(Q45852371)

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23184816%20AND%20SRC:MED&resulttype=core&format=json

18 February 2020

title

Lipid A from lipopolysaccharide recognition: structure, dynamics and cooperativity by molecular dynamics simulations (English)

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23184816%20AND%20SRC:MED&resulttype=core&format=json

18 February 2020

1 reference

2

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23184816%20AND%20SRC:MED&resulttype=core&format=json

18 February 2020

Jose Antonio Garate

series ordinal

1

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23184816%20AND%20SRC:MED&resulttype=core&format=json

18 February 2020

author name string

Jose Antonio Garate

series ordinal

1

1 reference

16 December 2017

http://europepmc.org/abstract/MED/23184816

language of work or name

English

0 references

publication date

15 January 2013

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23184816%20AND%20SRC:MED&resulttype=core&format=json

18 February 2020

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https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23184816%20AND%20SRC:MED&resulttype=core&format=json

18 February 2020

volume

81

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23184816%20AND%20SRC:MED&resulttype=core&format=json

18 February 2020

issue

4

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23184816%20AND%20SRC:MED&resulttype=core&format=json

18 February 2020

page(s)

658-674

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https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23184816%20AND%20SRC:MED&resulttype=core&format=json

describes a project that uses

18 February 2020

molecular dynamics simulation

1 reference

based on heuristic

inferred from title

cites work

Cyanobacterial lipopolysaccharides and human health - a review

1 reference

https://api.crossref.org/works/10.1002%2FPROT.24223

Innate immune sensing and its roots: the story of endotoxin

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FPROT.24223

Lipopolysaccharide endotoxins

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FPROT.24223

Approaching the asymptote? Evolution and revolution in immunology

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FPROT.24223

The structural basis of lipopolysaccharide recognition by the TLR4-MD-2 complex

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FPROT.24223

Crystal structure of the TLR4-MD-2 complex with bound endotoxin antagonist Eritoran

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FPROT.24223

A human homologue of the Drosophila Toll protein signals activation of adaptive immunity

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FPROT.24223

ML -- a conserved domain involved in innate immunity and lipid metabolism

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FPROT.24223

Crystal structures of human MD-2 and its complex with antiendotoxic lipid IVa

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FPROT.24223

Structure and function of lipopolysaccharide binding protein

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FPROT.24223

CD14, a receptor for complexes of lipopolysaccharide (LPS) and LPS binding protein

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FPROT.24223

MD-2: the Toll 'gatekeeper' in endotoxin signalling

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FPROT.24223

MD-2, a molecule that confers lipopolysaccharide responsiveness on Toll-like receptor 4

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FPROT.24223

Elucidation of the MD-2/TLR4 interface required for signaling by lipid IVa.

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FPROT.24223

Regulatory roles for MD-2 and TLR4 in ligand-induced receptor clustering

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FPROT.24223

Defective LPS Signaling in C3H/HeJ and C57BL/10ScCr Mice: Mutations in Tlr4 Gene

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FPROT.24223

Endotoxin-tolerant mice have mutations in Toll-like receptor 4 (Tlr4)

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FPROT.24223

Pathogen recognition and innate immunity

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FPROT.24223

Molecular basis of reduced potency of underacylated endotoxins

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FPROT.24223

Hexa-acylation and KDO(2)-glycosylation determine the specific immunostimulatory activity of Neisseria meningitidis lipid A for human monocyte derived dendritic cells.

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FPROT.24223

MD-2-dependent pulmonary immune responses to inhaled lipooligosaccharides: effect of acylation state

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FPROT.24223

A synthetic lipid A mimetic modulates human TLR4 activity

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FPROT.24223

Inhibition of endotoxin response by e5564, a novel Toll-like receptor 4-directed endotoxin antagonist

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FPROT.24223

Myeloid differentiation 2 as a therapeutic target of inflammatory disorders

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FPROT.24223

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FPROT.24223

Taxanes inhibit human TLR4 signaling by binding to MD-2.

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FPROT.24223

Free thiol group of MD-2 as the target for inhibition of the lipopolysaccharide-induced cell activation

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FPROT.24223

MD-2 as the target of curcumin in the inhibition of response to LPS.

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FPROT.24223

Xanthohumol and related prenylated flavonoids inhibit inflammatory cytokine production in LPS-activated THP-1 monocytes: structure-activity relationships and in silico binding to myeloid differentiation protein-2 (MD-2).

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FPROT.24223

The vaccine adjuvant monophosphoryl lipid A as a TRIF-biased agonist of TLR4.

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FPROT.24223

Putting endotoxin to work for us: monophosphoryl lipid A as a safe and effective vaccine adjuvant

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FPROT.24223

Computer simulation of the rough lipopolysaccharide membrane of Pseudomonas aeruginosa

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FPROT.24223

From agonist to antagonist: structure and dynamics of innate immune glycoprotein MD-2 upon recognition of variably acylated bacterial endotoxins

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FPROT.24223

The Protein Data Bank: a computer-based archival file for macromolecular structures

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FPROT.24223

All-atom empirical potential for molecular modeling and dynamics studies of proteins

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FPROT.24223

CHARMM Additive All-Atom Force Field for Glycosidic Linkages between Hexopyranoses

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FPROT.24223

Additive empirical force field for hexopyranose monosaccharides

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FPROT.24223

Update of the CHARMM all-atom additive force field for lipids: validation on six lipid types

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FPROT.24223

Comparison of simple potential functions for simulating liquid water

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FPROT.24223

VMD: visual molecular dynamics

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FPROT.24223

PACKMOL: a package for building initial configurations for molecular dynamics simulations.

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FPROT.24223

Scalable molecular dynamics with NAMD

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FPROT.24223

Numerical integration of the cartesian equations of motion of a system with constraints: molecular dynamics of n-alkanes

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FPROT.24223

Ligand binding affinities from MD simulations.

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FPROT.24223

Dictionary of protein secondary structure: pattern recognition of hydrogen-bonded and geometrical features

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FPROT.24223

MD-2-mediated ionic interactions between lipid A and TLR4 are essential for receptor activation

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FPROT.24223

Lipopolysaccharide interaction with cell surface Toll-like receptor 4-MD-2: higher affinity than that with MD-2 or CD14.

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FPROT.24223

Isolation of an endotoxin-MD-2 complex that produces Toll-like receptor 4-dependent cell activation at picomolar concentrations

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FPROT.24223

Particle mesh Ewald: An N⋅log(N) method for Ewald sums in large systems

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FPROT.24223

Molecular mechanisms of endotoxin activity

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FPROT.24223

21 January 2018

Identifiers

DOI

10.1002/PROT.24223

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23184816%20AND%20SRC:MED&resulttype=core&format=json

18 February 2020

1 reference