/works/10.1093/PROENG/GZG024

Amino acid neighbours and detailed conformational analysis of cysteines in proteins

25 December 2023

32

1 reference

https://api.crossref.org/works/10.1093/PROENG/GZG024

Structure of a thermostable disulfide-bridge mutant of phage T4 lysozyme shows that an engineered cross-link in a flexible region does not increase the rigidity of the folded protein

25 December 2023

33

1 reference

https://api.crossref.org/works/10.1093/PROENG/GZG024

Conformation of Polypeptides and Proteins

25 December 2023

34

1 reference

https://api.crossref.org/works/10.1093/PROENG/GZG024

Engineering a disulfide bond in recombinant manganese peroxidase results in increased thermostability

25 December 2023

35

1 reference

https://api.crossref.org/works/10.1093/PROENG/GZG024

Engineering interchain disulfide bonds into conserved framework regions of Fv fragments: improved biochemical characteristics of recombinant immunotoxins containing disulfide-stabilized Fv.

25 December 2023

36

1 reference

https://api.crossref.org/works/10.1093/PROENG/GZG024

Striking stabilization of Arc repressor by an engineered disulfide bond

25 December 2023

37

1 reference

https://api.crossref.org/works/10.1093/PROENG/GZG024

A single disulfide bond restores thermodynamic and proteolytic stability to an extensively mutated protein

25 December 2023

38

1 reference

https://api.crossref.org/works/10.1093/PROENG/GZG024

An engineered intersubunit disulfide enhances the stability and DNA binding of the N-terminal domain of lambda repressor.

25 December 2023

39

1 reference

https://api.crossref.org/works/10.1093/PROENG/GZG024

Stereochemical modeling of disulfide bridges. Criteria for introduction into proteins by site-directed mutagenesis

25 December 2023

41

1 reference

https://api.crossref.org/works/10.1093/PROENG/GZG024

Conformations of disulfide bridges in proteins

25 December 2023

42

1 reference

https://api.crossref.org/works/10.1093/PROENG/GZG024

Disulphide bridges in globular proteins

25 December 2023

43

1 reference

https://api.crossref.org/works/10.1093/PROENG/GZG024

The contribution of cross-links to protein stability: a normal mode analysis of the configurational entropy of the native state.

25 December 2023

44

1 reference

https://api.crossref.org/works/10.1093/PROENG/GZG024

Crystal structure of heat-labile enterotoxin from Escherichia coli with increased thermostability introduced by an engineered disulfide bond in the A subunit

25 December 2023

45

1 reference

https://api.crossref.org/works/10.1093/PROENG/GZG024

Disulfide engineering at the dimer interface of Lactobacillus casei thymidylate synthase: crystal structure of the T155C/E188C/C244T mutant

25 December 2023

46

1 reference

https://api.crossref.org/works/10.1093/PROENG/GZG024

An engineered disulfide bond in dihydrofolate reductase.

25 December 2023

47

1 reference

https://api.crossref.org/works/10.1093/PROENG/GZG024

Thermostabilization of the Bacillus circulans xylanase by the introduction of disulfide bonds

25 December 2023

48

1 reference

https://api.crossref.org/works/10.1093/PROENG/GZG024

Engineered disulfide bonds in recombinant human interferon-gamma: the impact of the N-terminal helix A and the AB-loop on protein stability

25 December 2023

49

1 reference

https://api.crossref.org/works/10.1093/PROENG/GZG024

25 December 2023

Identifiers

1 reference

2 December 2017

1 reference