(Q47763369)

5 February 2018

title

Tedna: a transposable element de novo assembler (English)

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2

Eduard Akhunov

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3

Hadi Quesneville

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5 February 2018

author name string

Matthias Zytnicki

series ordinal

1

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5 February 2018

language of work or name

English

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publication date

3 June 2014

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5 February 2018

number of pages

3

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based on heuristic

inferred from page(s)

published in

Bioinformatics

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5 February 2018

volume

30

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issue

18

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5 February 2018

page(s)

2656-2658

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5 February 2018

Considering transposable element diversification in de novo annotation approaches

cites work

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTU365

In search of lost trajectories: Recovering the diversification of transposable elements

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTU365

Repbase Update, a database of eukaryotic repetitive elements

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTU365

ReAS: Recovery of ancestral sequences for transposable elements from the unassembled reads of a whole genome shotgun

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTU365

Graph-based clustering and characterization of repetitive sequences in next-generation sequencing data.

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTU365

RepeatExplorer: a Galaxy-based web server for genome-wide characterization of eukaryotic repetitive elements from next-generation sequence reads.

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTU365

De novo repeat classification and fragment assembly

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTU365

Oases: robust de novo RNA-seq assembly across the dynamic range of expression levels

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTU365

Velvet: algorithms for de novo short read assembly using de Bruijn graphs

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTU365

10.1093/BIOINFORMATICS/BTU365

21 January 2018

Identifiers

DOI

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5 February 2018

journals/bioinformatics/ZytnickiAQ14

DBLP publication ID

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DBLP Dataset 2021-01-02

28 January 2021

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5 February 2018