(Q46294741)

21 December 2017

title

Replication of nonautonomous retroelements in soybean appears to be both recent and common (English)

1 reference

21 December 2017

author

Daniel Ilut

19

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21 December 2017

Bernard E. Pfeil

24

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21 December 2017

Arnaud Couloux

Arnaud Couloux

12

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Ram Podicheti

Ram Podicheti

6

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Jeff J. Doyle

33

Jeff J Doyle

1 reference

21 December 2017

Nevin D Young

Nevin D Young

37

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author name string

Adam Wawrzynski

1

1 reference

21 December 2017

Tom Ashfield

2

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21 December 2017

Nicolas W G Chen

3

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21 December 2017

Jafar Mammadov

4

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21 December 2017

Ashley Nguyen

5

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21 December 2017

Steven B Cannon

7

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21 December 2017

Vincent Thareau

8

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21 December 2017

Carine Ameline-Torregrosa

9

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21 December 2017

Ethalinda Cannon

10

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21 December 2017

Ben Chacko

11

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21 December 2017

Anita Dalwani

13

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21 December 2017

Roxanne Denny

14

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21 December 2017

Shweta Deshpande

15

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21 December 2017

Ashley N Egan

16

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21 December 2017

Natasha Glover

17

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21 December 2017

Stacy Howell

18

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21 December 2017

Hongshing Lai

20

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21 December 2017

Sara Martin Del Campo

21

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21 December 2017

Michelle Metcalf

22

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21 December 2017

Majesta O'Bleness

23

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21 December 2017

Milind B Ratnaparkhe

25

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21 December 2017

Sylvie Samain

26

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21 December 2017

Iryna Sanders

27

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21 December 2017

Béatrice Ségurens

28

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21 December 2017

Mireille Sévignac

29

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21 December 2017

Sue Sherman-Broyles

30

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21 December 2017

Dominic M Tucker

31

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21 December 2017

Jing Yi

32

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21 December 2017

Valérie Geffroy

34

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21 December 2017

Bruce A Roe

35

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21 December 2017

M A Saghai Maroof

36

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21 December 2017

Roger W Innes

38

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21 December 2017

language of work or name

English

0 references

publication date

24 October 2008

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21 December 2017

published in

Plant Physiology

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21 December 2017

volume

148

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21 December 2017

issue

4

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21 December 2017

page(s)

1760-1771

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21 December 2017

Creative Commons Attribution 4.0 International

copyright license

start time

25 January 2021

1 reference

April 2022 Public Data File from Crossref

copyright status

copyrighted

0 references

cites work

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Analysis of retrotransposon structural diversity uncovers properties and propensities in angiosperm genome evolution

3 November 2018

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Types and rates of sequence evolution at the high-molecular-weight glutenin locus in hexaploid wheat and its ancestral genomes

3 November 2018

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3 November 2018

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3 November 2018

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Sequence conservation of homeologous bacterial artificial chromosomes and transcription of homeologous genes in soybean (Glycine max L. Merr.).

3 November 2018

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3 November 2018

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Significant expansion of Vicia pannonica genome size mediated by amplification of a single type of giant retroelement

3 November 2018

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Paleopolyploidy and gene duplication in soybean and other legumes

3 November 2018

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Cin4, an insert altering the structure of the A1 gene in Zea mays, exhibits properties of nonviral retrotransposons

3 November 2018

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Testing the polyploid past of soybean using a low-copy nuclear gene--is Glycine (Fabaceae: Papilionoideae) an auto- or allopolyploid?

3 November 2018

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3 November 2018

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The wp mutation of Glycine max carries a gene-fragment-rich transposon of the CACTA superfamily

3 November 2018

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Gene duplication and exon shuffling by helitron-like transposons generate intraspecies diversity in maize

3 November 2018

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Placing paleopolyploidy in relation to taxon divergence: a phylogenetic analysis in legumes using 39 gene families

3 November 2018

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Diaspora, a large family of Ty3-gypsy retrotransposons in Glycine max, is an envelope-less member of an endogenous plant retrovirus lineage

3 November 2018

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Sequencing the genespaces of Medicago truncatula and Lotus japonicus.

3 November 2018

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A genomic perspective on the chromodomain-containing retrotransposons: Chromoviruses

3 November 2018

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Mechanisms of recent genome size variation in flowering plants

3 November 2018

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3 November 2018

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3 November 2018

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Pack-MULE transposable elements mediate gene evolution in plants

3 November 2018

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3 November 2018

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3 November 2018

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Large retrotransposon derivatives: abundant, conserved but nonautonomous retroelements of barley and related genomes

3 November 2018

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Analyses of LTR-retrotransposon structures reveal recent and rapid genomic DNA loss in rice

3 November 2018

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Evolutionary history of Oryza sativa LTR retrotransposons: a preliminary survey of the rice genome sequences

3 November 2018

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3 November 2018

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Nonadditive changes in genome size during allopolyploidization in the wheat (aegilops-triticum) group

3 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2593652

SIRE1, an endogenous retrovirus family from Glycine max, is highly homogeneous and evolutionarily young.

3 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2593652

LTR_STRUC: a novel search and identification program for LTR retrotransposons

3 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2593652

Dasheng and RIRE2. A nonautonomous long terminal repeat element and its putative autonomous partner in the rice genome

3 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2593652

Genome size reduction through illegitimate recombination counteracts genome expansion in Arabidopsis

3 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2593652

LINEs and gypsy-like retrotransposons in Hordeum species.

3 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2593652

Structure of the HP1 chromodomain bound to histone H3 methylated at lysine 9

3 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2593652

Athila4 of Arabidopsis and Calypso of soybean define a lineage of endogenous plant retroviruses

3 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2593652

Terminal-repeat retrotransposons in miniature (TRIM) are involved in restructuring plant genomes

3 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2593652

REPuter: the manifold applications of repeat analysis on a genomic scale

3 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2593652

Ty3/Gypsy retrotransposons: description of new Arabidopsis thaliana elements and evolutionary perspectives derived from comparative genomic data

3 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2593652

Multiple sequence alignment with Clustal X

3 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2593652

The paleontology of intergene retrotransposons of maize

3 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2593652

SIRE-1, a copia/Ty1-like retroelement from soybean, encodes a retroviral envelope-like protein

3 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2593652

Gapped BLAST and PSI-BLAST: a new generation of protein database search programs

3 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2593652

Multiple non-LTR retrotransposons in the genome of Arabidopsis thaliana

3 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2593652

Integration and nonrandom mutation of a plasma membrane proton ATPase gene fragment within the Bs1 retroelement of maize

3 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2593652

Sequence variability within the tobacco retrotransposon Tnt1 population.

3 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2593652

Analysis and chromosomal localization of retrotransposons in sugar beet (Beta vulgaris L.): LINEs and Ty1-copia-like elements as major components of the genome.

3 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2593652

A simple method for estimating evolutionary rates of base substitutions through comparative studies of nucleotide sequences

3 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2593652

Isolation of the transposable maize controlling elements Ac and Ds

3 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2593652

The quasispecies (extremely heterogeneous) nature of viral RNA genome populations: biological relevance--a review

3 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2593652

Origin and evolution of retroelements based upon their reverse transcriptase sequences

3 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2593652

Transposing without ends: the non-LTR retrotransposable elements

3 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2593652

DNA sequence organization in the soybean plant

3 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2593652

Morgane, a new LTR retrotransposon group, and its subfamilies in wheats

3 November 2018

1 reference

12 December 2020

Polyploidy: recurrent formation and genome evolution

1 reference

12 December 2020

Sequence organization of the soybean genome

1 reference

12 December 2020

The mobility of the tobacco Tnt1 retrotransposon correlates with its transcriptional activation by fungal factors

1 reference

12 December 2020

Identifiers

DOI

10.1104/PP.108.127910

1 reference

21 December 2017

PMC publication ID

2593652

0 references

1 reference

21 December 2017