(Q51349698)

4 April 2018

title

BioImageXD: an open, general-purpose and high-throughput image-processing platform (English)

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4 April 2018

author

Varpu Marjomäki

7

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4 April 2018

author name string

Pasi Kankaanpää

1

1 reference

4 April 2018

Lassi Paavolainen

2

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4 April 2018

Silja Tiitta

3

1 reference

4 April 2018

Mikko Karjalainen

4

1 reference

4 April 2018

Joacim Päivärinne

5

1 reference

4 April 2018

Jonna Nieminen

6

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4 April 2018

Jyrki Heino

8

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4 April 2018

Daniel J White

9

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4 April 2018

publication date

28 June 2012

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4 April 2018

published in

Nature Methods

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4 April 2018

volume

9

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4 April 2018

issue

7

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4 April 2018

page(s)

683-689

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4 April 2018

Visualization of image data from cells to organisms

cites work

1 reference

https://api.crossref.org/works/10.1038%2FNMETH.2047

Advances in light microscopy for neuroscience

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNMETH.2047

Bioimage informatics: a new area of engineering biology

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNMETH.2047

Visualization approaches for multidimensional biological image data

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNMETH.2047

What's in a picture? The temptation of image manipulation

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNMETH.2047

A guided tour into subcellular colocalization analysis in light microscopy

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNMETH.2047

Colocalization of fluorescent markers in confocal microscope images of plant cells

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNMETH.2047

Automatic and quantitative measurement of protein-protein colocalization in live cells.

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNMETH.2047

Quantitative digital analysis of diffuse and concentrated nuclear distributions of nascent transcripts, SC35 and poly(A).

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNMETH.2047

Visualizing biological data-now and in the future

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNMETH.2047

High-throughput fluorescence microscopy for systems biology

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNMETH.2047

Phenotypic profiling of the human genome by time-lapse microscopy reveals cell division genes

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNMETH.2047

Automated tracking and analysis of centrosomes in early Caenorhabditis elegans embryos

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNMETH.2047

High content analysis to determine cytotoxicity of the antimicrobial peptide, melittin and selected structural analogs

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNMETH.2047

Tools for visualizing multidimensional images from living specimens

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNMETH.2047

Metadata matters: access to image data in the real world

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNMETH.2047

Unified framework for development, deployment and robust testing of neuroimaging algorithms

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNMETH.2047

V3D enables real-time 3D visualization and quantitative analysis of large-scale biological image data sets

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNMETH.2047

VisBio: a computational tool for visualization of multidimensional biological image data

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNMETH.2047

The extracellular matrix: not just pretty fibrils

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNMETH.2047

Integrin alpha 2 cytoplasmic domain deletion effects: loss of adhesive activity parallels ligand-independent recruitment into focal adhesions

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNMETH.2047

Basic mechanism of three-dimensional collagen fibre transport by fibroblasts

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNMETH.2047

Clustering induces a lateral redistribution of alpha 2 beta 1 integrin from membrane rafts to caveolae and subsequent protein kinase C-dependent internalization.

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNMETH.2047

A Raft-derived, Pak1-regulated entry participates in alpha2beta1 integrin-dependent sorting to caveosomes

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNMETH.2047

Avoiding twisted pixels: ethical guidelines for the appropriate use and manipulation of scientific digital images

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNMETH.2047

Single-cell quantification of molecules and rates using open-source microscope-based cytometry

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNMETH.2047

The Open Microscopy Environment (OME) Data Model and XML file: open tools for informatics and quantitative analysis in biological imaging

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNMETH.2047

Preparing a scientific manuscript in Linux: Today's possibilities and limitations

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNMETH.2047

Icy: an open bioimage informatics platform for extended reproducible research.

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNMETH.2047

CellProfiler: free, versatile software for automated biological image analysis

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNMETH.2047

Fiji: an open-source platform for biological-image analysis

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNMETH.2047

Jararhagin-derived RKKH peptides induce structural changes in alpha1I domain of human integrin alpha1beta1

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNMETH.2047

The good, the bad and the ugly

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNMETH.2047

Engineering and algorithm design for an image processing Api: a technical report on ITK--the Insight Toolkit

21 January 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/22743773

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

1 reference

https://pubmed.ncbi.nlm.nih.gov/22743773

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Partial colocalization of glucocorticoid and mineralocorticoid receptors in discrete compartments in nuclei of rat hippocampus neurons

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/22743773

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1038/NMETH.2047

1 reference

4 April 2018

1 reference

4 April 2018