(Q46876645)

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Stable isotope labeling by amino acids in cell culture (SILAC) and proteome quantitation of mouse embryonic stem cells to a depth of 5,111 proteins

scientific article published on 28 November 2007

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scholarly article

1 reference

Europe PubMed Central

26 December 2017

http://europepmc.org/abstract/MED/18045802

Stable isotope labeling by amino acids in cell culture (SILAC) and proteome quantitation of mouse embryonic stem cells to a depth of 5,111 proteins (English)

1 reference

Europe PubMed Central

26 December 2017

http://europepmc.org/abstract/MED/18045802

isotopic labeling

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based on heuristic

inferred from title

8

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Europe PubMed Central

26 December 2017

http://europepmc.org/abstract/MED/18045802

Johannes Graumann

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Johannes Graumann

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7

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Jürgen Cox

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Europe PubMed Central

26 December 2017

http://europepmc.org/abstract/MED/18045802

9

object named as

Matthias Mann

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Europe PubMed Central

26 December 2017

http://europepmc.org/abstract/MED/18045802

author name string

Nina C Hubner

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1 reference

Europe PubMed Central

26 December 2017

http://europepmc.org/abstract/MED/18045802

Jeong Beom Kim

3

1 reference

Europe PubMed Central

26 December 2017

http://europepmc.org/abstract/MED/18045802

Kinarm Ko

4

1 reference

Europe PubMed Central

26 December 2017

http://europepmc.org/abstract/MED/18045802

Markus Moser

5

1 reference

Europe PubMed Central

26 December 2017

http://europepmc.org/abstract/MED/18045802

Chanchal Kumar

6

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Europe PubMed Central

26 December 2017

http://europepmc.org/abstract/MED/18045802

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publication date

28 November 2007

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Europe PubMed Central

26 December 2017

http://europepmc.org/abstract/MED/18045802

Molecular & Cellular Proteomics

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26 December 2017

http://europepmc.org/abstract/MED/18045802

7

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http://europepmc.org/abstract/MED/18045802

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Europe PubMed Central

26 December 2017

http://europepmc.org/abstract/MED/18045802

672-683

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Europe PubMed Central

26 December 2017

http://europepmc.org/abstract/MED/18045802

Embryonic stem cells: prospects for developmental biology and cell therapy

1 reference

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21 January 2018

The maturing of the human embryonic stem cell transcriptome profile.

1 reference

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21 January 2018

More than 40,000 transcripts, including novel and noncoding transcripts, in mouse embryonic stem cells

1 reference

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21 January 2018

Genome-wide maps of chromatin state in pluripotent and lineage-committed cells

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21 January 2018

Mass spectrometry-based proteomics

1 reference

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21 January 2018

Is proteomics the new genomics?

1 reference

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21 January 2018

Concise review: trends in stem cell proteomics

1 reference

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21 January 2018

Large-scale identification of proteins expressed in mouse embryonic stem cells.

1 reference

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21 January 2018

A quest for human and mouse embryonic stem cell-specific proteins.

1 reference

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21 January 2018

Mass spectrometry-based proteomics turns quantitative

1 reference

https://api.crossref.org/works/10.1074%2FMCP.M700460-MCP200

21 January 2018

Stable isotope labeling by amino acids in cell culture, SILAC, as a simple and accurate approach to expression proteomics

1 reference

https://api.crossref.org/works/10.1074%2FMCP.M700460-MCP200

21 January 2018

Functional and quantitative proteomics using SILAC

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A subset of ES-cell-derived neural cells marked by gene targeting

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A method for the quantitative recovery of protein in dilute solution in the presence of detergents and lipids

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Stop and go extraction tips for matrix-assisted laser desorption/ionization, nanoelectrospray, and LC/MS sample pretreatment in proteomics

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Accurate transcription initiation by RNA polymerase II in a soluble extract from isolated mammalian nuclei

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In-gel digestion for mass spectrometric characterization of proteins and proteomes

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Trypsin cleaves exclusively C-terminal to arginine and lysine residues

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21 January 2018

Parts per million mass accuracy on an Orbitrap mass spectrometer via lock mass injection into a C-trap

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21 January 2018

Analysis of protein complexes using mass spectrometry

1 reference

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21 January 2018

The International Protein Index: an integrated database for proteomics experiments

1 reference

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21 January 2018

Qscore: an algorithm for evaluating SEQUEST database search results

1 reference

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21 January 2018

Evaluation of multidimensional chromatography coupled with tandem mass spectrometry (LC/LC-MS/MS) for large-scale protein analysis: the yeast proteome

1 reference

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21 January 2018

Probability-based protein identification by searching sequence databases using mass spectrometry data

1 reference

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21 January 2018

On the proper use of mass accuracy in proteomics.

1 reference

https://api.crossref.org/works/10.1074%2FMCP.M700460-MCP200

21 January 2018

Genesis: cluster analysis of microarray data

1 reference

https://api.crossref.org/works/10.1074%2FMCP.M700460-MCP200

21 January 2018

BiNGO: a Cytoscape plugin to assess overrepresentation of gene ontology categories in biological networks

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21 January 2018

Cytoscape: a software environment for integrated models of biomolecular interaction networks

1 reference

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21 January 2018

The human urinary proteome contains more than 1500 proteins, including a large proportion of membrane proteins

1 reference

https://api.crossref.org/works/10.1074%2FMCP.M700460-MCP200

21 January 2018

Gene function in early mouse embryonic stem cell differentiation

1 reference

https://api.crossref.org/works/10.1074%2FMCP.M700460-MCP200

21 January 2018

BMP induction of Id proteins suppresses differentiation and sustains embryonic stem cell self-renewal in collaboration with STAT3

1 reference

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21 January 2018

Added value for tandem mass spectrometry shotgun proteomics data validation through isoelectric focusing of peptides

1 reference

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21 January 2018

Efficient fractionation and improved protein identification by peptide OFFGEL electrophoresis.

1 reference

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21 January 2018

Developmental-specific activity of the FGF-4 enhancer requires the synergistic action of Sox2 and Oct-3

1 reference

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21 January 2018

Functional expression cloning of Nanog, a pluripotency sustaining factor in embryonic stem cells

1 reference

https://api.crossref.org/works/10.1074%2FMCP.M700460-MCP200

21 January 2018

The homeoprotein Nanog is required for maintenance of pluripotency in mouse epiblast and ES cells

1 reference

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21 January 2018

Sall4 modulates embryonic stem cell pluripotency and early embryonic development by the transcriptional regulation of Pou5f1

1 reference

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21 January 2018

Dppa2 and Dppa4 are closely linked SAP motif genes restricted to pluripotent cells and the germ line.

1 reference

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21 January 2018

A stem cell molecular signature

1 reference

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21 January 2018

"Stemness": transcriptional profiling of embryonic and adult stem cells

1 reference

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21 January 2018

New cell lines from mouse epiblast share defining features with human embryonic stem cells

1 reference

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21 January 2018

Absolute protein expression profiling estimates the relative contributions of transcriptional and translational regulation.

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21 January 2018

Epigenetic signatures of stem-cell identity.

1 reference

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21 January 2018

Translating the Histone Code

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Chromatin modifications and their function

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21 January 2018

Anisotropic mechanosensing by mesenchymal stem cells

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21 January 2018

Proteomic characterization of the human centrosome by protein correlation profiling

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A mammalian organelle map by protein correlation profiling

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Direct reprogramming of genetically unmodified fibroblasts into pluripotent stem cells

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21 January 2018

Generation of germline-competent induced pluripotent stem cells

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In vitro reprogramming of fibroblasts into a pluripotent ES-cell-like state

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Mechanism of divergent growth factor effects in mesenchymal stem cell differentiation

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The ABC's (and XYZ's) of peptide sequencing

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21 January 2018

An alpha-E-catenin gene trap mutation defines its function in preimplantation development

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Role of ERas in promoting tumour-like properties in mouse embryonic stem cells

1 reference

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21 January 2018

Analysis of Esg1 expression in pluripotent cells and the germline reveals similarities with Oct4 and Sox2 and differences between human pluripotent cell lines

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21 January 2018

Dissecting self-renewal in stem cells with RNA interference

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21 January 2018

A protein interaction network for pluripotency of embryonic stem cells

1 reference

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21 January 2018

Stella is a maternal effect gene required for normal early development in mice

1 reference

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21 January 2018

UTF1 is a chromatin-associated protein involved in ES cell differentiation

1 reference

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21 January 2018

Zic3 is required for maintenance of pluripotency in embryonic stem cells.

1 reference

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21 January 2018

An experimental correction for arginine-to-proline conversion artifacts in SILAC-based quantitative proteomics

1 reference

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21 January 2018

Identifiers

10.1074/MCP.M700460-MCP200

1 reference

Europe PubMed Central

26 December 2017

http://europepmc.org/abstract/MED/18045802

1 reference

Europe PubMed Central

26 December 2017

http://europepmc.org/abstract/MED/18045802

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