(Q46632156)

English

Alternative splicing of type II procollagen exon 2 is regulated by the combination of a weak 5' splice site and an adjacent intronic stem-loop cis element

scientific article published on 2 August 2005

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scholarly article

1 reference

Europe PubMed Central

PubMed publication ID

23 December 2017

http://europepmc.org/abstract/MED/16076844

Alternative splicing of type II procollagen exon 2 is regulated by the combination of a weak 5' splice site and an adjacent intronic stem-loop cis element (English)

1 reference

Europe PubMed Central

PubMed publication ID

23 December 2017

http://europepmc.org/abstract/MED/16076844

alternative mRNA splicing, via spliceosome

1 reference

based on heuristic

inferred from title

Linda J Sandell

5

object named as

Linda J Sandell

1 reference

Europe PubMed Central

PubMed publication ID

23 December 2017

http://europepmc.org/abstract/MED/16076844

author name string

Audrey McAlinden

1

1 reference

Europe PubMed Central

PubMed publication ID

23 December 2017

http://europepmc.org/abstract/MED/16076844

Necat Havlioglu

2

1 reference

Europe PubMed Central

PubMed publication ID

23 December 2017

http://europepmc.org/abstract/MED/16076844

Li Liang

3

1 reference

Europe PubMed Central

PubMed publication ID

23 December 2017

http://europepmc.org/abstract/MED/16076844

Sherri R Davies

4

1 reference

Europe PubMed Central

PubMed publication ID

23 December 2017

http://europepmc.org/abstract/MED/16076844

language of work or name

0 references

publication date

2 August 2005

1 reference

Europe PubMed Central

PubMed publication ID

23 December 2017

http://europepmc.org/abstract/MED/16076844

Journal of Biological Chemistry

1 reference

Europe PubMed Central

PubMed publication ID

23 December 2017

http://europepmc.org/abstract/MED/16076844

280

1 reference

Europe PubMed Central

PubMed publication ID

23 December 2017

http://europepmc.org/abstract/MED/16076844

38

1 reference

Europe PubMed Central

PubMed publication ID

23 December 2017

http://europepmc.org/abstract/MED/16076844

32700-32711

1 reference

Europe PubMed Central

PubMed publication ID

23 December 2017

http://europepmc.org/abstract/MED/16076844

Mechanisms of alternative pre-messenger RNA splicing

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M505940200

21 January 2018

The expression of two isoforms of the human fibroblast growth factor receptor (flg) is directed by alternative splicing

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21 January 2018

Regulation of alternative pre-mRNA splicing during erythroid differentiation.

1 reference

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21 January 2018

Tissue-specific splicing of two mutually exclusive exons of the chicken beta-tropomyosin pre-mRNA: positive and negative regulations

1 reference

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21 January 2018

Mechanical devices of the spliceosome: motors, clocks, springs, and things

1 reference

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21 January 2018

Co-transcriptional splicing of pre-messenger RNAs: considerations for the mechanism of alternative splicing

1 reference

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21 January 2018

Common themes in the function of transcription and splicing enhancers

1 reference

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21 January 2018

Multiple distinct splicing enhancers in the protein-coding sequences of a constitutively spliced pre-mRNA.

1 reference

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21 January 2018

Exonic splicing enhancers: mechanism of action, diversity and role in human genetic diseases

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21 January 2018

Predictive identification of exonic splicing enhancers in human genes

1 reference

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21 January 2018

Alternative pre-mRNA splicing: the logic of combinatorial control

1 reference

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21 January 2018

The SR protein family: pleiotropic functions in pre-mRNA splicing

1 reference

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21 January 2018

Sorting out the complexity of SR protein functions

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21 January 2018

The RNA-binding protein TIA-1 is a novel mammalian splicing regulator acting through intron sequences adjacent to a 5' splice site

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21 January 2018

An intronic splicing silencer causes skipping of the IIIb exon of fibroblast growth factor receptor 2 through involvement of polypyrimidine tract binding protein

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21 January 2018

The hnRNP A1 protein regulates HIV-1 tat splicing via a novel intron silencer element.

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21 January 2018

RNA secondary structure: an important cis-element in rat calcitonin/CGRP pre-messenger RNA splicing

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21 January 2018

Regulation of fibronectin EDA exon alternative splicing: possible role of RNA secondary structure for enhancer display.

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21 January 2018

Regulation of protein diversity by alternative pre-mRNA splicing with specific focus on chondrogenesis.

1 reference

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21 January 2018

Cis-acting elements regulate alternative splicing of exons 6A, 6B and 8 of the alpha1(XI) collagen gene and contribute to the regional diversification of collagen XI matrices.

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M505940200

21 January 2018

Conservation of the sizes of 53 introns and over 100 intronic sequences for the binding of common transcription factors in the human and mouse genes for type II procollagen (COL2A1).

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M505940200

21 January 2018

Tissue-specific and differential expression of alternatively spliced alpha 1(II) collagen mRNAs in early human embryos.

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M505940200

21 January 2018

Preferential expression of alternatively spliced mRNAs encoding type II procollagen with a cysteine-rich amino-propeptide in differentiating cartilage and nonchondrogenic tissues during early mouse development.

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M505940200

21 January 2018

Type IIA procollagen amino propeptide is localized in human embryonic tissues

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M505940200

21 January 2018

Type IIA procollagen containing the cysteine-rich amino propeptide is deposited in the extracellular matrix of prechondrogenic tissue and binds to TGF-beta1 and BMP-2.

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M505940200

21 January 2018

Ultrastructural characterization of developmental and degenerative vitreo-retinal changes in the eyes of transgenic mice with a deletion mutation in type II collagen gene.

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M505940200

21 January 2018

Development of a cellular model to study alternative splicing of type II collagen gene

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M505940200

21 January 2018

Cis-acting intronic elements that regulate cartilage-specific alternative splicing of the type II collagen (Col2) pre-mRNA lie at or near splice site junction sequences flanking exon 2 of the gene

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M505940200

21 January 2018

Incomplete processing of type II procollagen by a rat chondrosarcoma cell line

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M505940200

21 January 2018

Human-mouse alignments with BLASTZ

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M505940200

21 January 2018

Combining phylogenetic and hidden Markov models in biosequence analysis

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M505940200

21 January 2018

Aligning multiple genomic sequences with the threaded blockset aligner

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M505940200

21 January 2018

Mfold web server for nucleic acid folding and hybridization prediction

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M505940200

21 January 2018

Expanded sequence dependence of thermodynamic parameters improves prediction of RNA secondary structure

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M505940200

21 January 2018

Chondrogenic differentiation of murine C3H10T1/2 multipotential mesenchymal cells: I. Stimulation by bone morphogenetic protein-2 in high-density micromass cultures.

1 reference

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21 January 2018

Role of myosin phosphatase isoforms in cGMP-mediated smooth muscle relaxation

1 reference

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21 January 2018

Intronic sequence with both negative and positive effects on the regulation of alternative transcripts of the chicken beta tropomyosin transcripts.

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M505940200

21 January 2018

Identification of eight proteins that cross-link to pre-mRNA in the yeast commitment complex

1 reference

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21 January 2018

Interaction of the U1 snRNP with nonconserved intronic sequences affects 5' splice site selection.

1 reference

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21 January 2018

Splicing of a myosin phosphatase targeting subunit 1 alternative exon is regulated by intronic cis-elements and a novel bipartite exonic enhancer/silencer element

1 reference

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21 January 2018

TIA proteins are necessary but not sufficient for the tissue-specific splicing of the myosin phosphatase targeting subunit 1

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M505940200

21 January 2018

The splicing regulator TIA-1 interacts with U1-C to promote U1 snRNP recruitment to 5' splice sites

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M505940200

21 January 2018

A novel bipartite splicing enhancer modulates the differential processing of the human fibronectin EDA exon

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M505940200

21 January 2018

Alternative splicing caused by RNA secondary structure.

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M505940200

21 January 2018

Pre-mRNA secondary structure and the regulation of splicing

1 reference

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21 January 2018

RNA secondary structure repression of a muscle-specific exon in HeLa cell nuclear extracts.

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M505940200

21 January 2018

Exon as well as intron sequences are cis-regulating elements for the mutually exclusive alternative splicing of the beta tropomyosin gene

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M505940200

21 January 2018

5' splice site mutations in tau associated with the inherited dementia FTDP-17 affect a stem-loop structure that regulates alternative splicing of exon 10.

1 reference

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21 January 2018

Helicase mechanisms and the coupling of helicases within macromolecular machines. Part II: Integration of helicases into cellular processes

1 reference

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21 January 2018

The 100-kda U5 snRNP protein (hPrp28p) contacts the 5' splice site through its ATPase site

1 reference

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21 January 2018

p68 RNA helicase is an essential human splicing factor that acts at the U1 snRNA-5' splice site duplex

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M505940200

21 January 2018

The SR splicing factors ASF/SF2 and SC35 have antagonistic effects on intronic enhancer-dependent splicing of the beta-tropomyosin alternative exon 6A

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M505940200

21 January 2018

hnRNP A1 and the SR proteins ASF/SF2 and SC35 have antagonistic functions in splicing of beta-tropomyosin exon 6B.

1 reference

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21 January 2018

Roles of hnRNP A1, SR proteins, and p68 helicase in c-H-ras alternative splicing regulation

1 reference

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21 January 2018

SC35 and heterogeneous nuclear ribonucleoprotein A/B proteins bind to a juxtaposed exonic splicing enhancer/exonic splicing silencer element to regulate HIV-1 tat exon 2 splicing

1 reference

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21 January 2018

Multiple links between transcription and splicing

1 reference

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21 January 2018

A direct role of SRY and SOX proteins in pre-mRNA splicing

1 reference

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21 January 2018

Identifiers

10.1074/JBC.M505940200

1 reference

Europe PubMed Central

PubMed publication ID

23 December 2017

http://europepmc.org/abstract/MED/16076844

PubMed publication ID

1 reference

Europe PubMed Central

PubMed publication ID

23 December 2017

http://europepmc.org/abstract/MED/16076844

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