(Q48411685)

11 February 2018

title

PhyloGena--a user-friendly system for automated phylogenetic annotation of unknown sequences. (English)

1 reference

11 February 2018

0 references

1 reference

3

1 reference

11 February 2018

author name string

Kristian Hanekamp

series ordinal

1

1 reference

11 February 2018

Uta Bohnebeck

series ordinal

2

1 reference

11 February 2018

Klaus Valentin

series ordinal

4

1 reference

11 February 2018

language of work or name

English

0 references

publication date

1 March 2007

1 reference

11 February 2018

number of pages

9

1 reference

based on heuristic

inferred from page(s)

published in

Bioinformatics

1 reference

11 February 2018

volume

23

1 reference

11 February 2018

issue

7

1 reference

11 February 2018

page(s)

793-801

1 reference

11 February 2018

Gapped BLAST and PSI-BLAST: a new generation of protein database search programs

cites work

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTM016

The Genome of the Diatom Thalassiosira Pseudonana: Ecology, Evolution, and Metabolism

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTM016

The deep roots of eukaryotes

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTM016

The Jalview Java alignment editor

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTM016

BIBI, a bioinformatics bacterial identification tool

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTM016

MUSCLE: multiple sequence alignment with high accuracy and high throughput

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTM016

Phylogenomics: improving functional predictions for uncharacterized genes by evolutionary analysis

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTM016

PhyloGenie: automated phylome generation and analysis

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTM016

Combining partial order alignment and progressive multiple sequence alignment increases alignment speed and scalability to very large alignment problems

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTM016

A Simple, Fast, and Accurate Algorithm to Estimate Large Phylogenies by Maximum Likelihood

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTM016

QuickTree: building huge Neighbour-Joining trees of protein sequences.

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTM016

A first glimpse into the pattern and scale of gene transfer in Apicomplexa

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTM016

CLUSTAL W: improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTM016

MAFFT version 5: improvement in accuracy of multiple sequence alignment

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTM016

UNITE: a database providing web-based methods for the molecular identification of ectomycorrhizal fungi

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTM016

The closest BLAST hit is often not the nearest neighbor.

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTM016

Kalign--an accurate and fast multiple sequence alignment algorithm

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTM016

PRIMARY AND SECONDARY ENDOSYMBIOSIS AND THE ORIGIN OF PLASTIDS

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTM016

DIALIGN 2: improvement of the segment-to-segment approach to multiple sequence alignment

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTM016

Surfection: a new platform for transfected cell arrays

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTM016

galaxie--CGI scripts for sequence identification through automated phylogenetic analysis.

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTM016

T-Coffee: A novel method for fast and accurate multiple sequence alignment

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTM016

A phylogenomic approach to microbial evolution

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTM016

Detecting putative orthologs.

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTM016

ATV: display and manipulation of annotated phylogenetic trees

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTM016

10.1093/BIOINFORMATICS/BTM016

21 January 2018

Identifiers

DOI

1 reference

11 February 2018

journals/bioinformatics/HanekampBBV07

DBLP publication ID

1 reference

DBLP Dataset 2021-01-02

28 January 2021

1 reference

11 February 2018