(Q45971855)

English

Strong correlation between statistical transmembrane tendency and experimental hydrophobicity scales for identification of transmembrane helices.

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scholarly article

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Europe PubMed Central

PubMed publication ID

18 December 2017

http://europepmc.org/abstract/MED/19521654

Strong correlation between statistical transmembrane tendency and experimental hydrophobicity scales for identification of transmembrane helices. (English)

1 reference

Europe PubMed Central

PubMed publication ID

18 December 2017

http://europepmc.org/abstract/MED/19521654

0 references

transmembrane protein

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1 reference

based on heuristic

inferred from title

author name string

Gang Zhao

1

1 reference

Europe PubMed Central

PubMed publication ID

18 December 2017

http://europepmc.org/abstract/MED/19521654

Erwin London

2

1 reference

Europe PubMed Central

PubMed publication ID

18 December 2017

http://europepmc.org/abstract/MED/19521654

publication date

12 June 2009

1 reference

Europe PubMed Central

PubMed publication ID

18 December 2017

http://europepmc.org/abstract/MED/19521654

number of pages

4

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inferred from page(s)

Journal of Membrane Biology

1 reference

Europe PubMed Central

PubMed publication ID

18 December 2017

http://europepmc.org/abstract/MED/19521654

229

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Europe PubMed Central

PubMed publication ID

18 December 2017

http://europepmc.org/abstract/MED/19521654

3

1 reference

Europe PubMed Central

PubMed publication ID

18 December 2017

http://europepmc.org/abstract/MED/19521654

165-168

1 reference

Europe PubMed Central

PubMed publication ID

18 December 2017

http://europepmc.org/abstract/MED/19521654

The behaviour of peptides on reverse-phase supports during high-pressure liquid chromatography

1 reference

https://api.crossref.org/works/10.1007%2FS00232-009-9178-0

21 January 2018

Surface tension of amino acid solutions: A hydrophobicity scale of the amino acid residues

1 reference

https://pubmed.ncbi.nlm.nih.gov/19521654

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Hydrophilicity of polar amino acid side-chains is markedly reduced by flanking peptide bonds

1 reference

https://pubmed.ncbi.nlm.nih.gov/19521654

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

New hydrophilicity scale derived from high-performance liquid chromatography peptide retention data: correlation of predicted surface residues with antigenicity and X-ray-derived accessible sites

1 reference

https://pubmed.ncbi.nlm.nih.gov/19521654

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Development of hydrophobicity parameters to analyze proteins which bear post- or cotranslational modifications

1 reference

https://pubmed.ncbi.nlm.nih.gov/19521654

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

An improved hidden Markov model for transmembrane protein detection and topology prediction and its applications to complete genomes

1 reference

https://pubmed.ncbi.nlm.nih.gov/19521654

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

A simple method for displaying the hydropathic character of a protein

1 reference

https://pubmed.ncbi.nlm.nih.gov/19521654

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

An amino acid "transmembrane tendency" scale that approaches the theoretical limit to accuracy for prediction of transmembrane helices: relationship to biological hydrophobicity

1 reference

https://pubmed.ncbi.nlm.nih.gov/19521654

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Molecular code for transmembrane-helix recognition by the Sec61 translocon

1 reference

https://pubmed.ncbi.nlm.nih.gov/19521654

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Experimentally determined hydrophobicity scale for proteins at membrane interfaces

1 reference

https://pubmed.ncbi.nlm.nih.gov/19521654

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

TM Finder: a prediction program for transmembrane protein segments using a combination of hydrophobicity and nonpolar phase helicity scales

1 reference

https://pubmed.ncbi.nlm.nih.gov/19521654

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Energetics, stability, and prediction of transmembrane helices

1 reference

https://pubmed.ncbi.nlm.nih.gov/19521654

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Extension of the fragment method to calculate amino acid zwitterion and side chain partition coefficients

1 reference

https://pubmed.ncbi.nlm.nih.gov/19521654

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Prediction of peptide retention times in high-pressure liquid chromatography on the basis of amino acid composition

1 reference

https://pubmed.ncbi.nlm.nih.gov/19521654

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Affinities of amino acid side chains for solvent water

1 reference

https://pubmed.ncbi.nlm.nih.gov/19521654

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Recognition of transmembrane helices by the endoplasmic reticulum translocon.

1 reference

https://pubmed.ncbi.nlm.nih.gov/19521654

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Analysis of transmembrane helix integration in the endoplasmic reticulum in S. cerevisiae

1 reference

https://pubmed.ncbi.nlm.nih.gov/19521654

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Hydrophobicity indices for amino acid residues as determined by high-performance liquid chromatography.

1 reference

https://pubmed.ncbi.nlm.nih.gov/19521654

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

The isolation of peptides by high-performance liquid chromatography using predicted elution positions

1 reference

https://pubmed.ncbi.nlm.nih.gov/19521654

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Interactions of hydrophobic peptides with lipid bilayers: Monte Carlo simulations with M2delta

1 reference

https://pubmed.ncbi.nlm.nih.gov/19521654

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Features of transmembrane segments that promote the lateral release from the translocase into the lipid phase

1 reference

https://pubmed.ncbi.nlm.nih.gov/19521654

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Identifiers

10.1007/S00232-009-9178-0

1 reference

Europe PubMed Central

PubMed publication ID

18 December 2017

http://europepmc.org/abstract/MED/19521654

Dimensions Publication ID

0 references

PubMed publication ID

1 reference

Europe PubMed Central

PubMed publication ID

18 December 2017

http://europepmc.org/abstract/MED/19521654

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