(Q30477278)

English

Monte Carlo simulations of proton pumps: on the working principles of the biological valve that controls proton pumping in cytochrome c oxidase

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scholarly article

1 reference

Europe PubMed Central

PMC publication ID

13 October 2017

Monte Carlo simulations of proton pumps: on the working principles of the biological valve that controls proton pumping in cytochrome c oxidase (English)

1 reference

Europe PubMed Central

PMC publication ID

13 October 2017

Monte Carlo method

1 reference

based on heuristic

inferred from title

2

object named as

Arieh Warshel

1 reference

Europe PubMed Central

PMC publication ID

13 October 2017

author name string

Mats H M Olsson

1

1 reference

Europe PubMed Central

PMC publication ID

13 October 2017

language of work or name

0 references

publication date

13 April 2006

1 reference

Europe PubMed Central

PMC publication ID

13 October 2017

Proceedings of the National Academy of Sciences of the United States of America

1 reference

Europe PubMed Central

PMC publication ID

13 October 2017

103

1 reference

Europe PubMed Central

PMC publication ID

13 October 2017

17

1 reference

Europe PubMed Central

PMC publication ID

13 October 2017

6500-6505

1 reference

Europe PubMed Central

PMC publication ID

13 October 2017

Electrostatic control of the efficiency of light-induced electron transfer across membranes

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1458913

20 June 2018

Titration behavior of residues at the entrance of the D-pathway of cytochrome c oxidase from paracoccus denitrificans investigated by continuum electrostatic calculations

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1458913

20 June 2018

Gating of proton and water transfer in the respiratory enzyme cytochrome c oxidase.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1458913

20 June 2018

Computer simulation of explicit proton translocation in cytochrome c oxidase: the D-pathway

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1458913

20 June 2018

Stochastic reaction-diffusion simulation with MesoRD.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1458913

20 June 2018

Studies of proton translocations in biological systems: simulating proton transport in carbonic anhydrase by EVB-based models

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1458913

20 June 2018

Structural elements involved in electron-coupled proton transfer in cytochrome c oxidase

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1458913

20 June 2018

Dynamic water networks in cytochrome C oxidase from Paracoccus denitrificans investigated by molecular dynamics simulations

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1458913

20 June 2018

Dynamics of electron transfer pathways in cytochrome C oxidase

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1458913

20 June 2018

What really prevents proton transport through aquaporin? Charge self-energy versus proton wire proposals

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1458913

20 June 2018

Redox-driven proton pumping by heme-copper oxidases

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1458913

20 June 2018

Understanding the mechanism of proton movement linked to oxygen reduction in cytochrome c oxidase: lessons from other proteins

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1458913

20 June 2018

Influence of structure, pH and membrane potential on proton movement in cytochrome oxidase.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1458913

20 June 2018

What are the dielectric "constants" of proteins and how to validate electrostatic models?

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1458913

20 June 2018

Simulating proton translocations in proteins: probing proton transfer pathways in the Rhodobacter sphaeroides reaction center

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1458913

20 June 2018

Cytochrome c oxidase: structure and spectroscopy

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1458913

20 June 2018

Redox-coupled crystal structural changes in bovine heart cytochrome c oxidase

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1458913

20 June 2018

Structure at 2.7 A resolution of the Paracoccus denitrificans two-subunit cytochrome c oxidase complexed with an antibody FV fragment

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1458913

20 June 2018

Internal electron-transfer reactions in cytochrome c oxidase

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1458913

20 June 2018

Control of the redox potential of cytochrome c and microscopic dielectric effects in proteins.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1458913

20 June 2018

Conversion of light energy to electrostatic energy in the proton pump of Halobacterium halobium

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1458913

20 June 2018

Proton pump coupled to cytochrome c oxidase in mitochondria

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1458913

20 June 2018

A mutation in subunit I of cytochrome oxidase from Rhodobacter sphaeroides results in an increase in steady-state activity but completely eliminates proton pumping

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0510860103

21 January 2018

Simulating redox coupled proton transfer in cytochrome c oxidase: looking for the proton bottleneck.

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0510860103

21 January 2018

Water-gated mechanism of proton translocation by cytochrome c oxidase

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0510860103

21 January 2018

Conformational changes in azurin from Pseudomona aeruginosa induced through chemical and physical protocols

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0510860103

21 January 2018

A general method for numerically simulating the stochastic time evolution of coupled chemical reactions

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0510860103

21 January 2018

Pathways for electron tunneling in cytochrome c oxidase

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0510860103

21 January 2018

DFT/electrostatic calculations of pK(a) values in cytochrome c oxidase

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1458913

26 November 2018

Heme/Copper Terminal Oxidases

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0510860103

21 January 2018

Oxygen and proton pathways in cytochrome c oxidase

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0510860103

21 January 2018

Identifiers

10.1073/PNAS.0510860103

1 reference

Europe PubMed Central

PMC publication ID

13 October 2017

2006PNAS..103.6500O

0 references

PMC publication ID

1 reference

Europe PubMed Central

PMC publication ID

13 October 2017

PubMed publication ID

1 reference

Europe PubMed Central

PMC publication ID

13 October 2017

ResearchGate publication ID

0 references

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