(Q45407028)

14 December 2017

A parsimonious model of lineage-specific expansion of MADS-box genes in Physcomitrella patens (English)

1 reference

14 December 2017

Physcomitrella patens

object named as

Physcomitrella patens

1 reference

E I Barker

1

1 reference

PubMed ID

23525745

14 December 2017

N W Ashton

series ordinal

2

1 reference

14 December 2017

23 March 2013

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14 December 2017

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14 December 2017

32

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14 December 2017

8

1 reference

14 December 2017

1161-1177

1 reference

MIKC* MADS domain heterodimers are required for pollen maturation and tube growth in Arabidopsis.

14 December 2017

1 reference

https://api.crossref.org/works/10.1007%2FS00299-013-1411-8

Basic local alignment search tool

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00299-013-1411-8

An ancestral MADS-box gene duplication occurred before the divergence of plants and animals

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00299-013-1411-8

The Selaginella genome identifies genetic changes associated with the evolution of vascular plants

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00299-013-1411-8

The major clades of MADS-box genes and their role in the development and evolution of flowering plants.

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00299-013-1411-8

The MADS domain protein DIANA acts together with AGAMOUS-LIKE80 to specify the central cell in Arabidopsis ovules

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00299-013-1411-8

An atlas of type I MADS box gene expression during female gametophyte and seed development in Arabidopsis

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00299-013-1411-8

The gene balance hypothesis: from classical genetics to modern genomics

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00299-013-1411-8

Widespread paleopolyploidy in model plant species inferred from age distributions of duplicate genes

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00299-013-1411-8

An exact nonparametric method for inferring mosaic structure in sequence triplets

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00299-013-1411-8

The war of the whorls: genetic interactions controlling flower development

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00299-013-1411-8

The petunia MADS box gene FBP11 determines ovule identity

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00299-013-1411-8

AGL23, a type I MADS-box gene that controls female gametophyte and embryo development in Arabidopsis.

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00299-013-1411-8

Unexpected complexity of the aquaporin gene family in the moss Physcomitrella patens

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00299-013-1411-8

Genomewide structural annotation and evolutionary analysis of the type I MADS-box genes in plants.

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00299-013-1411-8

And then there were many: MADS goes genomic

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00299-013-1411-8

Transcript profiling of transcription factor genes during silique development in Arabidopsis.

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00299-013-1411-8

Robustness and evolution: concepts, insights and challenges from a developmental model system

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00299-013-1411-8

The embryo MADS domain factor AGL15 acts postembryonically. Inhibition of perianth senescence and abscission via constitutive expression.

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00299-013-1411-8

Chromosomal mapping of the MADS-box multigene family inZea maysreveals dispersed distribution of allelic genes as well as transposed copies

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00299-013-1411-8

ExPASy: The proteomics server for in-depth protein knowledge and analysis

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00299-013-1411-8

Sister-scanning: a Monte Carlo procedure for assessing signals in recombinant sequences

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00299-013-1411-8

A hitchhiker's guide to the MADS world of plants

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00299-013-1411-8

Selaginella Genome Analysis - Entering the "Homoplasy Heaven" of the MADS World

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00299-013-1411-8

Role of duplicate genes in genetic robustness against null mutations

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00299-013-1411-8

A Simple, Fast, and Accurate Algorithm to Estimate Large Phylogenies by Maximum Likelihood

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00299-013-1411-8

Characterization of MADS homeotic genes in the fern Ceratopteris richardii

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00299-013-1411-8

Symbiotic induction of a MADS-box gene during development of alfalfa root nodules

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00299-013-1411-8

Evolutionary diversity of symbiotically induced nodule MADS box genes: characterization of nmhC5, a member of a novel subfamily

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00299-013-1411-8

Recombination patterns in aphthoviruses mirror those found in other picornaviruses

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00299-013-1411-8

Two ancient classes of MIKC-type MADS-box genes are present in the moss Physcomitrella patens

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00299-013-1411-8

MRBAYES: Bayesian inference of phylogenetic trees

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00299-013-1411-8

The AGL62 MADS domain protein regulates cellularization during endosperm development in Arabidopsis

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00299-013-1411-8

MIKC-type MADS-domain proteins: structural modularity, protein interactions and network evolution in land plants

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00299-013-1411-8

The Polycomb-group protein MEDEA regulates seed development by controlling expression of the MADS-box gene PHERES1.

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00299-013-1411-8

A common framework for understanding the origin of genetic dominance and evolutionary fates of gene duplications

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00299-013-1411-8

How MIKC* MADS-box genes originated and evidence for their conserved function throughout the evolution of vascular plant gametophytes.

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00299-013-1411-8

Gene duplication and loss in a MADS box gene transcription factor circuit.

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00299-013-1411-8

Expression of MADS-box genes during the embryonic phase in Arabidopsis.

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00299-013-1411-8

The evolutionary fate and consequences of duplicate genes

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00299-013-1411-8

AGL1-AGL6, an Arabidopsis gene family with similarity to floral homeotic and transcription factor genes

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00299-013-1411-8

RDP: detection of recombination amongst aligned sequences

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00299-013-1411-8

A Modified Bootscan Algorithm for Automated Identification of Recombinant Sequences and Recombination Breakpoints

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00299-013-1411-8

Molecular population genetics of redundant floral-regulatory genes in Arabidopsis thaliana

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00299-013-1411-8

Floral homeotic genes were recruited from homologous MADS-box genes preexisting in the common ancestor of ferns and seed plants

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00299-013-1411-8

The tiny eukaryote Ostreococcus provides genomic insights into the paradox of plankton speciation

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00299-013-1411-8

Molecular and phylogenetic analyses of the complete MADS-box transcription factor family in Arabidopsis: new openings to the MADS world.

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00299-013-1411-8

Gene family analysis of the Arabidopsis pollen transcriptome reveals biological implications for cell growth, division control, and gene expression regulation.

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00299-013-1411-8

AGL80 is required for central cell and endosperm development in Arabidopsis.

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00299-013-1411-8

jModelTest: phylogenetic model averaging

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00299-013-1411-8

MODELTEST: testing the model of DNA substitution

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00299-013-1411-8

Evaluation of methods for detecting recombination from DNA sequences: computer simulations

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00299-013-1411-8

The MADS-domain protein PPM2 preferentially occurs in gametangia and sporophytes of the moss Physcomitrella patens

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00299-013-1411-8

Protein encoding genes in an ancient plant: analysis of codon usage, retained genes and splice sites in a moss, Physcomitrella patens

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00299-013-1411-8

An ancient genome duplication contributed to the abundance of metabolic genes in the moss Physcomitrella patens

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00299-013-1411-8

The Physcomitrella Genome Reveals Evolutionary Insights into the Conquest of Land by Plants

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00299-013-1411-8

Isolation and characterization of new MIKC*-Type MADS-box genes from the moss Physcomitrella patens.

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00299-013-1411-8

Evolutionary complexity of MADS complexes

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00299-013-1411-8

MrBayes 3: Bayesian phylogenetic inference under mixed models

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00299-013-1411-8

Molecular evidence on plant divergence times

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00299-013-1411-8

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00299-013-1411-8

Clues about the ancestral roles of plant MADS-box genes from a functional analysis of moss homologues.

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00299-013-1411-8

AGL61 interacts with AGL80 and is required for central cell development in Arabidopsis.

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00299-013-1411-8

The LAMB1 gene from the clubmoss, Lycopodium annotinum, is a divergent MADS-box gene, expressed specifically in sporogenic structures

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00299-013-1411-8

Characterization of MADS-box genes in charophycean green algae and its implication for the evolution of MADS-box genes

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00299-013-1411-8

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00299-013-1411-8

Plant biology. Floral quartets.

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00299-013-1411-8

Development of floral organ identity: stories from the MADS house

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00299-013-1411-8

A short history of MADS-box genes in plants.

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00299-013-1411-8

CLUSTAL W: improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00299-013-1411-8

MIKC* MADS-protein complexes bind motifs enriched in the proximal region of late pollen-specific Arabidopsis promoters.

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00299-013-1411-8

MADS-complexes regulate transcriptome dynamics during pollen maturation

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00299-013-1411-8

Evidence of interaction network evolution by whole-genome duplications: a case study in MADS-box proteins

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00299-013-1411-8

Evolution by gene duplication: an update

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00299-013-1411-8

Dating the early evolution of plants: detection and molecular clock analyses of orthologs.

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00299-013-1411-8

MIKC* MADS-box proteins: conserved regulators of the gametophytic generation of land plants.

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00299-013-1411-8

ngl9: a third MADS box gene expressed in alfalfa root nodules.

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00299-013-1411-8

Day Length and Temperature Strongly Influence Sexual Reproduction and Expression of a Novel MADS-Box Gene in the MossPhyscomitrella patens

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00299-013-1411-8

Preservation of duplicate genes by complementary, degenerative mutations

21 January 2018

1 reference

12 December 2020

Analyzing the mosaic structure of genes

1 reference

12 December 2020

Statistical tests for detecting gene conversion.

1 reference

12 December 2020

Evolution and divergence of the MADS-box gene family based on genome-wide expression analyses

1 reference

12 December 2020

Possible emergence of new geminiviruses by frequent recombination

1 reference

12 December 2020

10.1007/S00299-013-1411-8

Identifiers

DOI

1 reference

14 December 2017

1 reference

PubMed ID

23525745