(Q51822132)

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:19216929%20AND%20SRC:MED&resulttype=core&format=json

21 January 2020

title

Analyzing enzymatic pH activity profiles and protein titration curves using structure-based pKa calculations and titration curve fitting (English)

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:19216929%20AND%20SRC:MED&resulttype=core&format=json

21 January 2020

1

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:19216929%20AND%20SRC:MED&resulttype=core&format=json

21 January 2020

author name string

Jens Erik Nielsen

series ordinal

1

1 reference

13 April 2018

http://europepmc.org/abstract/MED/19216929

language of work or name

English

0 references

publication date

1 January 2009

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:19216929%20AND%20SRC:MED&resulttype=core&format=json

21 January 2020

published in

Methods in Enzymology

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:19216929%20AND%20SRC:MED&resulttype=core&format=json

21 January 2020

volume

454

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:19216929%20AND%20SRC:MED&resulttype=core&format=json

21 January 2020

page(s)

233-258

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:19216929%20AND%20SRC:MED&resulttype=core&format=json

Incorporating protein conformational flexibility into the calculation of pH-dependent protein properties

21 January 2020

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Energetics of protein folding

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Protonation of interacting residues in a protein by a Monte Carlo method: application to lysozyme and the photosynthetic reaction center of Rhodobacter sphaeroides

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Pore-opening mechanism of the nicotinic acetylcholine receptor evinced by proton transfer

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Combining conformational flexibility and continuum electrostatics for calculating pK(a)s in proteins

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H++: a server for estimating pKas and adding missing hydrogens to macromolecules

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Hydrogen bonding and catalysis: a novel explanation for how a single amino acid substitution can change the pH optimum of a glycosidase

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7 January 2021

Constant pH molecular dynamics with proton tautomerism

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The pKa of the general acid/base carboxyl group of a glycosidase cycles during catalysis: a 13C-NMR study of bacillus circulans xylanase

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Constant pH molecular dynamics in generalized Born implicit solvent

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A simple clustering algorithm can be accurate enough for use in calculations of pKs in macromolecules

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7 January 2021

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On the evaluation and optimization of protein X-ray structures for pKa calculations

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Electrostatic basis for the unidirectionality of the primary proton transfer in cytochrome c oxidase.

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The effect of protein relaxation on charge-charge interactions and dielectric constants of proteins

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7 January 2021

Determination of electrostatic interaction energies and protonation state populations in enzyme active sites.

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7 January 2021

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7 January 2021

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7 January 2021

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7 January 2021

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7 January 2021

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7 January 2021

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7 January 2021

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Identifiers

DOI

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:19216929%20AND%20SRC:MED&resulttype=core&format=json

21 January 2020

1 reference