(Q51791978)

12 April 2018

title

Gene-sharing networks reveal organizing principles of transcriptomes in Arabidopsis and other multicellular organisms. (English)

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12 April 2018

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1 reference

Song Li

1

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12 April 2018

Sona Pandey

2

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12 April 2018

Timothy E Gookin

3

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12 April 2018

Zhixin Zhao

4

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12 April 2018

Liza Wilson

5

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12 April 2018

Sarah M Assmann

6

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12 April 2018

publication date

18 April 2012

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12 April 2018

published in

The Plant Cell

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12 April 2018

volume

24

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12 April 2018

issue

4

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12 April 2018

page(s)

1362-1378

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12 April 2018

Analysis of anther transcriptomes to identify genes contributing to meiosis and male gametophyte development in rice

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29 September 2018

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29 September 2018

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29 September 2018

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29 September 2018

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29 September 2018

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Comparison of scores for bimodality of gene expression distributions and genome-wide evaluation of the prognostic relevance of high-scoring genes.

29 September 2018

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29 September 2018

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29 September 2018

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29 September 2018

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A systems approach uncovers restrictions for signal interactions regulating genome-wide responses to nutritional cues in Arabidopsis

29 September 2018

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Sumoylation of ABI5 by the Arabidopsis SUMO E3 ligase SIZ1 negatively regulates abscisic acid signaling

29 September 2018

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A transcriptome atlas of rice cell types uncovers cellular, functional and developmental hierarchies

29 September 2018

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Functional proteomics of Arabidopsis thaliana guard cells uncovers new stomatal signaling pathways

29 September 2018

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The origins of multicellularity and the early history of the genetic toolkit for animal development

29 September 2018

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Drought induction of Arabidopsis 9-cis-epoxycarotenoid dioxygenase occurs in vascular parenchyma cells

29 September 2018

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GeneCAT--novel webtools that combine BLAST and co-expression analyses.

29 September 2018

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CressExpress: a tool for large-scale mining of expression data from Arabidopsis

29 September 2018

1 reference

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Update of ASRP: the Arabidopsis Small RNA Project database

29 September 2018

1 reference

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A high-resolution root spatiotemporal map reveals dominant expression patterns.

29 September 2018

1 reference

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Near linear time algorithm to detect community structures in large-scale networks.

29 September 2018

1 reference

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Detecting and profiling tissue-selective genes

29 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3398552

PACK: Profile Analysis using Clustering and Kurtosis to find molecular classifiers in cancer

29 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3398552

Improved scoring of functional groups from gene expression data by decorrelating GO graph structure

29 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3398552

G-protein complex mutants are hypersensitive to abscisic acid regulation of germination and postgermination development.

29 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3398552

The Arabidopsis SUMO E3 ligase SIZ1 controls phosphate deficiency responses.

29 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3398552

A gene expression map of Arabidopsis thaliana development

29 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3398552

Finding community structure in very large networks

29 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3398552

Gene co-expression network topology provides a framework for molecular characterization of cellular state

29 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3398552

Just-in-time transcription program in metabolic pathways

29 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3398552

A gene atlas of the mouse and human protein-encoding transcriptomes

29 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3398552

Universality and flexibility in gene expression from bacteria to human

29 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3398552

A gene expression map of the Arabidopsis root

29 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3398552

A gene-coexpression network for global discovery of conserved genetic modules

29 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3398552

Genome-wide insertional mutagenesis of Arabidopsis thaliana

29 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3398552

NADPH oxidase AtrbohD and AtrbohF genes function in ROS-dependent ABA signaling in Arabidopsis.

29 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3398552

Expression profiling of the whole Arabidopsis shaggy-like kinase multigene family by real-time reverse transcriptase-polymerase chain reaction.

29 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3398552

Building a Multicellular Organism

29 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3398552

Detecting selective expression of genes and proteins

29 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3398552

The Botany Array Resource: e-Northerns, Expression Angling, and promoter analyses

29 September 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/22517316

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1105/TPC.111.094748

1 reference

12 April 2018

0 references

1 reference

12 April 2018