(Q44919990)

7 December 2017

title

The core of chloroplast nucleoids contains architectural SWIB domain proteins (English)

1 reference

7 December 2017

2

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7 December 2017

4

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7 December 2017

Joanna Melonek

1

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7 December 2017

Mirl Trösch

series ordinal

3

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7 December 2017

Karin Krupinska

series ordinal

5

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7 December 2017

publication date

12 July 2012

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7 December 2017

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7 December 2017

volume

24

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7 December 2017

issue

7

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7 December 2017

page(s)

3060-3073

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Regulation of energy transfer by cations and protein phosphorylation in relation to thylakoid membrane organisation

7 December 2017

cites work

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27 August 2018

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27 August 2018

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27 August 2018

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27 August 2018

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Whirly1 in chloroplasts associates with intron containing RNAs and rarely co-localizes with nucleoids.

27 August 2018

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Low-complexity regions within protein sequences have position-dependent roles

27 August 2018

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Analysis of oligomeric protein complexes in the chloroplast sub-proteome of nucleic acid-binding proteins from mustard reveals potential redox regulators of plastid gene expression.

27 August 2018

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A divalent switch drives H-NS/DNA-binding conformations between stiffening and bridging modes.

27 August 2018

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The proteome map of spinach leaf peroxisomes indicates partial compartmentalization of phylloquinone (vitamin K1) biosynthesis in plant peroxisomes

27 August 2018

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27 August 2018

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Salt stress-induced alterations in the root proteome of barley genotypes with contrasting response towards salinity

27 August 2018

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Whirly proteins maintain plastid genome stability in Arabidopsis.

27 August 2018

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Subcellular localization of rice histone deacetylases in organelles.

27 August 2018

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ATXR5 and ATXR6 are H3K27 monomethyltransferases required for chromatin structure and gene silencing.

27 August 2018

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Dynamics of the bacterial SMC complex and SMC-like proteins involved in DNA repair

27 August 2018

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Nuclear regulators with a second home in organelles.

27 August 2018

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Single-stranded DNA-binding protein Whirly1 in barley leaves is located in plastids and the nucleus of the same cell

27 August 2018

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A member of the Whirly family is a multifunctional RNA- and DNA-binding protein that is essential for chloroplast biogenesis

27 August 2018

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3426132

HU binds and folds single-stranded DNA.

27 August 2018

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3426132

The layered structure of human mitochondrial DNA nucleoids

27 August 2018

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3426132

The Arabidopsis Information Resource (TAIR): gene structure and function annotation.

27 August 2018

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Clustal W and Clustal X version 2.0

27 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3426132

Comparative survey of plastid and mitochondrial targeting properties of transcription factors in Arabidopsis and rice.

27 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3426132

SWI/SNF chromatin remodeling and linker histones in plants

27 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3426132

Optical manipulation reveals strong attracting forces at membrane contact sites between endoplasmic reticulum and chloroplasts

27 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3426132

The architectural role of nucleoid-associated proteins in the organization of bacterial chromatin: a molecular perspective.

27 August 2018

1 reference

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Two cell-cycle regulated SET-domain proteins interact with proliferating cell nuclear antigen (PCNA) in Arabidopsis.

27 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3426132

Plastid transcription activity and DNA copy number increase early in barley chloroplast development

27 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3426132

Effect of Salts and Electron Transport on the Conformation of Isolated Chloroplasts. II. Electron Microscopy

27 August 2018

1 reference

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Proteome analysis of the rice etioplast: metabolic and regulatory networks and novel protein functions

27 August 2018

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Visualization of plastid nucleoids in situ using the PEND-GFP fusion protein.

27 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3426132

DNA bridging: a property shared among H-NS-like proteins

27 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3426132

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27 August 2018

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Organelle nuclei in higher plants: structure, composition, function, and evolution.

27 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3426132

The DNA binding protein H-NS binds to and alters the stability of RNA in vitro and in vivo

27 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3426132

The SANT domain: a unique histone-tail-binding module?

27 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3426132

The Arabidopsis thaliana chloroplast proteome reveals pathway abundance and novel protein functions.

27 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3426132

The C-terminal domain is the primary determinant of histone H1 binding to chromatin in vivo

27 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3426132

Organization, developmental dynamics, and evolution of plastid nucleoids.

27 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3426132

MFP1 is a thylakoid-associated, nucleoid-binding protein with a coiled-coil structure

27 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3426132

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27 August 2018

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3426132

Histone-like proteins of the dinoflagellate Crypthecodinium cohnii have homologies to bacterial DNA-binding proteins

27 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3426132

Regulation of gene expression by histone-like proteins in bacteria.

27 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3426132

Eukaryotic genome evolution: rearrangement and coevolution of compartmentalized genetic information

27 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3426132

The SWIB and the MDM2 domains are homologous and share a common fold

27 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3426132

The bacterial histone-like protein HU specifically recognizes similar structures in all nucleic acids. DNA, RNA, and their hybrids

27 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3426132

Reversible DNA compaction by sulfite reductase regulates transcriptional activity of chloroplast nucleoids

27 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3426132

Large-scale monitoring of pleiotropic regulation of gene expression by the prokaryotic nucleoid-associated protein, H-NS.

27 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3426132

H-NS and H-NS-like proteins in Gram-negative bacteria and their multiple role in the regulation of bacterial metabolism

27 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3426132

Cytogenomic analyses reveal the structural plasticity of the chloroplast genome in higher plants

27 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3426132

Arabidopsis transcription factors: genome-wide comparative analysis among eukaryotes

27 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3426132

Predicting subcellular localization of proteins based on their N-terminal amino acid sequence

27 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3426132

SAP - a putative DNA-binding motif involved in chromosomal organization

27 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3426132

The 68 kDa DNA compacting nucleoid protein from soybean chloroplasts inhibits DNA synthesis in vitro.

27 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3426132

Lac and lambda repressors relieve silencing of the Escherichia coli bgl promoter. Activation by alteration of a repressing nucleoprotein complex

27 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3426132

Endogenous fluctuations of DNA topology in the chloroplast of Chlamydomonas reinhardtii

27 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3426132

Molecular characterization of the PEND protein, a novel bZIP protein present in the envelope membrane that is the site of nucleoid replication in developing plastids

27 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3426132

The division apparatus of plastids and mitochondria

27 August 2018

1 reference

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A novel protein with DNA binding activity from tobacco chloroplast nucleoids.

27 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3426132

The AP2 domain of APETALA2 defines a large new family of DNA binding proteins in Arabidopsis

27 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3426132

Transcriptionally active chromosomes (TACs) of barley chloroplasts contain the alpha-subunit of plastome-encoded RNA polymerase

27 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3426132

Essential role of Swp73p in the function of yeast Swi/Snf complex

27 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3426132

Silencing of Escherichia coli bgl promoter by flanking sequence elements.

27 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3426132

The APETALA2 domain is related to a novel type of DNA binding domain.

27 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3426132

A method for the quantitative recovery of protein in dilute solution in the presence of detergents and lipids

27 August 2018

1 reference

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H1a, an E. coli DNA-binding protein which accumulates in stationary phase, strongly compacts DNA in vitro

27 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3426132

Cleavage of Structural Proteins during the Assembly of the Head of Bacteriophage T4

27 August 2018

1 reference

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Isolation and properties of the envelope of spinach chloroplasts

27 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3426132

The neighbor-joining method: a new method for reconstructing phylogenetic trees

27 August 2018

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Beta-glucoside (bgl) operon of Escherichia coli K-12: nucleotide sequence, genetic organization, and possible evolutionary relationship to regulatory components of two Bacillus subtilis genes

27 August 2018

1 reference

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A physiological role for DNA supercoiling in the osmotic regulation of gene expression in S. typhimurium and E. coli

27 August 2018

1 reference

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Chloroplast gene expression and promoter identification in chloroplast extracts

27 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3426132

Chlamydia trachomatis developmentally regulated protein is homologous to eukaryotic histone H1

27 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3426132

Nucleoid condensation in Escherichia coli that express a chlamydial histone homolog.

27 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3426132

Lethal overproduction of the Escherichia coli nucleoid protein H-NS: ultramicroscopic and molecular autopsy

27 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3426132

A rapid and sensitive method for the quantitation of microgram quantities of protein utilizing the principle of protein-dye binding

27 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3426132

The Major Architects of Chromatin: Architectural Proteins in Bacteria, Archaea and Eukaryotes

27 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3426132

pTAC2, -6, and -12 are components of the transcriptionally active plastid chromosome that are required for plastid gene expression

1 December 2018

1 reference

12 December 2020

Protease activity of CND41, a chloroplast nucleoid DNA-binding protein, isolated from cultured tobacco cells

1 reference

12 December 2020

Two birds with one stone: genes that encode products targeted to two or more compartments

1 reference

12 December 2020

Dissociation of RNA-histone complexes by DNA

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12 December 2020

Hybrid genes in the analysis of transformation conditions : I. Setting up a simple method for direct gene transfer in plant protoplasts

1 reference

12 December 2020

Isolation of a transcriptionally active chromosome from chloroplasts of Euglena gracilis

1 reference

12 December 2020

Circular nucleoids isolated from chloroplasts in a brown alga Ectocarpus siliculosus

1 reference

12 December 2020

Functional analysis of two maize cDNAs encoding T7-like RNA polymerases

1 reference

12 December 2020

Identifiers

DOI

10.1105/TPC.112.099721

1 reference

7 December 2017

0 references

1 reference