(Q48400543)

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Secondary structure based analysis and classification of biological interfaces: identification of binding motifs in protein-protein interactions

scientific article published on 17 May 2007

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scholarly article

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Europe PubMed Central

PubMed publication ID

11 February 2018

http://europepmc.org/abstract/MED/17510165

Secondary structure based analysis and classification of biological interfaces: identification of binding motifs in protein-protein interactions (English)

1 reference

Europe PubMed Central

PubMed publication ID

11 February 2018

http://europepmc.org/abstract/MED/17510165

protein structure

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protein-protein interaction

1 reference

based on heuristic

inferred from title

author name string

Mainak Guharoy

1

1 reference

Europe PubMed Central

PubMed publication ID

11 February 2018

http://europepmc.org/abstract/MED/17510165

Pinak Chakrabarti

2

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Europe PubMed Central

PubMed publication ID

11 February 2018

http://europepmc.org/abstract/MED/17510165

language of work or name

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publication date

17 May 2007

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Europe PubMed Central

PubMed publication ID

11 February 2018

http://europepmc.org/abstract/MED/17510165

number of pages

10

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based on heuristic

inferred from page(s)

1 reference

Europe PubMed Central

PubMed publication ID

11 February 2018

http://europepmc.org/abstract/MED/17510165

23

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Europe PubMed Central

PubMed publication ID

11 February 2018

http://europepmc.org/abstract/MED/17510165

15

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Europe PubMed Central

PubMed publication ID

11 February 2018

http://europepmc.org/abstract/MED/17510165

1909-1918

1 reference

Europe PubMed Central

PubMed publication ID

11 February 2018

http://europepmc.org/abstract/MED/17510165

InterPreTS: protein interaction prediction through tertiary structure.

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTM274

21 January 2018

SCOP database in 2004: refinements integrate structure and sequence family data

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTM274

21 January 2018

Dissecting subunit interfaces in homodimeric proteins

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTM274

21 January 2018

A dissection of specific and non-specific protein-protein interfaces

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTM274

21 January 2018

The Protein Data Bank

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTM274

21 January 2018

Anatomy of hot spots in protein interfaces

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTM274

21 January 2018

One thousand families for the molecular biologist

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTM274

21 January 2018

PIBASE: a comprehensive database of structurally defined protein interfaces

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTM274

21 January 2018

Interaction preferences across protein-protein interfaces of obligatory and non-obligatory components are different

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTM274

21 January 2018

ICBS: a database of interactions between protein chains mediated by beta-sheet formation

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTM274

21 January 2018

DOCKGROUND resource for studying protein-protein interfaces

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTM274

21 January 2018

Conservation and relative importance of residues across protein-protein interfaces

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTM274

21 January 2018

Four helix bundle diversity in globular proteins

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTM274

21 January 2018

An algorithm for predicting protein-protein interaction sites: Abnormally exposed amino acid residues and secondary structure elements

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTM274

21 January 2018

The role of geometric complementarity in secondary structure packing: a systematic docking study.

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTM274

21 January 2018

Principles of protein-protein interactions

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTM274

21 January 2018

Dictionary of protein secondary structure: pattern recognition of hydrogen-bonded and geometrical features

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTM274

21 January 2018

A new, structurally nonredundant, diverse data set of protein-protein interfaces and its implications

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTM274

21 January 2018

Favorable scaffolds: proteins with different sequence, structure and function may associate in similar ways

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTM274

21 January 2018

PROTCOM: searchable database of protein complexes enhanced with domain-domain structures

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTM274

21 January 2018

A study of four-helix bundles: investigating protein folding via similar architectural motifs in protein cores and in subunit interfaces

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTM274

21 January 2018

The atomic structure of protein-protein recognition sites

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTM274

21 January 2018

ProMate: a structure based prediction program to identify the location of protein-protein binding sites

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTM274

21 January 2018

Analysing six types of protein-protein interfaces

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTM274

21 January 2018

3(10)-Helix adjoining alpha-helix and beta-strand: sequence and structural features and their conservation.

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTM274

21 January 2018

The CATH database: an extended protein family resource for structural and functional genomics

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTM274

21 January 2018

Natural beta-sheet proteins use negative design to avoid edge-to-edge aggregation

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTM274

21 January 2018

Interresidue contacts in proteins and protein-protein interfaces and their use in characterizing the homodimeric interface.

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTM274

21 January 2018

ProFace: a server for the analysis of the physicochemical features of protein-protein interfaces

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTM274

21 January 2018

3did: interacting protein domains of known three-dimensional structure

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTM274

21 January 2018

Hydrophobic folding units at protein-protein interfaces: implications to protein folding and to protein-protein association

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTM274

21 January 2018

Protein-protein interfaces: architectures and interactions in protein-protein interfaces and in protein cores. Their similarities and differences

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTM274

21 January 2018

Structural motifs at protein-protein interfaces: protein cores versus two-state and three-state model complexes

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTM274

21 January 2018

SCOPPI: a structural classification of protein-protein interfaces

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTM274

21 January 2018

Statistical analysis of predominantly transient protein-protein interfaces

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTM274

21 January 2018

Ten thousand interactions for the molecular biologist

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTM274

21 January 2018

Identifiers

10.1093/BIOINFORMATICS/BTM274

1 reference

Europe PubMed Central

PubMed publication ID

11 February 2018

http://europepmc.org/abstract/MED/17510165

DBLP publication ID

journals/bioinformatics/GuharoyC07

1 reference

DBLP Dataset 2021-01-02

28 January 2021

PubMed publication ID

1 reference

Europe PubMed Central

PubMed publication ID

11 February 2018

http://europepmc.org/abstract/MED/17510165

ResearchGate publication ID

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