(Q30369639)

15 August 2017

Electrostatic basis for the unidirectionality of the primary proton transfer in cytochrome c oxidase. (English)

1 reference

15 August 2017

Andrei V Pisliakov

1

0 references

Maciej Haranczyk

object named as

Maciej Haranczyk

series ordinal

4

0 references

Arieh Warshel

series ordinal

5

object named as

Arieh Warshel

1 reference

15 August 2017

Pankaz K Sharma

2

1 reference

15 August 2017

Zhen T Chu

series ordinal

3

1 reference

15 August 2017

language of work or name

English

0 references

publication date

28 May 2008

1 reference

Proceedings of the National Academy of Sciences of the United States of America

15 August 2017

1 reference

15 August 2017

105

1 reference

15 August 2017

22

1 reference

15 August 2017

7726-7731

1 reference

Redox-coupled proton pumping in cytochrome c oxidase: further insights from computer simulation

15 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2409407

Time-resolved ATR-FTIR spectroscopy of the oxygen reaction in the D124N mutant of cytochrome c oxidase from Paracoccus denitrificans

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2409407

Exploring pathways and barriers for coupled ET/PT in cytochrome c oxidase: a general framework for examining energetics and mechanistic alternatives.

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2409407

Kinetic models of redox-coupled proton pumping

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2409407

Modeling electrostatic effects in proteins

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2409407

Electrostatic environment of hemes in proteins: pK(a)s of hydroxyl ligands

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2409407

The barrier for proton transport in aquaporins as a challenge for electrostatic models: the role of protein relaxation in mutational calculations

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2409407

Energy transduction: proton transfer through the respiratory complexes

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2409407

Monte Carlo simulations of proton pumps: on the working principles of the biological valve that controls proton pumping in cytochrome c oxidase

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2409407

Gating of proton and water transfer in the respiratory enzyme cytochrome c oxidase.

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2409407

Computer simulation of explicit proton translocation in cytochrome c oxidase: the D-pathway

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2409407

Dynamic water networks in cytochrome C oxidase from Paracoccus denitrificans investigated by molecular dynamics simulations

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2409407

Redox-driven proton pumping by heme-copper oxidases

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2409407

The X-ray crystal structures of wild-type and EQ(I-286) mutant cytochrome c oxidases from Rhodobacter sphaeroides

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2409407

Cytochrome c oxidase: structure and spectroscopy

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2409407

Redox-coupled crystal structural changes in bovine heart cytochrome c oxidase

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2409407

Structure at 2.7 A resolution of the Paracoccus denitrificans two-subunit cytochrome c oxidase complexed with an antibody FV fragment

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2409407

Proton pump coupled to cytochrome c oxidase in mitochondria

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2409407

A mutation in subunit I of cytochrome oxidase from Rhodobacter sphaeroides results in an increase in steady-state activity but completely eliminates proton pumping

3 June 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0800580105

G204D, a mutation that blocks the proton-conducting D-channel of the aa3-type cytochrome c oxidase from Rhodobacter sphaeroides

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0800580105

Water-gated mechanism of proton translocation by cytochrome c oxidase

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0800580105

Conformational changes in azurin from Pseudomona aeruginosa induced through chemical and physical protocols

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0800580105

Electrostatic study of the proton pumping mechanism in bovine heart cytochrome C oxidase

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0800580105

Simulating redox coupled proton transfer in cytochrome c oxidase: looking for the proton bottleneck.

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0800580105

Realistic simulations of proton transport along the gramicidin channel: demonstrating the importance of solvation effects

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0800580105

Water chain formation and possible proton pumping routes in Rhodobacter sphaeroides cytochrome c oxidase: a molecular dynamics comparison of the wild type and R481K mutant

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0800580105

Using a charging coordinate in studies of ionization induced partial unfolding

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0800580105

Structure and dynamics of a proton shuttle in cytochrome c oxidase

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0800580105

Tracing the D-pathway in reconstituted site-directed mutants of cytochrome c oxidase from Paracoccus denitrificans

21 January 2018

1 reference

12 December 2020

Deuterium isotope effect of proton pumping in cytochrome c oxidase

1 reference

12 December 2020

Energy diagrams and mechanism for proton pumping in cytochrome c oxidase

1 reference

12 December 2020

Relocation of an internal proton donor in cytochrome c oxidase results in an altered pK(a) and a non-integer pumping stoichiometry

1 reference

12 December 2020

Simulation of enzyme reactions using valence bond force fields and other hybrid quantum/classical approaches

1 reference

11 October 2022

https://opencitations.net/index/coci/api/v1/references/10.1073/PNAS.0800580105

Identifiers

DOI

10.1073/PNAS.0800580105

1 reference

15 August 2017

0 references

1 reference

15 August 2017

PubMed publication ID

18509049

1 reference