(Q46219899)

English

Phylogenetic analysis, homology modelling, molecular dynamics and docking studies of caffeoyl-CoA-O- methyl transferase (CCoAOMT 1 and 2) isoforms isolated from subabul (Leucaena leucocephala).

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scholarly article

1 reference

Europe PubMed Central

20 December 2017

http://europepmc.org/abstract/MED/19048314

Phylogenetic analysis, homology modelling, molecular dynamics and docking studies of caffeoyl-CoA-O- methyl transferase (CCoAOMT 1 and 2) isoforms isolated from subabul (Leucaena leucocephala). (English)

1 reference

Europe PubMed Central

20 December 2017

http://europepmc.org/abstract/MED/19048314

Leucaena leucocephala

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author name string

Nataraj Sekhar Pagadala

1

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Europe PubMed Central

20 December 2017

http://europepmc.org/abstract/MED/19048314

Manish Arha

2

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Europe PubMed Central

20 December 2017

http://europepmc.org/abstract/MED/19048314

P S Reddy

3

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Europe PubMed Central

20 December 2017

http://europepmc.org/abstract/MED/19048314

Ranadheer Kumar

4

1 reference

Europe PubMed Central

20 December 2017

http://europepmc.org/abstract/MED/19048314

V L Sirisha

5

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Europe PubMed Central

20 December 2017

http://europepmc.org/abstract/MED/19048314

S Prashant

6

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Europe PubMed Central

20 December 2017

http://europepmc.org/abstract/MED/19048314

K Janardhan Reddy

7

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Europe PubMed Central

20 December 2017

http://europepmc.org/abstract/MED/19048314

Bashir Khan

8

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Europe PubMed Central

20 December 2017

http://europepmc.org/abstract/MED/19048314

S K Rawal

9

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Europe PubMed Central

20 December 2017

http://europepmc.org/abstract/MED/19048314

P B Kavi Kishor

10

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Europe PubMed Central

20 December 2017

http://europepmc.org/abstract/MED/19048314

publication date

2 December 2008

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20 December 2017

http://europepmc.org/abstract/MED/19048314

Journal of Molecular Modeling

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Europe PubMed Central

20 December 2017

http://europepmc.org/abstract/MED/19048314

15

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20 December 2017

http://europepmc.org/abstract/MED/19048314

203-221

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20 December 2017

http://europepmc.org/abstract/MED/19048314

2

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Europe PubMed Central

20 December 2017

http://europepmc.org/abstract/MED/19048314

https://scigraph.springernature.com/pub.10.1007/s00894-008-0395-8

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Basic local alignment search tool

1 reference

https://api.crossref.org/works/10.1007%2FS00894-008-0395-8

21 January 2018

Binding site characteristics in structure-based virtual screening: evaluation of current docking tools

1 reference

https://api.crossref.org/works/10.1007%2FS00894-008-0395-8

21 January 2018

Developmental expression and substrate specificities of alfalfa caffeic acid 3-O-methyltransferase and caffeoyl coenzyme A 3-O-methyltransferase in relation to lignification.

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https://pubmed.ncbi.nlm.nih.gov/19048314

12 December 2020

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Dual methylation pathways in lignin biosynthesis

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https://pubmed.ncbi.nlm.nih.gov/19048314

12 December 2020

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Crystal structures of alfalfa caffeoyl coenzyme A 3-O-methyltransferase

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https://pubmed.ncbi.nlm.nih.gov/19048314

12 December 2020

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Derivation of rules for comparative protein modeling from a database of protein structure alignments

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https://pubmed.ncbi.nlm.nih.gov/19048314

12 December 2020

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WHAT IF: a molecular modeling and drug design program

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https://pubmed.ncbi.nlm.nih.gov/19048314

12 December 2020

based on heuristic

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Differential expression of two O-methyltransferases in lignin biosynthesis in Zinnia elegans

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https://pubmed.ncbi.nlm.nih.gov/19048314

12 December 2020

based on heuristic

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WWW-query: an on-line retrieval system for biological sequence banks

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https://pubmed.ncbi.nlm.nih.gov/19048314

12 December 2020

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Immunolocalization of two lignin O-methyltransferases in stems of alfalfa (Medicago sativa L.).

1 reference

https://pubmed.ncbi.nlm.nih.gov/19048314

12 December 2020

based on heuristic

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Secondary xylem-specific expression of caffeoyl-coenzyme A 3-O-methyltransferase plays an important role in the methylation pathway associated with lignin biosynthesis in loblolly pine.

1 reference

https://pubmed.ncbi.nlm.nih.gov/19048314

12 December 2020

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Verification of protein structures: patterns of nonbonded atomic interactions

1 reference

https://pubmed.ncbi.nlm.nih.gov/19048314

12 December 2020

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The CLUSTAL_X windows interface: flexible strategies for multiple sequence alignment aided by quality analysis tools

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https://pubmed.ncbi.nlm.nih.gov/19048314

12 December 2020

based on heuristic

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Chemical and biological evolution of nucleotide-binding protein

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https://pubmed.ncbi.nlm.nih.gov/19048314

12 December 2020

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Tobacco O-methyltransferases involved in phenylpropanoid metabolism. The different caffeoyl-coenzyme A/5-hydroxyferuloyl-coenzyme A 3/5-O-methyltransferase and caffeic acid/5-hydroxyferulic acid 3/5-O-methyltransferase classes have distinct substrat

1 reference

https://pubmed.ncbi.nlm.nih.gov/19048314

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

All-atom empirical potential for molecular modeling and dynamics studies of proteins

1 reference

https://pubmed.ncbi.nlm.nih.gov/19048314

12 December 2020

based on heuristic

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A general method applicable to the search for similarities in the amino acid sequence of two proteins

1 reference

https://pubmed.ncbi.nlm.nih.gov/19048314

12 December 2020

based on heuristic

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SWISS-MODEL and the Swiss-PdbViewer: an environment for comparative protein modeling

1 reference

https://pubmed.ncbi.nlm.nih.gov/19048314

12 December 2020

based on heuristic

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TreeView: an application to display phylogenetic trees on personal computers

1 reference

https://pubmed.ncbi.nlm.nih.gov/19048314

12 December 2020

based on heuristic

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Association of caffeoyl coenzyme A 3-O-methyltransferase expression with lignifying tissues in several dicot plants

1 reference

https://pubmed.ncbi.nlm.nih.gov/19048314

12 December 2020

based on heuristic

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Substrate profiles and expression of caffeoyl coenzyme A and caffeic acid O-methyltransferases in secondary xylem of aspen during seasonal development

1 reference

https://pubmed.ncbi.nlm.nih.gov/19048314

12 December 2020

based on heuristic

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Suppression of O-methyltransferase gene by homologous sense transgene in quaking aspen causes red-brown wood phenotypes

1 reference

https://pubmed.ncbi.nlm.nih.gov/19048314

12 December 2020

based on heuristic

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Identification of the enzymatic active site of tobacco caffeoyl-coenzyme A O-methyltransferase by site-directed mutagenesis

1 reference

https://pubmed.ncbi.nlm.nih.gov/19048314

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

cDNA cloning, substrate specificity and expression study of tobacco caffeoyl-CoA 3-O-methyltransferase, a lignin biosynthetic enzyme.

1 reference

https://pubmed.ncbi.nlm.nih.gov/19048314

12 December 2020

based on heuristic

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Errors in protein structures

1 reference

https://pubmed.ncbi.nlm.nih.gov/19048314

12 December 2020

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Lignin monomer composition is determined by the expression of a cytochrome P450-dependent monooxygenase in Arabidopsis.

1 reference

https://pubmed.ncbi.nlm.nih.gov/19048314

12 December 2020

based on heuristic

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An alternative methylation pathway in lignin biosynthesis in Zinnia.

1 reference

https://pubmed.ncbi.nlm.nih.gov/19048314

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

CASTp: computed atlas of surface topography of proteins with structural and topographical mapping of functionally annotated residues

1 reference

https://pubmed.ncbi.nlm.nih.gov/19048314

12 December 2020

based on heuristic

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Comparative protein modelling by satisfaction of spatial restraints

1 reference

https://pubmed.ncbi.nlm.nih.gov/19048314

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Identifiers

10.1007/S00894-008-0395-8

1 reference

Europe PubMed Central

20 December 2017

http://europepmc.org/abstract/MED/19048314

1 reference

Europe PubMed Central

20 December 2017

http://europepmc.org/abstract/MED/19048314

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