(Q51982383)

English

Phylogenetic analysis of the complete genome sequence of Encephalitozoon cuniculi supports the fungal origin of microsporidia and reveals a high frequency of fast-evolving genes.

scientific article published in December 2004

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scholarly article

1 reference

Europe PubMed Central

PubMed publication ID

19 April 2018

http://europepmc.org/abstract/MED/15599510

Phylogenetic analysis of the complete genome sequence of Encephalitozoon cuniculi supports the fungal origin of microsporidia and reveals a high frequency of fast-evolving genes. (English)

1 reference

Europe PubMed Central

PubMed publication ID

19 April 2018

http://europepmc.org/abstract/MED/15599510

0 references

1 reference

based on heuristic

inferred from title

Encephalitozoon cuniculi

object named as

Encephalitozoon cuniculi

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inferred from title

whole genome sequencing

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based on heuristic

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3

object named as

Manolo Gouy

1 reference

Europe PubMed Central

PubMed publication ID

19 April 2018

http://europepmc.org/abstract/MED/15599510

author name string

Fabienne Thomarat

1

1 reference

Europe PubMed Central

PubMed publication ID

19 April 2018

http://europepmc.org/abstract/MED/15599510

Christian P Vivarès

2

1 reference

Europe PubMed Central

PubMed publication ID

19 April 2018

http://europepmc.org/abstract/MED/15599510

publication date

1 December 2004

1 reference

Europe PubMed Central

PubMed publication ID

19 April 2018

http://europepmc.org/abstract/MED/15599510

Journal of Molecular Evolution

1 reference

Europe PubMed Central

PubMed publication ID

19 April 2018

http://europepmc.org/abstract/MED/15599510

59

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Europe PubMed Central

PubMed publication ID

19 April 2018

http://europepmc.org/abstract/MED/15599510

6

1 reference

Europe PubMed Central

PubMed publication ID

19 April 2018

http://europepmc.org/abstract/MED/15599510

780-791

1 reference

Europe PubMed Central

PubMed publication ID

19 April 2018

http://europepmc.org/abstract/MED/15599510

Mitochondrial type iron-sulfur cluster assembly in the amitochondriate eukaryotes Trichomonas vaginalis and Giardia intestinalis, as indicated by the phylogeny of IscS.

1 reference

https://api.crossref.org/works/10.1007%2FS00239-004-2673-0

21 January 2018

Microsporidian life cycles and diversity: the relationship between virulence and transmission.

1 reference

https://pubmed.ncbi.nlm.nih.gov/15599510

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Maturation of cellular Fe-S proteins: an essential function of mitochondria

1 reference

https://pubmed.ncbi.nlm.nih.gov/15599510

12 December 2020

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inferred from PubMed ID database lookup

Long-branch attraction and the rDNA model of early eukaryotic evolution

1 reference

https://pubmed.ncbi.nlm.nih.gov/15599510

12 December 2020

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Microsporidian Encephalitozoon cuniculi, a unicellular eukaryote with an unusual chromosomal dispersion of ribosomal genes and a LSU rRNA reduced to the universal core.

1 reference

https://pubmed.ncbi.nlm.nih.gov/15599510

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

A common evolutionary origin for mitochondria and hydrogenosomes

1 reference

https://pubmed.ncbi.nlm.nih.gov/15599510

12 December 2020

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The neighbor-joining method: a new method for reconstructing phylogenetic trees

1 reference

https://pubmed.ncbi.nlm.nih.gov/15599510

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Phylogenetic analysis of the TATA box binding protein (TBP) gene from Nosema locustae: evidence for a microsporidia-fungi relationship and spliceosomal intron loss

1 reference

https://pubmed.ncbi.nlm.nih.gov/15599510

12 December 2020

based on heuristic

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First report on the systematic sequencing of the small genome of Encephalitozoon cuniculi (Protozoa, Microspora): gene organization of a 4.3 kbp region on chromosome I.

1 reference

https://pubmed.ncbi.nlm.nih.gov/15599510

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Congruent evidence from alpha-tubulin and beta-tubulin gene phylogenies for a zygomycete origin of microsporidia

1 reference

https://pubmed.ncbi.nlm.nih.gov/15599510

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Microsporidian molecular phylogeny: the fungal connection

1 reference

https://pubmed.ncbi.nlm.nih.gov/15599510

12 December 2020

based on heuristic

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A mitochondrial-like chaperonin 60 gene in Giardia lamblia: evidence that diplomonads once harbored an endosymbiont related to the progenitor of mitochondria

1 reference

https://pubmed.ncbi.nlm.nih.gov/15599510

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Presence of a mitochondrial-type 70-kDa heat shock protein in Trichomonas vaginalis suggests a very early mitochondrial endosymbiosis in eukaryotes

1 reference

https://pubmed.ncbi.nlm.nih.gov/15599510

12 December 2020

based on heuristic

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Microsporidiosis: human diseases and diagnosis

1 reference

https://pubmed.ncbi.nlm.nih.gov/15599510

12 December 2020

based on heuristic

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Ribosomal RNA sequence suggests microsporidia are extremely ancient eukaryotes

1 reference

https://pubmed.ncbi.nlm.nih.gov/15599510

12 December 2020

based on heuristic

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Root of the universal tree of life based on ancient aminoacyl-tRNA synthetase gene duplications

1 reference

https://pubmed.ncbi.nlm.nih.gov/15599510

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

The rapid generation of mutation data matrices from protein sequences

1 reference

https://pubmed.ncbi.nlm.nih.gov/15599510

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Phylogenetic analysis of beta-tubulin sequences from amitochondrial protozoa

1 reference

https://pubmed.ncbi.nlm.nih.gov/15599510

12 December 2020

based on heuristic

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BIONJ: an improved version of the NJ algorithm based on a simple model of sequence data

1 reference

https://pubmed.ncbi.nlm.nih.gov/15599510

12 December 2020

based on heuristic

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The mitosome, a novel organelle related to mitochondria in the amitochondrial parasite Entamoeba histolytica

1 reference

https://pubmed.ncbi.nlm.nih.gov/15599510

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Microsporidia, amitochondrial protists, possess a 70-kDa heat shock protein gene of mitochondrial evolutionary origin

1 reference

https://pubmed.ncbi.nlm.nih.gov/15599510

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Complete nucleotide sequences of the genes encoding translation elongation factors 1 alpha and 2 from a microsporidian parasite, Glugea plecoglossi: implications for the deepest branching of eukaryotes

1 reference

https://pubmed.ncbi.nlm.nih.gov/15599510

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Direct evidence for secondary loss of mitochondria in Entamoeba histolytica

1 reference

https://pubmed.ncbi.nlm.nih.gov/15599510

12 December 2020

based on heuristic

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Phylogenetic analyses of diplomonad genes reveal frequent lateral gene transfers affecting eukaryotes.

1 reference

https://pubmed.ncbi.nlm.nih.gov/15599510

12 December 2020

based on heuristic

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Alpha-tubulin from early-diverging eukaryotic lineages and the evolution of the tubulin family

1 reference

https://pubmed.ncbi.nlm.nih.gov/15599510

12 December 2020

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Microsporidia are related to Fungi: evidence from the largest subunit of RNA polymerase II and other proteins

1 reference

https://pubmed.ncbi.nlm.nih.gov/15599510

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Microsporidia: emerging pathogenic protists

1 reference

https://pubmed.ncbi.nlm.nih.gov/15599510

12 December 2020

based on heuristic

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Origin and evolution of the slime molds (Mycetozoa)

1 reference

https://pubmed.ncbi.nlm.nih.gov/15599510

12 December 2020

based on heuristic

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Eukaryotes with no mitochondria

1 reference

https://pubmed.ncbi.nlm.nih.gov/15599510

12 December 2020

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Small subunit ribosomal RNA+ of Hexamita inflata and the quest for the first branch in the eukaryotic tree

1 reference

https://pubmed.ncbi.nlm.nih.gov/15599510

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Microsporidia: accumulating molecular evidence that a group of amitochondriate and suspectedly primitive eukaryotes are just curious fungi

1 reference

https://pubmed.ncbi.nlm.nih.gov/15599510

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Eukaryotic ribosomes that lack a 5.8S RNA

1 reference

https://pubmed.ncbi.nlm.nih.gov/15599510

12 December 2020

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The robustness of two phylogenetic methods: four-taxon simulations reveal a slight superiority of maximum likelihood over neighbor joining

1 reference

https://pubmed.ncbi.nlm.nih.gov/15599510

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Protein phylogeny of translation elongation factor EF-1 alpha suggests microsporidians are extremely ancient eukaryotes

1 reference

https://pubmed.ncbi.nlm.nih.gov/15599510

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

A mitochondrial Hsp70 orthologue in Vairimorpha necatrix: molecular evidence that microsporidia once contained mitochondria

1 reference

https://pubmed.ncbi.nlm.nih.gov/15599510

12 December 2020

based on heuristic

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Evidence that eukaryotic triosephosphate isomerase is of alpha-proteobacterial origin

1 reference

https://pubmed.ncbi.nlm.nih.gov/15599510

12 December 2020

based on heuristic

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A simulation comparison of phylogeny algorithms under equal and unequal evolutionary rates

1 reference

https://pubmed.ncbi.nlm.nih.gov/15599510

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

A possible mitochondrial gene in the early-branching amitochondriate protist Trichomonas vaginalis

1 reference

https://pubmed.ncbi.nlm.nih.gov/15599510

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Characterization of the mRNA capping apparatus of the microsporidian parasite Encephalitozoon cuniculi

1 reference

https://pubmed.ncbi.nlm.nih.gov/15599510

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Hsp60 is targeted to a cryptic mitochondrion-derived organelle ("crypton") in the microaerophilic protozoan parasite Entamoeba histolytica

1 reference

https://pubmed.ncbi.nlm.nih.gov/15599510

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Genome sequence and gene compaction of the eukaryote parasite Encephalitozoon cuniculi

1 reference

https://pubmed.ncbi.nlm.nih.gov/15599510

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Unusually high evolutionary rate of the elongation factor 1 alpha genes from the Ciliophora and its impact on the phylogeny of eukaryotes

1 reference

https://pubmed.ncbi.nlm.nih.gov/15599510

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Alpha and beta subunits of pyruvate dehydrogenase E1 from the microsporidian Nosema locustae: mitochondrion-derived carbon metabolism in microsporidia

1 reference

https://pubmed.ncbi.nlm.nih.gov/15599510

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Generation time and genomic evolution in primates

1 reference

https://pubmed.ncbi.nlm.nih.gov/15599510

12 December 2020

based on heuristic

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A mitochondrial remnant in the microsporidian Trachipleistophora hominis

1 reference

https://pubmed.ncbi.nlm.nih.gov/15599510

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

History assignment: when was the mitochondrion founded?

1 reference

https://pubmed.ncbi.nlm.nih.gov/15599510

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Mitochondrial-type hsp70 genes of the amitochondriate protists, Giardia intestinalis, Entamoeba histolytica and two microsporidians

1 reference

https://pubmed.ncbi.nlm.nih.gov/15599510

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Secondary absence of mitochondria in Giardia lamblia and Trichomonas vaginalis revealed by valyl-tRNA synthetase phylogeny

1 reference

https://pubmed.ncbi.nlm.nih.gov/15599510

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Should we use model-based methods for phylogenetic inference when we know that assumptions about among-site rate variation and nucleotide substitution pattern are violated?

1 reference

https://pubmed.ncbi.nlm.nih.gov/15599510

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Evidence for loss of mitochondria in Microsporidia from a mitochondrial-type HSP70 in Nosema locustae.

1 reference

https://pubmed.ncbi.nlm.nih.gov/15599510

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Mitochondrial remnant organelles of Giardia function in iron-sulphur protein maturation

1 reference

https://pubmed.ncbi.nlm.nih.gov/15599510

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

CLUSTAL W: improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice

1 reference

https://pubmed.ncbi.nlm.nih.gov/15599510

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Gapped BLAST and PSI-BLAST: a new generation of protein database search programs

1 reference

https://pubmed.ncbi.nlm.nih.gov/15599510

12 December 2020

based on heuristic

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HOBACGEN: database system for comparative genomics in bacteria

1 reference

https://pubmed.ncbi.nlm.nih.gov/15599510

12 December 2020

based on heuristic

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SEAVIEW and PHYLO_WIN: two graphic tools for sequence alignment and molecular phylogeny

1 reference

https://pubmed.ncbi.nlm.nih.gov/15599510

12 December 2020

based on heuristic

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Identifiers

10.1007/S00239-004-2673-0

1 reference

Europe PubMed Central

PubMed publication ID

19 April 2018

http://europepmc.org/abstract/MED/15599510

PubMed publication ID

1 reference

Europe PubMed Central

PubMed publication ID

19 April 2018

http://europepmc.org/abstract/MED/15599510

ResearchGate publication ID

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