(Q47619200)

4 February 2018

title

Computational modeling predicts the structure and dynamics of chromatin fiber (English)

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4 February 2018

author

Tamar Schlick

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ORCID Public Data File 2021

author name string

Beard DA

series ordinal

1

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4 February 2018

Schlick T

series ordinal

2

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4 February 2018

publication date

1 February 2001

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4 February 2018

published in

Structure

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4 February 2018

volume

9

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4 February 2018

issue

2

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4 February 2018

page(s)

105-114

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4 February 2018

What determines the folding of the chromatin fiber?

cites work

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A chromatin folding model that incorporates linker variability generates fibers resembling the native structures

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Solenoidal model for superstructure in chromatin

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Crystal structure of the nucleosome core particle at 2.8 A resolution

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Modeling protein-induced configurational changes in DNA minicircles

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Knotting of a DNA chain during ring closure

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Probability of DNA knotting and the effective diameter of the DNA double helix

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7 January 2021

The influence of salt on the structure and energetics of supercoiled DNA

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7 January 2021

The twist, writhe and overall shape of supercoiled DNA change during counterion-induced transition from a loosely to a tightly interwound superhelix. Possible implications for DNA structure in vivo

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7 January 2021

Visualization of supercoiled DNA with atomic force microscopy in situ

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7 January 2021

Direct detection of linker DNA bending in defined-length oligomers of chromatin

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7 January 2021

Linker DNA bending induced by the core histones of chromatin.

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7 January 2021

Chromatin conformation and salt-induced compaction: three-dimensional structural information from cryoelectron microscopy

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7 January 2021

Changes in chromatin folding in solution.

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7 January 2021

Higher order structure of chromatin: orientation of nucleosomes within the 30 nm chromatin solenoid is independent of species and spacer length

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Synchrotron X-ray scattering study of chromatin condensation induced by monovalent salt: analysis of the small-angle scattering data

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Interpretation of the X-ray scattering profiles of chromatin at various NaCl concentrations by a simple chain model

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7 January 2021

Transition of chromatin from the "10 nm" lower order structure, to the "30 nm" higher order structure as followed by small angle X-ray scattering

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7 January 2021

Nucleosomes, linker DNA, and linker histone form a unique structural motif that directs the higher-order folding and compaction of chromatin

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7 January 2021

How chromatin changes its shape

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7 January 2021

The superstructure of chromatin and its condensation mechanism. II. Theoretical analysis of the X-ray scattering patterns and model calculations

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7 January 2021

Chromatin fibers are left-handed double helices with diameter and mass per unit length that depend on linker length.

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7 January 2021

Transcriptional silencing in yeast is associated with reduced nucleosome acetylation

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7 January 2021

A direct link between core histone acetylation and transcriptionally active chromatin

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7 January 2021

Histone acetylation and globin gene switching

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7 January 2021

Core histone hyperacetylation co-maps with generalized DNase I sensitivity in the chicken beta-globin chromosomal domain.

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7 January 2021

Histone H4 isoforms acetylated at specific lysine residues define individual chromosomes and chromatin domains in Drosophila polytene nuclei

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Acetylated histone H4 on the male X chromosome is associated with dosage compensation in Drosophila

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7 January 2021

Modeling superhelical DNA: recent analytical and dynamic approaches.

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Interactions of highly charged colloidal cylinders with applications to double-stranded

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7 January 2021

Effect of bending strain on the torsion elastic constant of DNA.

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7 January 2021

Ionic effects on the elasticity of single DNA molecules

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Identifiers

DOI

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4 February 2018

PubMed ID

11250195

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4 February 2018