(Q46523525)

30 June 2018

title

Profiling the transcriptome with RNA SPOTs (English)

1 reference

30 June 2018

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Long Cai

4

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author name string

Chee-Huat Linus Eng

series ordinal

1

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30 June 2018

Sheel Shah

series ordinal

2

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30 June 2018

Julian Thomassie

series ordinal

3

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30 June 2018

publication date

13 November 2017

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30 June 2018

published in

Nature Methods

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30 June 2018

volume

14

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30 June 2018

issue

12

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30 June 2018

page(s)

1153-1155

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30 June 2018

describes a project that uses

ImageJ

1 reference

11 June 2022

https://www.ebi.ac.uk/europepmc/webservices/rest/PMC5819366/fullTextXML

based on heuristic

inferred from PubMed Central ID database lookup

exact match

https://scigraph.springernature.com/pub.10.1038/nmeth.4500

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cites work

Combinatorial Signal Perception in the BMP Pathway

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5819366

Comprehensive single-cell transcriptional profiling of a multicellular organism.

3 July 2018

1 reference

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In Situ Transcription Profiling of Single Cells Reveals Spatial Organization of Cells in the Mouse Hippocampus

3 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5819366

High-throughput single-cell gene-expression profiling with multiplexed error-robust fluorescence in situ hybridization

3 July 2018

1 reference

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Scalable microfluidics for single-cell RNA printing and sequencing

3 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5819366

Optical imaging. Expansion microscopy

3 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5819366

Dynamic heterogeneity and DNA methylation in embryonic stem cells

3 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5819366

Next-generation in situ hybridization chain reaction: higher gain, lower cost, greater durability

3 July 2018

1 reference

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Single-cell in situ RNA profiling by sequential hybridization

3 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5819366

The Xist lncRNA exploits three-dimensional genome architecture to spread across the X chromosome

3 July 2018

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Versatile design and synthesis platform for visualizing genomes with Oligopaint FISH probes

3 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5819366

Imputing gene expression from selectively reduced probe sets

3 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5819366

Single-cell systems biology by super-resolution imaging and combinatorial labeling

3 July 2018

1 reference

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TFCat: the curated catalog of mouse and human transcription factors

3 July 2018

1 reference

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Mapping and quantifying mammalian transcriptomes by RNA-Seq

3 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5819366

The transcriptional landscape of the yeast genome defined by RNA sequencing

3 July 2018

1 reference

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Direct multiplexed measurement of gene expression with color-coded probe pairs

3 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5819366

Stochastic mRNA synthesis in mammalian cells

3 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5819366

Visualization of single RNA transcripts in situ

3 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5819366

FastTag Nucleic Acid Labeling System: a versatile method for incorporating haptens, fluorochromes and affinity ligands into DNA, RNA and oligonucleotides.

3 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5819366

Multiplexed Dynamic Imaging of Genomic Loci by Combined CRISPR Imaging and DNA Sequential FISH.

3 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5819366

Synthetic recording and in situ readout of lineage information in single cells.

15 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5819366

15 August 2018

Identifiers

DOI

10.1038/NMETH.4500

1 reference

30 June 2018

PMC publication ID

5819366

1 reference

30 June 2018

PubMed publication ID

29131163

1 reference

30 June 2018