(Q45920633)

17 December 2017

title

RNase R mutants elucidate the catalysis of structured RNA: RNA-binding domains select the RNAs targeted for degradation. (English)

1 reference

17 December 2017

author

Cecília Maria Arraiano

series ordinal

3

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17 December 2017

Ana Barbas

object named as

Ana Barbas

series ordinal

2

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Rute Gonçalves Matos

object named as

Rute Gonçalves Matos

series ordinal

1

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language of work or name

English

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publication date

25 September 2009

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17 December 2017

number of pages

11

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based on heuristic

inferred from page(s)

published in

Biochemical Journal

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17 December 2017

volume

423

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17 December 2017

issue

2

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17 December 2017

page(s)

291-301

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17 December 2017

Comparative sequence analysis of ribonucleases HII, III, II PH and D

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1 reference

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Exoribonuclease superfamilies: structural analysis and phylogenetic distribution

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The vacB gene required for virulence in Shigella flexneri and Escherichia coli encodes the exoribonuclease RNase R.

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An important role for RNase R in mRNA decay

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The role of endoribonucleases in the regulation of RNase R.

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Cold shock induction of RNase R and its role in the maturation of the quality control mediator SsrA/tmRNA.

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RNase R affects gene expression in stationary phase: regulation of ompA.

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A single subunit, Dis3, is essentially responsible for yeast exosome core activity

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Endonucleolytic RNA cleavage by a eukaryotic exosome

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The exosome contains domains with specific endoribonuclease, exoribonuclease and cytoplasmic mRNA decay activities.

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Purification and characterization of the Escherichia coli exoribonuclease RNase R. Comparison with RNase II.

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Characterization of the functional domains of Escherichia coli RNase II.

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The role of the S1 domain in exoribonucleolytic activity: substrate specificity and multimerization

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The processive reaction mechanism of ribonuclease II.

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The poly(A)-dependent degradation pathway of rpsO mRNA is primarily mediated by RNase R.

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RNase II levels change according to the growth conditions: characterization of gmr, a new Escherichia coli gene involved in the modulation of RNase II.

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Cold shock exoribonuclease R (VacB) is involved in Aeromonas hydrophila pathogenesis

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The 3'-to-5' exoribonuclease (encoded by HP1248) of Helicobacter pylori regulates motility and apoptosis-inducing genes

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Enzymatic basis for hydrolytic versus phosphorolytic mRNA degradation in Escherichia coli and Bacillus subtilis

21 January 2018

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PNPase modulates RNase II expression in Escherichia coli: implications for mRNA decay and cell metabolism.

21 January 2018

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DNA sequencing and expression of the gene rnb encoding Escherichia coli ribonuclease II.

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Unravelling the dynamics of RNA degradation by ribonuclease II and its RNA-bound complex.

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Structural basis for processivity and single-strand specificity of RNase II.

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Determination of key residues for catalysis and RNA cleavage specificity: one mutation turns RNase II into a "SUPER-ENZYME".

21 January 2018

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A single mutation in Escherichia coli ribonuclease II inactivates the enzyme without affecting RNA binding

21 January 2018

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The exosome subunit Rrp44 plays a direct role in RNA substrate recognition

21 January 2018

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E. coli host strains significantly affect the quality of small scale plasmid DNA preparations used for sequencing

21 January 2018

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Use of bacteriophage T7 RNA polymerase to direct selective high-level expression of cloned genes

21 January 2018

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HuD RNA recognition motifs play distinct roles in the formation of a stable complex with AU-rich RNA

21 January 2018

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Gapped BLAST and PSI-BLAST: a new generation of protein database search programs

21 January 2018

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21 January 2018

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T-Coffee: A novel method for fast and accurate multiple sequence alignment

21 January 2018

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The roles of individual domains of RNase R in substrate binding and exoribonuclease activity. The nuclease domain is sufficient for digestion of structured RNA

21 January 2018

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Loss of RNase R induces competence development in Legionella pneumophila.

21 January 2018

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Substrate recognition and catalysis by the exoribonuclease RNase R.

21 January 2018

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Information available at cut rates: structure and mechanism of ribonucleases

21 January 2018

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RNA-quality control by the exosome

21 January 2018

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21 January 2018

Identifiers

DOI

10.1042/BJ20090839

1 reference

17 December 2017

PubMed ID

19630750

1 reference

17 December 2017