(Q51595449)

7 April 2018

title

Rise of the machines--recommendations for ecologists when using next generation sequencing for microsatellite development. (English)

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7 April 2018

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7 April 2018

Michael G. Gardner

object named as

Michael G Gardner

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1

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Andrew J Lowe

object named as

Andrew J Lowe

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4

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Alison J. Fitch

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2

object named as

Alison J Fitch

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publication date

16 June 2011

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7 April 2018

Molecular Ecology Resources

published in

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7 April 2018

volume

11

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issue

6

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7 April 2018

page(s)

1093-1101

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7 April 2018

describes a project that uses

massive parallel sequencing

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based on heuristic

inferred from title

cites work

Fast, cost-effective development of species-specific microsatellite markers by genomic sequencing.

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https://api.crossref.org/works/10.1111%2FJ.1755-0998.2011.03037.X

Alu repeats: a source for the genesis of primate microsatellites.

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1755-0998.2011.03037.X

Rapid identification of thousands of copperhead snake (Agkistrodon contortrix) microsatellite loci from modest amounts of 454 shotgun genome sequence

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1755-0998.2011.03037.X

Two Distinct Modes of Microsatellite Mutation Processes: Evidence From the Complete Genomic Sequences of Nine Species

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1755-0998.2011.03037.X

Sequencing goes 454 and takes large-scale genomics into the wild

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1755-0998.2011.03037.X

msatcommander: detection of microsatellite repeat arrays and automated, locus-specific primer design

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1755-0998.2011.03037.X

Accuracy and quality assessment of 454 GS-FLX Titanium pyrosequencing.

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1755-0998.2011.03037.X

Multi-locus inference of population structure: a comparison between single nucleotide polymorphisms and microsatellites

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1755-0998.2011.03037.X

Multiplex Manager 1.0: a cross-platform computer program that plans and optimizes multiplex PCR.

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1755-0998.2011.03037.X

A sharper Bonferroni procedure for multiple tests of significance

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1755-0998.2011.03037.X

What is a microsatellite: a computational and experimental definition based upon repeat mutational behavior at A/T and GT/AC repeats

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1755-0998.2011.03037.X

Representativeness of microsatellite distributions in genomes, as revealed by 454 GS-FLX titanium pyrosequencing.

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1755-0998.2011.03037.X

Localised sequence regions possessing high melting temperatures prevent the amplification of a DNA mimic in competitive PCR

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1755-0998.2011.03037.X

Comparative genomic analysis reveals species-dependent complexities that explain difficulties with microsatellite marker development in molluscs

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1755-0998.2011.03037.X

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1755-0998.2011.03037.X

Microsatellite flanking region similarities among different loci within insect species.

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1755-0998.2011.03037.X

QDD: a user-friendly program to select microsatellite markers and design primers from large sequencing projects.

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1755-0998.2011.03037.X

Detecting short tandem repeats from genome data: opening the software black box.

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1755-0998.2011.03037.X

A pyrosequencing-tailored nucleotide barcode design unveils opportunities for large-scale sample multiplexing

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1755-0998.2011.03037.X

A genomic portrait of human microsatellite variation

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1755-0998.2011.03037.X

Sequence determinants of human microsatellite variability.

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1755-0998.2011.03037.X

The structure of interrupted human AC microsatellites.

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1755-0998.2011.03037.X

Simple sequences are ubiquitous repetitive components of eukaryotic genomes.

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1755-0998.2011.03037.X

Mobile elements and the genesis of microsatellites in dipterans.

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1755-0998.2011.03037.X

Lepidopteran microsatellite DNA: redundant but promising

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1755-0998.2011.03037.X

On the use of large marker panels to estimate inbreeding and relatedness: empirical and simulation studies of a pedigreed zebra finch population typed at 771 SNPs

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1755-0998.2011.03037.X

On the Structural Differences Between Markers and Genomic AC Microsatellites

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1755-0998.2011.03037.X

10.1111/J.1755-0998.2011.03037.X

21 January 2018

Identifiers

DOI

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7 April 2018

PubMed ID

21679314

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7 April 2018