(Q48078203)

8 February 2018

title

A ribonuclease III domain protein functions in group II intron splicing in maize chloroplasts (English)

1 reference

8 February 2018

author name string

Kenneth P Watkins

1

1 reference

8 February 2018

Tiffany S Kroeger

2

1 reference

8 February 2018

Amy M Cooke

3

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8 February 2018

Rosalind E Williams-Carrier

4

1 reference

8 February 2018

Giulia Friso

5

1 reference

8 February 2018

Susan E Belcher

6

1 reference

8 February 2018

Klaas J van Wijk

7

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8 February 2018

Alice Barkan

8

1 reference

8 February 2018

publication date

10 August 2007

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8 February 2018

published in

The Plant Cell

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8 February 2018

volume

19

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8 February 2018

issue

8

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8 February 2018

page(s)

2606-2623

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8 February 2018

Probing the mechanisms of DEAD-box proteins as general RNA chaperones: the C-terminal domain of CYT-19 mediates general recognition of RNA.

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26 August 2018

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Involvement of DEAD-box proteins in group I and group II intron splicing. Biochemical characterization of Mss116p, ATP hydrolysis-dependent and -independent mechanisms, and general RNA chaperone activity

26 August 2018

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Arabidopsis orthologs of maize chloroplast splicing factors promote splicing of orthologous and species-specific group II introns.

26 August 2018

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A pentatricopeptide repeat protein facilitates the trans-splicing of the maize chloroplast rps12 pre-mRNA.

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A DEAD-box protein alone promotes group II intron splicing and reverse splicing by acting as an RNA chaperone

26 August 2018

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A novel multifunctional factor involved in trans-splicing of chloroplast introns in Chlamydomonas

26 August 2018

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RNA immunoprecipitation and microarray analysis show a chloroplast Pentatricopeptide repeat protein to be associated with the 5' region of mRNAs whose translation it activates

26 August 2018

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The splicing of yeast mitochondrial group I and group II introns requires a DEAD-box protein with RNA chaperone function

26 August 2018

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The Drosha-DGCR8 complex in primary microRNA processing

26 August 2018

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Mobile group II introns

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Structural analysis of the group II intron splicing factor CRS2 yields insights into its protein and RNA interaction surfaces.

26 August 2018

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Mutational analysis of the nuclease domain of Escherichia coli ribonuclease III. Identification of conserved acidic residues that are important for catalytic function in vitro

26 August 2018

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Evidence for reassociation of RNA-binding proteins after cell lysis: implications for the interpretation of immunoprecipitation analyses

26 August 2018

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Single processing center models for human Dicer and bacterial RNase III

26 August 2018

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Genetics and genomics of chloroplast biogenesis: maize as a model system

26 August 2018

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Assembly of an active group II intron-maturase complex by protein dimerization

26 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2002627

A chloroplast‐localized PPR protein required for plastid ribosome accumulation

26 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2002627

Effects of Maturase Binding and Mg2+ Concentration on Group II Intron RNA Folding Investigated by UV Cross-Linking

26 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2002627

Group II intron splicing factors derived by diversification of an ancient RNA-binding domain

26 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2002627

RNAse III-mediated degradation of unspliced pre-mRNAs and lariat introns

26 August 2018

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A novel mechanism for protein-assisted group I intron splicing.

26 August 2018

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Tobacco etch virus protease: mechanism of autolysis and rational design of stable mutants with wild-type catalytic proficiency

26 August 2018

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Prediction of organellar targeting signals

26 August 2018

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Mechanism of maturase-promoted group II intron splicing

26 August 2018

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2002627

Crystallographic and modeling studies of RNase III suggest a mechanism for double-stranded RNA cleavage

26 August 2018

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2002627

Intrinsic double-stranded-RNA processing activity of Escherichia coli ribonuclease III lacking the dsRNA-binding domain

26 August 2018

1 reference

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CRS1 is a novel group II intron splicing factor that was derived from a domain of ancient origin.

26 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2002627

The ins and outs of group II introns

26 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2002627

Mechanism of action of Escherichia coli ribonuclease III. Stringent chemical requirement for the glutamic acid 117 side chain and Mn2+ rescue of the Glu117Asp mutant

26 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2002627

Identification of an RNA-protein complex involved in chloroplast group II intron trans-splicing in Chlamydomonas reinhardtii

26 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2002627

Recruitment of a peptidyl-tRNA hydrolase as a facilitator of group II intron splicing in chloroplasts

26 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2002627

The PPR motif - a TPR-related motif prevalent in plant organellar proteins

26 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2002627

26 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2002627

Comparative analysis of splicing of the complete set of chloroplast group II introns in three higher plant mutants

26 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2002627

Splicing and intron-internal RNA editing of trnK-matK transcripts in barley plastids: support for MatK as an essential splice factor

26 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2002627

Nuclear mutations that block group II RNA splicing in maize chloroplasts reveal several intron classes with distinct requirements for splicing factors

26 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2002627

Mass Spectrometric Sequencing of Proteins from Silver-Stained Polyacrylamide Gels

26 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2002627

How to measure and predict the molar absorption coefficient of a protein

26 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2002627

A double-filter method for nitrocellulose-filter binding: application to protein-nucleic acid interactions

26 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2002627

A nuclear mutation in maize blocks the processing and translation of several chloroplast mRNAs and provides evidence for the differential translation of alternative mRNA forms.

26 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2002627

Inefficient rpl2 splicing in barley mutants with ribosome-deficient plastids

26 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2002627

Two nuclear mutations disrupt distinct pathways for targeting proteins to the chloroplast thylakoid

26 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2002627

Efficient protein-facilitated splicing of the yeast mitochondrial bI5 intron

26 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2002627

A method for the quantitative recovery of protein in dilute solution in the presence of detergents and lipids

26 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2002627

Comparative and functional anatomy of group II catalytic introns--a review

26 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2002627

Somatically heritable switches in the DNA modification of Mu transposable elements monitored with a suppressible mutant in maize

26 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2002627

A DEAD protein that activates intron self-splicing without unwinding RNA

26 August 2018

1 reference

12 December 2020

Trans-splicing mutants of Chlamydomonas reinhardtii

1 reference

12 December 2020

Nuclear Mutants of Maize with Defects in Chloroplast Polysome Assembly Have Altered Chloroplast RNA Metabolism

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12 December 2020

Structural perspective on the activation of RNase P RNA by protein

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12 December 2020

HCF152, an Arabidopsis RNA binding pentatricopeptide repeat protein involved in the processing of chloroplast psbB-psbT-psbH-petB-petD RNAs

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12 December 2020

CRS1, a chloroplast group II intron splicing factor, promotes intron folding through specific interactions with two intron domains

1 reference

12 December 2020

Identifiers

DOI

10.1105/TPC.107.053736

1 reference

8 February 2018

PMC publication ID

2002627

0 references

1 reference

8 February 2018