(Q44866145)

6 December 2017

Systems for the NMR study of modified nucleoside-dependent, metal-ion induced conformational changes in nucleic acids (English)

1 reference

6 December 2017

Agris PF

1

1 reference

PubMed ID

8569499

6 December 2017

Brown SC

series ordinal

2

1 reference

PubMed ID

8569499

6 December 2017

language of work or name

English

0 references

publication date

1 January 1995

1 reference

6 December 2017

Methods in Enzymology

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6 December 2017

261

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6 December 2017

270-299

1 reference

5-Methylcytidine is required for cooperative binding of Mg2+ and a conformational transition at the anticodon stem-loop of yeast phenylalanine tRNA.

6 December 2017

1 reference

https://api.crossref.org/works/10.1016%2FS0076-6879%2895%2961014-6

7 January 2021

Site-selected introduction of modified purine and pyrimidine ribonucleosides into RNA by automated phosphoramidite chemistry.

1 reference

https://api.crossref.org/works/10.1016%2FS0076-6879%2895%2961014-6

7 January 2021

A magnesium-induced conformational transition in the loop of a DNA analog of the yeast tRNA(Phe) anticodon is dependent on RNA-like modifications of the bases of the stem

1 reference

https://api.crossref.org/works/10.1016%2FS0076-6879%2895%2961014-6

7 January 2021

The role of 5-methylcytidine in the anticodon arm of yeast tRNA(Phe): site-specific Mg2+ binding and coupled conformational transition in DNA analogs

1 reference

https://api.crossref.org/works/10.1016%2FS0076-6879%2895%2961014-6

7 January 2021

Summary: the modified nucleosides of RNA.

1 reference

https://api.crossref.org/works/10.1016%2FS0076-6879%2895%2961014-6

7 January 2021

Comparative structural analysis of 1-methyladenosine, 7-methylguanosine, ethenoadenosine and their protonated salts IV: 1H, 13C, and 15N NMR studies at natural isotope abundance

1 reference

https://api.crossref.org/works/10.1016%2FS0076-6879%2895%2961014-6

7 January 2021

A C-nucleotide base pair: methylpseudouridine-directed incorporation of formycin triphosphate into RNA catalyzed by T7 RNA polymerase

1 reference

https://api.crossref.org/works/10.1016%2FS0076-6879%2895%2961014-6

7 January 2021

Enzymatic incorporation of a new base pair into DNA and RNA extends the genetic alphabet

1 reference

https://api.crossref.org/works/10.1016%2FS0076-6879%2895%2961014-6

7 January 2021

Ribosome-mediated incorporation of a non-standard amino acid into a peptide through expansion of the genetic code

1 reference

https://api.crossref.org/works/10.1016%2FS0076-6879%2895%2961014-6

7 January 2021

Structure of an unmodified tRNA molecule

1 reference

https://api.crossref.org/works/10.1016%2FS0076-6879%2895%2961014-6

7 January 2021

Recognition of tertiary structure in tRNAs by Rh(phen)2phi3+, a new reagent for RNA structure-function mapping

1 reference

https://api.crossref.org/works/10.1016%2FS0076-6879%2895%2961014-6

7 January 2021

Codon and amino-acid specificities of a transfer RNA are both converted by a single post-transcriptional modification

1 reference

https://api.crossref.org/works/10.1016%2FS0076-6879%2895%2961014-6

7 January 2021

Modified bases and aminoacylation

1 reference

https://api.crossref.org/works/10.1016%2FS0076-6879%2895%2961014-6

7 January 2021

Role of tRNA modification in translational fidelity

1 reference

https://api.crossref.org/works/10.1016%2FS0076-6879%2895%2961014-6

7 January 2021

Prevention of translational frameshifting by the modified nucleoside 1-methylguanosine.

1 reference

https://api.crossref.org/works/10.1016%2FS0076-6879%2895%2961014-6

7 January 2021

Aminoacyl-tRNA synthetase and U54 methyltransferase recognize conformations of the yeast tRNA(Phe) anticodon and T stem/loop domain

1 reference

https://api.crossref.org/works/10.1016%2FS0076-6879%2895%2961014-6

7 January 2021

Nitrogen-15-labeled yeast tRNAPhe: double and two-dimensional heteronuclear NMR of guanosine and uracil ring NH groups

1 reference

https://api.crossref.org/works/10.1016%2FS0076-6879%2895%2961014-6

7 January 2021

Complete assignment of the imino protons of Escherichia coli valine transfer RNA: two-dimensional NMR studies in water

1 reference

https://api.crossref.org/works/10.1016%2FS0076-6879%2895%2961014-6

7 January 2021

15N-labeled 5S RNA. Identification of uridine base pairs in Escherichia coli 5S RNA by 1H-15N multiple quantum NMR.

1 reference

https://api.crossref.org/works/10.1016%2FS0076-6879%2895%2961014-6

7 January 2021

NMR study of nitrogen-15-labeled Escherichia coli valine transfer RNA.

1 reference

https://api.crossref.org/works/10.1016%2FS0076-6879%2895%2961014-6

7 January 2021

Complete nuclear magnetic resonance signal assignments and initial structural studies of [13C]methyl-enriched yeast transfer ribonucleic acid

1 reference

https://api.crossref.org/works/10.1016%2FS0076-6879%2895%2961014-6

7 January 2021

Nuclear magnetic resonance signal assignments of purified [13C]methyl-enriched yeast phenylalanine transfer ribonucleic acid

1 reference

https://api.crossref.org/works/10.1016%2FS0076-6879%2895%2961014-6

7 January 2021

Transfer RNA contains sites of localized positive charge: carbon NMR studies of [13C]methyl-enriched Escherichia coli and yeast tRNAPhe

1 reference

https://api.crossref.org/works/10.1016%2FS0076-6879%2895%2961014-6

7 January 2021

Fluorine-19 nuclear magnetic resonance studies of the structure of 5-fluorouracil-substituted Escherichia coli transfer RNA.

1 reference

https://api.crossref.org/works/10.1016%2FS0076-6879%2895%2961014-6

7 January 2021

RNA structure and NMR spectroscopy

1 reference

https://api.crossref.org/works/10.1016%2FS0076-6879%2895%2961014-6

7 January 2021

Utilization of an Escherichia coli mutant for carbon-13 enrichment of tRNA for NMR studies

1 reference

https://api.crossref.org/works/10.1016%2FS0076-6879%2895%2961014-6

7 January 2021

Fluorine-19 NMR studies of the thermal unfolding of 5-fluorouracil-substitutedEscherichia colivaline transfer RNA

1 reference

https://api.crossref.org/works/10.1016%2FS0076-6879%2895%2961014-6

7 January 2021

Preparation of 13C and 15N labelled RNAs for heteronuclear multi-dimensional NMR studies

1 reference

https://api.crossref.org/works/10.1016%2FS0076-6879%2895%2961014-6

7 January 2021

Structural dynamics of transfer ribonucleic aic carbon-13 nuclear magnetic resonance of [13C]methyl-enriched pure species

1 reference

https://api.crossref.org/works/10.1016%2FS0076-6879%2895%2961014-6

7 January 2021

Small RNA helices as substrates for aminoacylation and their relationship to charging of transfer RNAs

1 reference

https://api.crossref.org/works/10.1016%2FS0076-6879%2895%2961014-6

7 January 2021

Conversion of a methionine initiator tRNA into a tryptophan-inserting elongator tRNA in vivo

1 reference

https://api.crossref.org/works/10.1016%2FS0076-6879%2895%2961014-6

7 January 2021

The T-arm of tRNA is a substrate for tRNA (m5U54)-methyltransferase

1 reference

https://api.crossref.org/works/10.1016%2FS0076-6879%2895%2961014-6

7 January 2021

Structure of an unusually stable RNA hairpin

1 reference

https://api.crossref.org/works/10.1016%2FS0076-6879%2895%2961014-6

7 January 2021

Structural Features that Give Rise to the Unusual Stability of RNA Hairpins Containing GNRA Loops

1 reference

https://api.crossref.org/works/10.1016%2FS0076-6879%2895%2961014-6

7 January 2021

Multinuclear NMR studies of DNA hairpins. 1. Structure and dynamics of d(CGCGTTGTTCGCG).

1 reference

https://api.crossref.org/works/10.1016%2FS0076-6879%2895%2961014-6

7 January 2021

NMR analysis of helix I from the 5S RNA of Escherichia coli

1 reference

https://api.crossref.org/works/10.1016%2FS0076-6879%2895%2961014-6

7 January 2021

Thermodynamic parameters for loop formation in RNA and DNA hairpin tetraloops

1 reference

https://api.crossref.org/works/10.1016%2FS0076-6879%2895%2961014-6

7 January 2021

Comparative NMR study of An-bulge loops in DNA duplexes: intrahelical stacking of A, A-A, and A-A-A bulge loops

1 reference

https://api.crossref.org/works/10.1016%2FS0076-6879%2895%2961014-6

7 January 2021

Effects of single-base bulges on intercalator binding to small RNA and DNA hairpins and a ribosomal RNA fragment.

1 reference

https://api.crossref.org/works/10.1016%2FS0076-6879%2895%2961014-6

7 January 2021

Wobble position modified nucleosides evolved to select transfer RNA codon recognition: A modified-wobble hypothesis

1 reference

https://api.crossref.org/works/10.1016%2FS0076-6879%2895%2961014-6

7 January 2021

Structure of the B-DNA decamer C-C-A-A-C-G-T-T-G-G and comparison with isomorphous decamers C-C-A-A-G-A-T-T-G-G and C-C-A-G-G-C-C-T-G-G

1 reference

https://api.crossref.org/works/10.1016%2FS0076-6879%2895%2961014-6

7 January 2021

RNA folding: pseudoknots, loops and bulges

1 reference

https://api.crossref.org/works/10.1016%2FS0076-6879%2895%2961014-6

7 January 2021

Toward a Dynamical Structure of DNA: Comparison of Theoretical and Experimental NOE Intensities

1 reference

https://api.crossref.org/works/10.1016%2FS0076-6879%2895%2961014-6

7 January 2021

500-MHz proton NMR evidence for two solution structures of the common arm base-paired segment of wheat germ 5S ribosomal RNA

1 reference

https://api.crossref.org/works/10.1016%2FS0076-6879%2895%2961014-6

7 January 2021

Production of specific site probes of tRNA structure by enrichment with carbon 13 at particular locations

1 reference

https://api.crossref.org/works/10.1016%2FS0076-6879%2895%2961014-6

7 January 2021

Purification of transfer RNA species by single-step ion-exchange high-performance liquid chromatography

1 reference

https://api.crossref.org/works/10.1016%2FS0076-6879%2895%2961014-6

7 January 2021

Chemical synthesis of a biologically active natural tRNA with its minor bases

1 reference

https://api.crossref.org/works/10.1016%2FS0076-6879%2895%2961014-6

7 January 2021

Properties of pseudouridine N1 imino protons located in the major groove of an A-form RNA duplex

1 reference

https://api.crossref.org/works/10.1016%2FS0076-6879%2895%2961014-6

7 January 2021

Chemical synthesis of biologically active oligoribonucleotides using beta-cyanoethyl protected ribonucleoside phosphoramidites

1 reference

https://api.crossref.org/works/10.1016%2FS0076-6879%2895%2961014-6

7 January 2021

Solid phase synthesis of the 5'-half of the initiator t-RNA from B. subtilis

1 reference

https://api.crossref.org/works/10.1016%2FS0076-6879%2895%2961014-6

7 January 2021

The automated chemical synthesis of long oligoribuncleotides using 2'-O-silylated ribonucleoside 3'-O-phosphoramidites on a controlled-pore glass support: synthesis of a 43-nucleotide sequence similar to the 3'-half molecule of an Escherichia coli fo

1 reference

https://api.crossref.org/works/10.1016%2FS0076-6879%2895%2961014-6

7 January 2021

Synthesis of oligodeoxynucleotides containing 2-thiopyrimidine residues--a new protection scheme

1 reference

https://api.crossref.org/works/10.1016%2FS0076-6879%2895%2961014-6

7 January 2021

Unusual anticodon loop structure found in E.coli lysine tRNA.

1 reference

https://api.crossref.org/works/10.1016%2FS0076-6879%2895%2961014-6

7 January 2021

NMR studies of ion binding to Escherichia coli tRNAPhe.

1 reference

https://api.crossref.org/works/10.1016%2FS0076-6879%2895%2961014-6

7 January 2021

Biostructural chemistry of magnesium ion: characterization of the weak binding sites on tRNA(Phe)(yeast). Implications for conformational change and activity

1 reference

https://api.crossref.org/works/10.1016%2FS0076-6879%2895%2961014-6

7 January 2021

Nucleoside modifications stabilize Mg2+ binding in Escherichia coli tRNA(Val): an imino proton NMR investigation.

1 reference

https://api.crossref.org/works/10.1016%2FS0076-6879%2895%2961014-6

7 January 2021

RNA - ligand interactions:(I) magnesium binding sites in yeast tRNAPhe

1 reference

https://api.crossref.org/works/10.1016%2FS0076-6879%2895%2961014-6

7 January 2021

Manganese(II) as a paramagnetic probe of the tertiary structure of transfer RNA

1 reference

https://api.crossref.org/works/10.1016%2FS0076-6879%2895%2961014-6

7 January 2021

Letter: Paramagnetic rare earth ion probes of transfer ribonucleic acid structure

1 reference

https://api.crossref.org/works/10.1016%2FS0076-6879%2895%2961014-6

7 January 2021

Europium as a fluorescent probe of transfer RNA structure

1 reference

https://api.crossref.org/works/10.1016%2FS0076-6879%2895%2961014-6

7 January 2021

Determination of nucleic acid backbone conformation by 1H NMR

1 reference

https://api.crossref.org/works/10.1016%2FS0076-6879%2895%2961014-6

7 January 2021

A frequency-time domain 3D COSY-J technique for measurement of1H−31P coupling constants in oligonucleotides

1 reference

https://api.crossref.org/works/10.1016%2FS0076-6879%2895%2961014-6

7 January 2021

Two-dimensional hetero-TOCSY-NOESY. Correlation of phosphorus-31 resonances with anomeric and aromatic proton resonances in RNA

1 reference

https://api.crossref.org/works/10.1016%2FS0076-6879%2895%2961014-6

7 January 2021

Magnetic resonance studies of the conformation of enzyme-bound adenylyl(3' → 5')uridine and adenosine 5'-triphosphate on RNA polymerase from Escherichia coli

1 reference

https://api.crossref.org/works/10.1016%2FS0076-6879%2895%2961014-6

7 January 2021

Errors in RNA NOESY distance measurements in chimeric and hybrid duplexes: differences in RNA and DNA proton relaxation

1 reference

https://api.crossref.org/works/10.1016%2FS0076-6879%2895%2961014-6

7 January 2021

Conformational analysis of the deoxyribofuranose ring in DNA by means of sums of proton-proton coupling constants: a graphical method

1 reference

https://api.crossref.org/works/10.1016%2FS0076-6879%2895%2961014-6

7 January 2021

Predicting the three-dimensional folding of transfer RNA with a computer modeling protocol

1 reference

https://api.crossref.org/works/10.1016%2FS0076-6879%2895%2961014-6

7 January 2021

Torsion angle approach to nucleic acid distance geometry: TANDY

1 reference

https://api.crossref.org/works/10.1016%2FS0076-6879%2895%2961014-6

7 January 2021

The combination of symbolic and numerical computation for three-dimensional modeling of RNA.

1 reference

https://api.crossref.org/works/10.1016%2FS0076-6879%2895%2961014-6

7 January 2021

CHARMM: A program for macromolecular energy, minimization, and dynamics calculations

1 reference

https://api.crossref.org/works/10.1016%2FS0076-6879%2895%2961014-6

7 January 2021

The crystal and molecular structure of 6-thioguanine

1 reference

https://api.crossref.org/works/10.1016%2FS0076-6879%2895%2961014-6

7 January 2021

An all atom force field for simulations of proteins and nucleic acids

1 reference

https://api.crossref.org/works/10.1016%2FS0076-6879%2895%2961014-6

7 January 2021

Conformational transitions using molecular dynamics with minimum biasing.

1 reference

https://api.crossref.org/works/10.1016%2FS0076-6879%2895%2961014-6

7 January 2021

Free energy via molecular simulation: applications to chemical and biomolecular systems

1 reference

https://api.crossref.org/works/10.1016%2FS0076-6879%2895%2961014-6

7 January 2021

Structure of the ribotrinucleoside diphosphate codon UpUpC bound to tRNAPhe from yeast. A time-dependent transferred nuclear Overhauser enhancement study.

1 reference

https://api.crossref.org/works/10.1016%2FS0076-6879%2895%2961014-6

7 January 2021

Nuclear magnetic resonance study of the codon-anticodon interaction in Bombyx mori tRNA(GCCGly).

1 reference

https://api.crossref.org/works/10.1016%2FS0076-6879%2895%2961014-6

7 January 2021

10.1016/S0076-6879(95)61014-6

Identifiers

DOI

1 reference

6 December 2017

1 reference

PubMed ID

8569499