(Q45909952)

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Combined transcriptome, genetic diversity and metabolite profiling in tomato fruit reveals that the ethylene response factor SlERF6 plays an important role in ripening and carotenoid accumulation.

scientific article published on 5 January 2012

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17 January 2020

Combined transcriptome, genetic diversity and metabolite profiling in tomato fruit reveals that the ethylene response factor SlERF6 plays an important role in ripening and carotenoid accumulation (English)

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17 January 2020

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17 January 2020

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17 January 2020

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Je-Gun Joung

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17 January 2020

Mi-Young Chung

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17 January 2020

Zhangjun Fei

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17 January 2020

Denise Tieman

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17 January 2020

Harry Klee

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17 January 2020

James Giovannoni

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17 January 2020

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5 January 2012

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17 January 2020

The Plant Journal

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17 January 2020

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17 January 2020

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17 January 2020

191-204

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17 January 2020

Transcriptome and selected metabolite analyses reveal multiple points of ethylene control during tomato fruit development.

1 reference

https://api.crossref.org/works/10.1111%2FJ.1365-313X.2011.04863.X

21 January 2018

Differential expression of the 1-aminocyclopropane-1-carboxylate oxidase gene family of tomato

1 reference

https://api.crossref.org/works/10.1111%2FJ.1365-313X.2011.04863.X

21 January 2018

The regulation of 1-aminocyclopropane-1-carboxylic acid synthase gene expression during the transition from system-1 to system-2 ethylene synthesis in tomato

1 reference

https://api.crossref.org/works/10.1111%2FJ.1365-313X.2011.04863.X

21 January 2018

Regulation of carotenoid formation during tomato fruit ripening and development

1 reference

https://api.crossref.org/works/10.1111%2FJ.1365-313X.2011.04863.X

21 January 2018

Source to sink: regulation of carotenoid biosynthesis in plants.

1 reference

https://api.crossref.org/works/10.1111%2FJ.1365-313X.2011.04863.X

21 January 2018

Regulation of carotenoid composition and shoot branching in Arabidopsis by a chromatin modifying histone methyltransferase, SDG8.

1 reference

https://api.crossref.org/works/10.1111%2FJ.1365-313X.2011.04863.X

21 January 2018

The complex genetic architecture of the metabolome

1 reference

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21 January 2018

Integration of biological networks and gene expression data using Cytoscape

1 reference

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21 January 2018

Vitamin synthesis in plants: tocopherols and carotenoids

1 reference

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21 January 2018

Strigolactones: discovery of the elusive shoot branching hormone

1 reference

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21 January 2018

Deoxyxylulose phosphate pathway to terpenoids

1 reference

https://api.crossref.org/works/10.1111%2FJ.1365-313X.2011.04863.X

21 January 2018

Metabolic engineering of the mevalonate and non-mevalonate isopentenyl diphosphate-forming pathways for the production of health-promoting isoprenoids in tomato.

1 reference

https://api.crossref.org/works/10.1111%2FJ.1365-313X.2011.04863.X

21 January 2018

Integrative transcript and metabolite analysis of nutritionally enhanced DE-ETIOLATED1 downregulated tomato fruit.

1 reference

https://api.crossref.org/works/10.1111%2FJ.1365-313X.2011.04863.X

21 January 2018

Comprehensive EST analysis of tomato and comparative genomics of fruit ripening

1 reference

https://api.crossref.org/works/10.1111%2FJ.1365-313X.2011.04863.X

21 January 2018

Tomato Functional Genomics Database: a comprehensive resource and analysis package for tomato functional genomics

1 reference

https://api.crossref.org/works/10.1111%2FJ.1365-313X.2011.04863.X

21 January 2018

Natural genetic variation for improving crop quality

1 reference

https://api.crossref.org/works/10.1111%2FJ.1365-313X.2011.04863.X

21 January 2018

The biosynthesis and nutritional uses of carotenoids

1 reference

https://api.crossref.org/works/10.1111%2FJ.1365-313X.2011.04863.X

21 January 2018

Manipulation of phytoene levels in tomato fruit: effects on isoprenoids, plastids, and intermediary metabolism

1 reference

https://api.crossref.org/works/10.1111%2FJ.1365-313X.2011.04863.X

21 January 2018

A variable cluster of ethylene response factor-like genes regulates metabolic and developmental acclimation responses to submergence in rice

1 reference

https://api.crossref.org/works/10.1111%2FJ.1365-313X.2011.04863.X

21 January 2018

A chromoplast-specific carotenoid biosynthesis pathway is revealed by cloning of the tomato white-flower locus

1 reference

https://api.crossref.org/works/10.1111%2FJ.1365-313X.2011.04863.X

21 January 2018

Genetic regulation of fruit development and ripening

1 reference

https://api.crossref.org/works/10.1111%2FJ.1365-313X.2011.04863.X

21 January 2018

Plant volatile compounds: sensory cues for health and nutritional value?

1 reference

https://api.crossref.org/works/10.1111%2FJ.1365-313X.2011.04863.X

21 January 2018

A practical false discovery rate approach to identifying patterns of differential expression in microarray data

1 reference

https://api.crossref.org/works/10.1111%2FJ.1365-313X.2011.04863.X

21 January 2018

Regulation of disease resistance pathways by AP2/ERF transcription factors.

1 reference

https://api.crossref.org/works/10.1111%2FJ.1365-313X.2011.04863.X

21 January 2018

Arabidopsis RAP2.2: an ethylene response transcription factor that is important for hypoxia survival.

1 reference

https://api.crossref.org/works/10.1111%2FJ.1365-313X.2011.04863.X

21 January 2018

Carotenoid biosynthesis in flowering plants

1 reference

https://api.crossref.org/works/10.1111%2FJ.1365-313X.2011.04863.X

21 January 2018

A novel group of transcriptional repressors in Arabidopsis.

1 reference

https://api.crossref.org/works/10.1111%2FJ.1365-313X.2011.04863.X

21 January 2018

Transcriptome and metabolite profiling show that APETALA2a is a major regulator of tomato fruit ripening.

1 reference

https://api.crossref.org/works/10.1111%2FJ.1365-313X.2011.04863.X

21 January 2018

Genetics and control of tomato fruit ripening and quality attributes

1 reference

https://api.crossref.org/works/10.1111%2FJ.1365-313X.2011.04863.X

21 January 2018

Biosynthesis, accumulation and emission of carotenoids, alpha-tocopherol, plastoquinone, and isoprene in leaves under high photosynthetic irradiance

1 reference

https://api.crossref.org/works/10.1111%2FJ.1365-313X.2011.04863.X

21 January 2018

A tomato HD-Zip homeobox protein, LeHB-1, plays an important role in floral organogenesis and ripening

1 reference

https://api.crossref.org/works/10.1111%2FJ.1365-313X.2011.04863.X

21 January 2018

Regulation of gene expression by ethylene during Lycopersicon esculentum (tomato) fruit development

1 reference

https://api.crossref.org/works/10.1111%2FJ.1365-313X.2011.04863.X

21 January 2018

An integrated view of quantitative trait variation using tomato interspecific introgression lines

1 reference

https://api.crossref.org/works/10.1111%2FJ.1365-313X.2011.04863.X

21 January 2018

Manipulation of light signal transduction as a means of modifying fruit nutritional quality in tomato

1 reference

https://api.crossref.org/works/10.1111%2FJ.1365-313X.2011.04863.X

21 January 2018

There is more to tomato fruit colour than candidate carotenoid genes.

1 reference

https://api.crossref.org/works/10.1111%2FJ.1365-313X.2011.04863.X

21 January 2018

Cloning and characterization of a gene from Escherichia coli encoding a transketolase-like enzyme that catalyzes the synthesis of D-1-deoxyxylulose 5-phosphate, a common precursor for isoprenoid, thiamin, and pyridoxol biosynthesis.

1 reference

https://api.crossref.org/works/10.1111%2FJ.1365-313X.2011.04863.X

21 January 2018

Carotenoid biosynthesis during tomato fruit development: regulatory role of 1-deoxy-D-xylulose 5-phosphate synthase.

1 reference

https://api.crossref.org/works/10.1111%2FJ.1365-313X.2011.04863.X

21 January 2018

The cauliflower Or gene encodes a DnaJ cysteine-rich domain-containing protein that mediates high levels of beta-carotene accumulation

1 reference

https://api.crossref.org/works/10.1111%2FJ.1365-313X.2011.04863.X

21 January 2018

A naturally occurring epigenetic mutation in a gene encoding an SBP-box transcription factor inhibits tomato fruit ripening.

1 reference

https://api.crossref.org/works/10.1111%2FJ.1365-313X.2011.04863.X

21 January 2018

Biology and genetic engineering of fruit maturation for enhanced quality and shelf-life.

1 reference

https://api.crossref.org/works/10.1111%2FJ.1365-313X.2011.04863.X

21 January 2018

Engineered polyamine accumulation in tomato enhances phytonutrient content, juice quality, and vine life

1 reference

https://api.crossref.org/works/10.1111%2FJ.1365-313X.2011.04863.X

21 January 2018

Ecological and evolutionary genomics in the wild tomatoes (Solanum sect. Lycopersicon).

1 reference

https://api.crossref.org/works/10.1111%2FJ.1365-313X.2011.04863.X

21 January 2018

Phenotype of the tomato high pigment-2 mutant is caused by a mutation in the tomato homolog of DEETIOLATED1.

1 reference

https://api.crossref.org/works/10.1111%2FJ.1365-313X.2011.04863.X

21 January 2018

Genome-wide analysis of the ERF gene family in Arabidopsis and rice

1 reference

https://api.crossref.org/works/10.1111%2FJ.1365-313X.2011.04863.X

21 January 2018

Dual role for tomato heat shock protein 21: protecting photosystem II from oxidative stress and promoting color changes during fruit maturation

1 reference

https://api.crossref.org/works/10.1111%2FJ.1365-313X.2011.04863.X

21 January 2018

Cloning and characterization of the cDNA for lycopene beta-cyclase from tomato reveals decrease in its expression during fruit ripening

1 reference

https://api.crossref.org/works/10.1111%2FJ.1365-313X.2011.04863.X

21 January 2018

1-Deoxy-D-xylulose 5-phosphate reductoisomerase and plastid isoprenoid biosynthesis during tomato fruit ripening

1 reference

https://api.crossref.org/works/10.1111%2FJ.1365-313X.2011.04863.X

21 January 2018

An alternative pathway to beta -carotene formation in plant chromoplasts discovered by map-based cloning of beta and old-gold color mutations in tomato

1 reference

https://api.crossref.org/works/10.1111%2FJ.1365-313X.2011.04863.X

21 January 2018

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1 reference

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21 January 2018

Decoding genes with coexpression networks and metabolomics - 'majority report by precogs'.

1 reference

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21 January 2018

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1 reference

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21 January 2018

Comprehensive metabolic profiling and phenotyping of interspecific introgression lines for tomato improvement.

1 reference

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21 January 2018

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1 reference

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21 January 2018

Cytoscape: a software environment for integrated models of biomolecular interaction networks

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21 January 2018

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1 reference

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21 January 2018

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21 January 2018

The tomato ethylene receptors NR and LeETR4 are negative regulators of ethylene response and exhibit functional compensation within a multigene family

1 reference

https://api.crossref.org/works/10.1111%2FJ.1365-313X.2011.04863.X

21 January 2018

Members of the tomato LeEIL (EIN3-like) gene family are functionally redundant and regulate ethylene responses throughout plant development

1 reference

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21 January 2018

Identification of loci affecting flavour volatile emissions in tomato fruits.

1 reference

https://api.crossref.org/works/10.1111%2FJ.1365-313X.2011.04863.X

21 January 2018

Direct regulation of phytoene synthase gene expression and carotenoid biosynthesis by phytochrome-interacting factors.

1 reference

https://api.crossref.org/works/10.1111%2FJ.1365-313X.2011.04863.X

21 January 2018

Missing value estimation methods for DNA microarrays

1 reference

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21 January 2018

Extension of the visualization tool MapMan to allow statistical analysis of arrays, display of corresponding genes, and comparison with known responses

1 reference

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Timing and biosynthetic potential for carotenoid accumulation in genetically diverse germplasm of maize

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A MADS-box gene necessary for fruit ripening at the tomato ripening-inhibitor (rin) locus

1 reference

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21 January 2018

Fleshy fruit expansion and ripening are regulated by the Tomato SHATTERPROOF gene TAGL1

1 reference

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21 January 2018

Construct design for efficient, effective and high-throughput gene silencing in plants.

1 reference

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21 January 2018

Transcriptional regulation of the ethylene response factor LeERF2 in the expression of ethylene biosynthesis genes controls ethylene production in tomato and tobacco

1 reference

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21 January 2018

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21 January 2018

Identifiers

10.1111/J.1365-313X.2011.04863.X

1 reference

Europe PubMed Central

PubMed publication ID

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:22111515%20AND%20SRC:MED&resulttype=core&format=json

17 January 2020

PubMed publication ID

1 reference

Europe PubMed Central

PubMed publication ID

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:22111515%20AND%20SRC:MED&resulttype=core&format=json

17 January 2020

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