(Q51905939)

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Transient violations of the second law of thermodynamics in protein unfolding examined using synthetic atomic force microscopy and the fluctuation theorem.

scientific article published in September 2007

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Europe PubMed Central

PubMed publication ID

17 April 2018

http://europepmc.org/abstract/MED/17867784

Transient violations of the second law of thermodynamics in protein unfolding examined using synthetic atomic force microscopy and the fluctuation theorem. (English)

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Europe PubMed Central

PubMed publication ID

17 April 2018

http://europepmc.org/abstract/MED/17867784

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Gregory A. Voth

3

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Gregory A Voth

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Europe PubMed Central

PubMed publication ID

17 April 2018

author name string

Sterling Paramore

1

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Europe PubMed Central

PubMed publication ID

17 April 2018

http://europepmc.org/abstract/MED/17867784

Gary S Ayton

2

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Europe PubMed Central

PubMed publication ID

17 April 2018

http://europepmc.org/abstract/MED/17867784

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publication date

1 September 2007

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Europe PubMed Central

PubMed publication ID

17 April 2018

http://europepmc.org/abstract/MED/17867784

Journal of Chemical Physics

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Europe PubMed Central

PubMed publication ID

17 April 2018

http://europepmc.org/abstract/MED/17867784

127

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Europe PubMed Central

PubMed publication ID

17 April 2018

http://europepmc.org/abstract/MED/17867784

10

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Europe PubMed Central

PubMed publication ID

17 April 2018

http://europepmc.org/abstract/MED/17867784

105105

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Europe PubMed Central

PubMed publication ID

17 April 2018

http://europepmc.org/abstract/MED/17867784

Mechanical and chemical unfolding of a single protein: a comparison

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The mechanical stability of immunoglobulin and fibronectin III domains in the muscle protein titin measured by atomic force microscopy

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States and transitions during forced unfolding of a single spectrin repeat.

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Pathways and intermediates in forced unfolding of spectrin repeats

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Cooperativity in forced unfolding of tandem spectrin repeats

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Pathway shifts and thermal softening in temperature-coupled forced unfolding of spectrin domains

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Spectrin domains lose cooperativity in forced unfolding

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Unfolding of titin immunoglobulin domains by steered molecular dynamics simulation

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Unfolding proteins by external forces and temperature: the importance of topology and energetics

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Dynamic strength of molecular adhesion bonds

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Energy landscape distortions and the mechanical unfolding of proteins

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Crystal structure of the alpha-actinin rod reveals an extensive torsional twist

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Structural insights into the stability and flexibility of unusual erythroid spectrin repeats

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Ligand binding: molecular mechanics calculation of the streptavidin-biotin rupture force

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Calculating the bulk modulus for a lipid bilayer with nonequilibrium molecular dynamics simulation

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Probability of second law violations in shearing steady states

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Equilibrium microstates which generate second law violating steady states

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The Fluctuation Theorem

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Entropy production fluctuation theorem and the nonequilibrium work relation for free energy differences

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Experimental Demonstration of Violations of the Second Law of Thermodynamics for Small Systems and Short Time Scales

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Fluctuations and irreversibility: an experimental demonstration of a second-law-like theorem using a colloidal particle held in an optical trap.

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Verification of the Crooks fluctuation theorem and recovery of RNA folding free energies

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Time-dependent fluctuation theorem.

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Reversibility in nonequilibrium trajectories of an optically trapped particle.

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The Nonequilibrium Thermodynamics of Small Systems

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THE weighted histogram analysis method for free-energy calculations on biomolecules. I. The method

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Nonequilibrium Equality for Free Energy Differences

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Comparison of efficiency and bias of free energies computed by exponential averaging, the Bennett acceptance ratio, and thermodynamic integration

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Solution structure of the spectrin repeat: a left-handed antiparallel triple-helical coiled-coil

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Free energy reconstruction from nonequilibrium single-molecule pulling experiments

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Optimal estimates of free energies from multistate nonequilibrium work data.

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Independent Movement, Dimerization and Stability of Tandem Repeats of Chicken Brain α-Spectrin

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Identifiers

10.1063/1.2764487

1 reference

Europe PubMed Central

PubMed publication ID

17 April 2018

http://europepmc.org/abstract/MED/17867784

PubMed publication ID

1 reference

Europe PubMed Central

PubMed publication ID

17 April 2018

http://europepmc.org/abstract/MED/17867784

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