(Q46313078)

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Bridging the genotyping gap: using genotyping by sequencing (GBS) to add high-density SNP markers and new value to traditional bi-parental mapping and breeding populations

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scholarly article

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Europe PubMed Central

PubMed publication ID

21 December 2017

http://europepmc.org/abstract/MED/23918062

Bridging the genotyping gap: using genotyping by sequencing (GBS) to add high-density SNP markers and new value to traditional bi-parental mapping and breeding populations (English)

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Europe PubMed Central

PubMed publication ID

21 December 2017

http://europepmc.org/abstract/MED/23918062

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based on heuristic

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2

1 reference

Europe PubMed Central

PubMed publication ID

21 December 2017

http://europepmc.org/abstract/MED/23918062

object named as

Joseph Gage

5

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Nourollah Ahmadi

object named as

Nourollah Ahmadi

8

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author name string

Jennifer Spindel

1

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Europe PubMed Central

PubMed publication ID

21 December 2017

http://europepmc.org/abstract/MED/23918062

Charles Chen

3

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Europe PubMed Central

PubMed publication ID

21 December 2017

http://europepmc.org/abstract/MED/23918062

Joshua Cobb

4

1 reference

Europe PubMed Central

PubMed publication ID

21 December 2017

http://europepmc.org/abstract/MED/23918062

Sandra Harrington

6

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Europe PubMed Central

PubMed publication ID

21 December 2017

http://europepmc.org/abstract/MED/23918062

Mathias Lorieux

7

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Europe PubMed Central

PubMed publication ID

21 December 2017

http://europepmc.org/abstract/MED/23918062

Susan McCouch

9

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Europe PubMed Central

PubMed publication ID

21 December 2017

http://europepmc.org/abstract/MED/23918062

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publication date

6 August 2013

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Europe PubMed Central

PubMed publication ID

21 December 2017

http://europepmc.org/abstract/MED/23918062

Theoretical and Applied Genetics

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Europe PubMed Central

PubMed publication ID

21 December 2017

http://europepmc.org/abstract/MED/23918062

126

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Europe PubMed Central

PubMed publication ID

21 December 2017

http://europepmc.org/abstract/MED/23918062

11

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Europe PubMed Central

PubMed publication ID

21 December 2017

http://europepmc.org/abstract/MED/23918062

2699-2716

1 reference

Europe PubMed Central

PubMed publication ID

21 December 2017

http://europepmc.org/abstract/MED/23918062

https://scigraph.springernature.com/pub.10.1007/s00122-013-2166-x

0 references

QTL mapping in three tropical maize populations reveals a set of constitutive and adaptive genomic regions for drought tolerance

1 reference

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Rapid SNP discovery and genetic mapping using sequenced RAD markers

1 reference

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TASSEL: software for association mapping of complex traits in diverse samples

1 reference

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An integrated physical and genetic map of the rice genome

1 reference

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Three-dimensional root phenotyping with a novel imaging and software platform

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Genome-wide genetic marker discovery and genotyping using next-generation sequencing

1 reference

https://api.crossref.org/works/10.1007%2FS00122-013-2166-X

21 January 2018

A robust, simple genotyping-by-sequencing (GBS) approach for high diversity species

1 reference

https://api.crossref.org/works/10.1007%2FS00122-013-2166-X

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Genetic architecture of aluminum tolerance in rice (Oryza sativa) determined through genome-wide association analysis and QTL mapping

1 reference

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An SNP resource for rice genetics and breeding based on subspecies indica and japonica genome alignments

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A genetic model for the female sterility barrier between Asian and African cultivated rice species

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High-throughput genotyping by whole-genome resequencing.

1 reference

https://api.crossref.org/works/10.1007%2FS00122-013-2166-X

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A map of rice genome variation reveals the origin of cultivated rice

1 reference

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Fast gapped-read alignment with Bowtie 2

1 reference

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21 January 2018

Fast and accurate long-read alignment with Burrows-Wheeler transform

1 reference

https://api.crossref.org/works/10.1007%2FS00122-013-2166-X

21 January 2018

QTL x environment interactions in rice. I. heading date and plant height

1 reference

https://api.crossref.org/works/10.1007%2FS00122-013-2166-X

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Systematic detection of errors in genetic linkage data

1 reference

https://api.crossref.org/works/10.1007%2FS00122-013-2166-X

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Microsatellite marker development, mapping and applications in rice genetics and breeding

1 reference

https://api.crossref.org/works/10.1007%2FS00122-013-2166-X

21 January 2018

Family-based mapping of quantitative trait loci in plant breeding populations with resistance to Fusarium head blight in wheat as an illustration

1 reference

https://api.crossref.org/works/10.1007%2FS00122-013-2166-X

21 January 2018

High-throughput single nucleotide polymorphism genotyping for breeding applications in rice using the BeadXpress platform

1 reference

https://api.crossref.org/works/10.1007%2FS00122-013-2166-X

21 January 2018

AFLP: a new technique for DNA fingerprinting

1 reference

https://api.crossref.org/works/10.1007%2FS00122-013-2166-X

21 January 2018

Diversity Arrays Technology (DArT) for whole-genome profiling of barley

1 reference

https://api.crossref.org/works/10.1007%2FS00122-013-2166-X

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Resequencing 50 accessions of cultivated and wild rice yields markers for identifying agronomically important genes

1 reference

https://api.crossref.org/works/10.1007%2FS00122-013-2166-X

21 January 2018

A fine physical map of the rice chromosome 4.

1 reference

https://api.crossref.org/works/10.1007%2FS00122-013-2166-X

21 January 2018

SNP deserts of Asian cultivated rice: genomic regions under domestication

1 reference

https://pubmed.ncbi.nlm.nih.gov/23918062

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Statistical methods for mapping quantitative trait loci from a dense set of markers.

1 reference

https://pubmed.ncbi.nlm.nih.gov/23918062

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Relationship between transmission ratio distortion and genetic divergence in intraspecific rice crosses

1 reference

https://pubmed.ncbi.nlm.nih.gov/23918062

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Physical maps and recombination frequency of six rice chromosomes

1 reference

https://pubmed.ncbi.nlm.nih.gov/23918062

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Identification of five new blast resistance genes in the highly blast-resistant rice variety IR64 using a QTL mapping strategy

1 reference

https://pubmed.ncbi.nlm.nih.gov/23918062

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

A genome-wide survey of reproductive barriers in an intraspecific hybrid.

1 reference

https://pubmed.ncbi.nlm.nih.gov/23918062

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Comparative analyses of linkage maps and segregation distortion of two F₂ populations derived from japonica crossed with indica rice

1 reference

https://pubmed.ncbi.nlm.nih.gov/23918062

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Gene actions of QTLs affecting several agronomic traits resolved in a recombinant inbred rice population and two backcross populations

1 reference

https://pubmed.ncbi.nlm.nih.gov/23918062

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

A high-density rice genetic linkage map with 2275 markers using a single F2 population.

1 reference

https://pubmed.ncbi.nlm.nih.gov/23918062

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Gene actions of QTLs affecting several agronomic traits resolved in a recombinant inbred rice population and two testcross populations

1 reference

https://pubmed.ncbi.nlm.nih.gov/23918062

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Detecting marker-QTL linkage and estimating QTL gene effect and map location using a saturated genetic map.

1 reference

https://pubmed.ncbi.nlm.nih.gov/23918062

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Diverse variation of reproductive barriers in three intraspecific rice crosses

1 reference

https://pubmed.ncbi.nlm.nih.gov/23918062

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Chromosomal regions associated with segregation distortion of molecular markers in F2, backcross, doubled haploid, and recombinant inbred populations in rice (Oryza sativa L.).

1 reference

https://pubmed.ncbi.nlm.nih.gov/23918062

12 December 2020

based on heuristic

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[Mapping quantitative trait loci associated with rice grain shape based on an indica/japonica backcross population]

1 reference

https://pubmed.ncbi.nlm.nih.gov/23918062

12 December 2020

based on heuristic

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Polymorphism, distribution, and segregation of AFLP markers in a doubled haploid rice population

1 reference

https://pubmed.ncbi.nlm.nih.gov/23918062

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Search for and analysis of single nucleotide polymorphisms (SNPs) in rice (Oryza sativa, Oryza rufipogon) and establishment of SNP markers

1 reference

https://pubmed.ncbi.nlm.nih.gov/23918062

12 December 2020

based on heuristic

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Constructing confidence intervals for QTL location

1 reference

https://pubmed.ncbi.nlm.nih.gov/23918062

12 December 2020

based on heuristic

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A comparative transcriptomic study of an allotetraploid and its diploid progenitors illustrates the unique advantages and challenges of RNA-seq in plant species

1 reference

https://pubmed.ncbi.nlm.nih.gov/23918062

12 December 2020

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Identification of QTL for growth- and grain yield-related traits in rice across nine locations of Asia

1 reference

https://pubmed.ncbi.nlm.nih.gov/23918062

12 December 2020

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Identifiers

10.1007/S00122-013-2166-X

1 reference

Europe PubMed Central

PubMed publication ID

21 December 2017

http://europepmc.org/abstract/MED/23918062

PubMed publication ID

1 reference

Europe PubMed Central

PubMed publication ID

21 December 2017

http://europepmc.org/abstract/MED/23918062

ResearchGate publication ID

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