(Q49819293)

15 June 2018

title

Non-B-form DNA is enriched at centromeres (English)

1 reference

15 June 2018

author name string

Sivakanthan Kasinathan

series ordinal

1

1 reference

15 June 2018

Steven Henikoff

series ordinal

2

1 reference

15 June 2018

publication date

1 April 2018

1 reference

15 June 2018

Molecular Biology and Evolution

published in

1 reference

15 June 2018

volume

35

1 reference

15 June 2018

issue

4

1 reference

15 June 2018

page(s)

949-962

1 reference

15 June 2018

Creative Commons Attribution-NonCommercial 4.0 International

copyright license

start time

24 March 2018

1 reference

April 2022 Public Data File from Crossref

copyright status

copyrighted

0 references

cites work

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16 June 2018

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DNA Sequence-Specific Binding of CENP-B Enhances the Fidelity of Human Centromere Function

16 June 2018

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A unique chromatin complex occupies young α-satellite arrays of human centromeres

16 June 2018

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Sequence features and transcriptional stalling within centromere DNA promote establishment of CENP-A chromatin.

16 June 2018

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16 June 2018

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Histone H4 Lys 20 monomethylation of the CENP-A nucleosome is essential for kinetochore assembly

16 June 2018

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16 June 2018

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16 June 2018

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16 June 2018

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16 June 2018

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16 June 2018

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The octamer is the major form of CENP-A nucleosomes at human centromeres

16 June 2018

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16 June 2018

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16 June 2018

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Comparative analysis of tandem repeats from hundreds of species reveals unique insights into centromere evolution

16 June 2018

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16 June 2018

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Neocentromeres and epigenetically inherited features of centromeres

16 June 2018

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16 June 2018

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16 June 2018

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16 June 2018

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16 June 2018

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Cancer-associated alteration of pericentromeric heterochromatin may contribute to chromosome instability

16 June 2018

1 reference

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Endogenous transcription at the centromere facilitates centromere activity in budding yeast

16 June 2018

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16 June 2018

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16 June 2018

1 reference

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Chickens possess centromeres with both extended tandem repeats and short non-tandem-repetitive sequences

16 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5889037

Centromere-localized breaks indicate the generation of DNA damage by the mitotic spindle.

16 June 2018

1 reference

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Adaptive evolution of foundation kinetochore proteins in primates

16 June 2018

1 reference

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Maize centromere structure and evolution: sequence analysis of centromeres 2 and 5 reveals dynamic Loci shaped primarily by retrotransposons

16 June 2018

1 reference

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Common ancestry of the CENP-A chaperones Scm3 and HJURP.

16 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5889037

Centromere-specific assembly of CENP-a nucleosomes is mediated by HJURP.

16 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5889037

Epigenetic regulation of centromeric chromatin: old dogs, new tricks?

16 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5889037

Hairpin structures formed by alpha satellite DNA of human centromeres are cleaved by human topoisomerase IIalpha

16 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5889037

Activation of Holliday junction recognizing protein involved in the chromosomal stability and immortality of cancer cells

16 June 2018

1 reference

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Epigenetic control of centromere behavior

16 June 2018

1 reference

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Centromere RNA is a key component for the assembly of nucleoproteins at the nucleolus and centromere

16 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5889037

Centromeres were derived from telomeres during the evolution of the eukaryotic chromosome

16 June 2018

1 reference

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Propagation of centromeric chromatin requires exit from mitosis.

16 June 2018

1 reference

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Quantifying similarity between motifs

16 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5889037

Centromeres put epigenetics in the driver's seat

16 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5889037

Cd-hit: a fast program for clustering and comparing large sets of protein or nucleotide sequences

16 June 2018

1 reference

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Phylogenetic and structural analysis of centromeric DNA and kinetochore proteins

16 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5889037

An improved map of conserved regulatory sites for Saccharomyces cerevisiae

16 June 2018

1 reference

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Mouse centric and pericentric satellite repeats form distinct functional heterochromatin

16 June 2018

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5889037

CENP-B box is required for de novo centromere chromatin assembly on human alphoid DNA.

16 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5889037

Triplex-forming DNAs in the human interphase nucleus visualized in situ by polypurine/polypyrimidine DNA probes and antitriplex antibodies

16 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5889037

Crystal structure of the CENP-B protein-DNA complex: the DNA-binding domains of CENP-B induce kinks in the CENP-B box DNA.

16 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5889037

The centromere paradox: stable inheritance with rapidly evolving DNA.

16 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5889037

EMBOSS: the European Molecular Biology Open Software Suite

16 June 2018

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Human centromeres and neocentromeres show identical distribution patterns of >20 functionally important kinetochore-associated proteins

16 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5889037

Neocentromeres and alpha satellite: a proposed structural code for functional human centromere DNA.

16 June 2018

1 reference

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The cenpB gene is not essential in mice

16 June 2018

1 reference

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Tandem repeats finder: a program to analyze DNA sequences

16 June 2018

1 reference

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A helix-turn-helix structure unit in human centromere protein B (CENP-B).

16 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5889037

The case for epigenetic effects on centromere identity and function.

16 June 2018

1 reference

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Centromeres, CENP-B and Tigger too.

16 June 2018

1 reference

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Formation of de novo centromeres and construction of first-generation human artificial microchromosomes

16 June 2018

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A single G-to-C change causes human centromere TGGAA repeats to fold back into hairpins

16 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5889037

Inverted repeats, stem-loops, and cruciforms: significance for initiation of DNA replication

16 June 2018

1 reference

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Centromere protein B of African green monkey cells: gene structure, cellular expression, and centromeric localization

16 June 2018

1 reference

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Surprising deficiency of CENP-B binding sites in African green monkey alpha-satellite DNA: implications for CENP-B function at centromeres

16 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5889037

The RNA polymerase I transcription factor UBF is a sequence-tolerant HMG-box protein that can recognize structured nucleic acids

16 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5889037

Presence and abundance of CENP-B box sequences in great ape subsets of primate-specific alpha-satellite DNA.

16 June 2018

1 reference

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DNA stem-loop structures bind poorly to histone octamer cores

16 June 2018

1 reference

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Nucleotide sequence of mouse satellite DNA.

16 June 2018

1 reference

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Sequence relationships between single repeat units of highly reiterated African Green monkey DNA

16 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5889037

The structure and function of yeast centromeres

16 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5889037

A human centromere antigen (CENP-B) interacts with a short specific sequence in alphoid DNA, a human centromeric satellite

16 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5889037

The organization of the mouse satellite DNA at centromeres.

16 June 2018

1 reference

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The chromatin structure of centromeres from fission yeast: differentiation of the central core that correlates with function

16 June 2018

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CENP-B is a highly conserved mammalian centromere protein with homology to the helix-loop-helix family of proteins

16 June 2018

1 reference

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Integration of human alpha-satellite DNA into simian chromosomes: centromere protein binding and disruption of normal chromosome segregation

16 June 2018

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Targeted in situ genome-wide profiling with high efficiency for low cell numbers.

16 June 2018

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A mitosis-specific and R loop-driven ATR pathway promotes faithful chromosome segregation.

14 August 2018

1 reference

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Expanded Satellite Repeats Amplify a Discrete CENP-A Nucleosome Assembly Site on Chromosomes that Drive in Female Meiosis.

14 August 2018

1 reference

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Short Inverted Repeats Are Hotspots for Genetic Instability: Relevance to Cancer Genomes.

14 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5889037

SIST: stress-induced structural transitions in superhelical DNA.

14 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5889037

Sequences associated with centromere competency in the human genome

14 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5889037

Genome sequencing and comparison of two nonhuman primate animal models, the cynomolgus and Chinese rhesus macaques

14 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5889037

Major evolutionary transitions in centromere complexity.

14 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5889037

Centromere-associated female meiotic drive entails male fitness costs in monkeyflowers

14 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5889037

Functional rice centromeres are marked by a satellite repeat and a centromere-specific retrotransposon

14 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5889037

Genetic definition and sequence analysis of Arabidopsis centromeres

14 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5889037

Highly repetitive component alpha and related alphoid DNAs in man and monkeys.

14 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5889037

14 August 2018

1 reference

12 December 2020

A functional neo-centromere formed through activation of a latent human centromere and consisting of non-alpha-satellite DNA

1 reference

PubMed

12 December 2020

Requirement of Mis6 centromere connector for localizing a CENP-A-like protein in fission yeast

1 reference

PubMed

12 December 2020

Distortion of female meiotic segregation and reduced male fertility in human Robertsonian translocations: consistent with the centromere model of co-evolving centromere DNA/centromeric histone (CENP-A)

1 reference

PubMed

12 December 2020

Identifiers

DOI

10.1093/MOLBEV/MSY010

1 reference

15 June 2018

release_a6q7mf5o3ra2rimgynlqdufgom

Fatcat ID

1 reference

Fatcat

https://api.fatcat.wiki/v0/release/a6q7mf5o3ra2rimgynlqdufgom

24 November 2022

mapped directly with Wikidata item

PMC publication ID

5889037

1 reference

15 June 2018

PubMed publication ID

29365169

1 reference

15 June 2018