(Q45299074)

11 December 2017

Tertiary endosymbiosis driven genome evolution in dinoflagellate algae (English)

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11 December 2017

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3

Frances M Van Dolah

1 reference

11 December 2017

Debashish Bhattacharya

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6

object named as

Debashish Bhattacharya

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11 December 2017

2

Jeremiah D Hackett

1 reference

11 December 2017

Hwan Su Yoon

1

1 reference

11 December 2017

Tetyana Nosenko

series ordinal

4

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11 December 2017

Kristy L Lidie

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5

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11 December 2017

2 March 2005

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Molecular Biology and Evolution

11 December 2017

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11 December 2017

22

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11 December 2017

5

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11 December 2017

1299-1308

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Dinoflagellate expressed sequence tag data indicate massive transfer of chloroplast genes to the nuclear genome

11 December 2017

1 reference

https://api.crossref.org/works/10.1093%2FMOLBEV%2FMSI118

A kingdom-level phylogeny of eukaryotes based on combined protein data

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FMOLBEV%2FMSI118

Minicircular plastid DNA in the dinoflagellate Amphidinium operculatum.

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FMOLBEV%2FMSI118

The actin gene of the glaucocystophyte Cyanophora paradoxa: analysis of the coding region and introns, and an actin phylogeny of eukaryotes.

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FMOLBEV%2FMSI118

Photosynthetic eukaryotes unite: endosymbiosis connects the dots

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FMOLBEV%2FMSI118

Normalization and subtraction: two approaches to facilitate gene discovery

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FMOLBEV%2FMSI118

Principles of protein and lipid targeting in secondary symbiogenesis: euglenoid, dinoflagellate, and sporozoan plastid origins and the eukaryote family tree

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FMOLBEV%2FMSI118

Membrane heredity and early chloroplast evolution

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FMOLBEV%2FMSI118

Ribosomal RNA analysis indicates a benthic pennate diatom ancestry for the endosymbionts of the dinoflagellates Peridinium foliaceum and Peridinium balticum (Pyrrhophyta).

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FMOLBEV%2FMSI118

Phylogeny of some of the major genera of dinoflagellates based on ultrastructure and partial LSU rDNA sequence data, including the erection of three new genera of unarmoured dinoflagellates

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FMOLBEV%2FMSI118

A phylogenetic assessment of the eukaryotic light-harvesting antenna proteins, with implications for plastid evolution

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FMOLBEV%2FMSI118

Nuclear-encoded, plastid-targeted genes suggest a single common origin for apicomplexan and dinoflagellate plastids.

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FMOLBEV%2FMSI118

Ribosomal RNA sequences of Sarcocystis muris, Theileria annulata and Crypthecodinium cohnii reveal evolutionary relationships among apicomplexans, dinoflagellates, and ciliates

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FMOLBEV%2FMSI118

Likelihood-based tests of topologies in phylogenetics

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FMOLBEV%2FMSI118

The endosymbiont hypothesis revisited

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FMOLBEV%2FMSI118

A Simple, Fast, and Accurate Algorithm to Estimate Large Phylogenies by Maximum Likelihood

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FMOLBEV%2FMSI118

Migration of the plastid genome to the nucleus in a peridinin dinoflagellate.

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FMOLBEV%2FMSI118

Comparative analysis of the complete plastid genome sequence of the red alga Gracilaria tenuistipitata var. liui provides insights into the evolution of rhodoplasts and their relationship to other plastids

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FMOLBEV%2FMSI118

Nucleus-encoded, plastid-targeted glyceraldehyde-3-phosphate dehydrogenase (GAPDH) indicates a single origin for chromalveolate plastids

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FMOLBEV%2FMSI118

Evolution of the chloroplast genome

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FMOLBEV%2FMSI118

MRBAYES: Bayesian inference of phylogenetic trees

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FMOLBEV%2FMSI118

Phylogenetic artifacts can be caused by leucine, serine, and arginine codon usage heterogeneity: dinoflagellate plastid origins as a case study

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FMOLBEV%2FMSI118

Second- and third-hand chloroplasts in dinoflagellates: phylogeny of oxygen-evolving enhancer 1 (PsbO) protein reveals replacement of a nuclear-encoded plastid gene by that of a haptophyte tertiary endosymbiont

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FMOLBEV%2FMSI118

A new approach to protein fold recognition

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FMOLBEV%2FMSI118

A plastid of probable green algal origin in Apicomplexan parasites.

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FMOLBEV%2FMSI118

Dinoflagellate chloroplasts--where have all the genes gone?

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FMOLBEV%2FMSI118

Plastid-derived single gene minicircles of the dinoflagellate Ceratium horridum are localized in the nucleus

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FMOLBEV%2FMSI118

Gene expression in Florida red tide dinoflagellate Karenia brevis: analysis of an expressed sequence tag library and development of DNA microarray

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FMOLBEV%2FMSI118

Genome sequence of the ultrasmall unicellular red alga Cyanidioschyzon merolae 10D

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FMOLBEV%2FMSI118

The origin of red algae and the evolution of chloroplasts.

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FMOLBEV%2FMSI118

The phylogenetic position of red algae revealed by multiple nuclear genes from mitochondria-containing eukaryotes and an alternative hypothesis on the origin of plastids.

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FMOLBEV%2FMSI118

The general stochastic model of nucleotide substitution

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FMOLBEV%2FMSI118

The complete mitochondrial genome sequence of the haptophyte Emiliania huxleyi and its relation to heterokonts

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FMOLBEV%2FMSI118

TREE-PUZZLE: maximum likelihood phylogenetic analysis using quartets and parallel computing

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FMOLBEV%2FMSI118

Dinophyte chloroplasts and phylogeny - A review

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FMOLBEV%2FMSI118

CONSEL: for assessing the confidence of phylogenetic tree selection

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FMOLBEV%2FMSI118

Phylogenetic analysis of eukaryotes using heat-shock protein Hsp90.

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FMOLBEV%2FMSI118

Symbiotic origin of a novel actin gene in the cryptophyte Pyrenomonas helgolandii

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FMOLBEV%2FMSI118

Phylogeny of nuclear-encoded plastid-targeted GAPDH gene supports separate origins for the peridinin- and the fucoxanthin derivative-containing plastids of dinoflagellates

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FMOLBEV%2FMSI118

Phylogenetic analyses indicate that the 19'Hexanoyloxy-fucoxanthin-containing dinoflagellates have tertiary plastids of haptophyte origin

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FMOLBEV%2FMSI118

Evolutionary relationships among the eukaryotic crown taxa taking into account site-to-site rate variation in 18S rRNA.

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FMOLBEV%2FMSI118

A general empirical model of protein evolution derived from multiple protein families using a maximum-likelihood approach

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FMOLBEV%2FMSI118

Complete gene map of the plastid-like DNA of the malaria parasite Plasmodium falciparum

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FMOLBEV%2FMSI118

PAML: a program package for phylogenetic analysis by maximum likelihood

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FMOLBEV%2FMSI118

A single origin of the peridinin- and fucoxanthin-containing plastids in dinoflagellates through tertiary endosymbiosis

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FMOLBEV%2FMSI118

A molecular timeline for the origin of photosynthetic eukaryotes

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FMOLBEV%2FMSI118

The single, ancient origin of chromist plastids

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FMOLBEV%2FMSI118

Evolution of dinoflagellate unigenic minicircles and the partially concerted divergence of their putative replicon origins.

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FMOLBEV%2FMSI118

Single gene circles in dinoflagellate chloroplast genomes.

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FMOLBEV%2FMSI118

Evolutionary pathway of the apicomplexan plastids and its implications

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FMOLBEV%2FMSI118

Response from McFadden and Waller

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FMOLBEV%2FMSI118

Plastid ultrastructure defines the protein import pathway in dinoflagellates

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FMOLBEV%2FMSI118

21 January 2018

Identifiers

DOI

10.1093/MOLBEV/MSI118

1 reference

11 December 2017

1 reference