(Q52310657)

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Global optimum protein threading with gapped alignment and empirical pair score functions.

scientific article published in February 1996

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scholarly article

1 reference

Europe PubMed Central

29 April 2018

http://europepmc.org/abstract/MED/8568903

Global optimum protein threading with gapped alignment and empirical pair score functions. (English)

1 reference

Europe PubMed Central

29 April 2018

http://europepmc.org/abstract/MED/8568903

author name string

Lathrop RH

1

1 reference

Europe PubMed Central

29 April 2018

http://europepmc.org/abstract/MED/8568903

Smith TF

2

1 reference

Europe PubMed Central

29 April 2018

http://europepmc.org/abstract/MED/8568903

language of work or name

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publication date

1 February 1996

1 reference

Europe PubMed Central

29 April 2018

http://europepmc.org/abstract/MED/8568903

number of pages

25

1 reference

based on heuristic

inferred from page(s)

Journal of Molecular Biology

1 reference

Europe PubMed Central

29 April 2018

http://europepmc.org/abstract/MED/8568903

255

1 reference

Europe PubMed Central

29 April 2018

http://europepmc.org/abstract/MED/8568903

641-665

1 reference

Europe PubMed Central

29 April 2018

http://europepmc.org/abstract/MED/8568903

4

1 reference

Europe PubMed Central

29 April 2018

http://europepmc.org/abstract/MED/8568903

Dictionary of protein secondary structure: pattern recognition of hydrogen-bonded and geometrical features

1 reference

https://www.researchgate.net/publication/14631430_Global_Optimum_Protein_Threading_with_Gapped_Alignment_and_Empirical_Pair_Score_Functions#references

(PDF) Global Optimum Protein Threading with Gapped Alignment and Empirical Pair Score Functions (English)

Contact potential that recognizes the correct folding of globular proteins

1 reference

https://www.researchgate.net/publication/14631430_Global_Optimum_Protein_Threading_with_Gapped_Alignment_and_Empirical_Pair_Score_Functions#references

(PDF) Global Optimum Protein Threading with Gapped Alignment and Empirical Pair Score Functions (English)

Detection of native-like models for amino acid sequences of unknown three-dimensional structure in a data base of known protein conformations

1 reference

https://www.researchgate.net/publication/14631430_Global_Optimum_Protein_Threading_with_Gapped_Alignment_and_Empirical_Pair_Score_Functions#references

(PDF) Global Optimum Protein Threading with Gapped Alignment and Empirical Pair Score Functions (English)

A Method to Identify Protein Sequences That Fold into a Known Three-Dimensional Structure

1 reference

https://www.researchgate.net/publication/14631430_Global_Optimum_Protein_Threading_with_Gapped_Alignment_and_Empirical_Pair_Score_Functions#references

(PDF) Global Optimum Protein Threading with Gapped Alignment and Empirical Pair Score Functions (English)

Database of homology-derived protein structures and the structural meaning of sequence alignment

1 reference

https://www.researchgate.net/publication/14631430_Global_Optimum_Protein_Threading_with_Gapped_Alignment_and_Empirical_Pair_Score_Functions#references

(PDF) Global Optimum Protein Threading with Gapped Alignment and Empirical Pair Score Functions (English)

A search for the most stable folds of protein chains

1 reference

https://www.researchgate.net/publication/14631430_Global_Optimum_Protein_Threading_with_Gapped_Alignment_and_Empirical_Pair_Score_Functions#references

(PDF) Global Optimum Protein Threading with Gapped Alignment and Empirical Pair Score Functions (English)

Calculation of conformational ensembles from potentials of mean force. An approach to the knowledge-based prediction of local structures in globular proteins.

1 reference

https://www.researchgate.net/publication/14631430_Global_Optimum_Protein_Threading_with_Gapped_Alignment_and_Empirical_Pair_Score_Functions#references

(PDF) Global Optimum Protein Threading with Gapped Alignment and Empirical Pair Score Functions (English)

The combinatorial distance geometry method for the calculation of molecular conformation. I. A new approach to an old problem.

1 reference

https://www.researchgate.net/publication/14631430_Global_Optimum_Protein_Threading_with_Gapped_Alignment_and_Empirical_Pair_Score_Functions#references

(PDF) Global Optimum Protein Threading with Gapped Alignment and Empirical Pair Score Functions (English)

Refinement of the structure of human basic fibroblast growth factor at 1.6 A resolution and analysis of presumed heparin binding sites by selenate substitution

1 reference

https://www.researchgate.net/publication/14631430_Global_Optimum_Protein_Threading_with_Gapped_Alignment_and_Empirical_Pair_Score_Functions#references

(PDF) Global Optimum Protein Threading with Gapped Alignment and Empirical Pair Score Functions (English)

Protein structural similarities predicted by a sequence-structure compatibility method

1 reference

https://www.researchgate.net/publication/14631430_Global_Optimum_Protein_Threading_with_Gapped_Alignment_and_Empirical_Pair_Score_Functions#references

(PDF) Global Optimum Protein Threading with Gapped Alignment and Empirical Pair Score Functions (English)

The protein threading problem with sequence amino acid interaction preferences is NP-complete

1 reference

https://www.researchgate.net/publication/14631430_Global_Optimum_Protein_Threading_with_Gapped_Alignment_and_Empirical_Pair_Score_Functions#references

(PDF) Global Optimum Protein Threading with Gapped Alignment and Empirical Pair Score Functions (English)

Learning about protein folding via potential functions

1 reference

https://www.researchgate.net/publication/14631430_Global_Optimum_Protein_Threading_with_Gapped_Alignment_and_Empirical_Pair_Score_Functions#references

(PDF) Global Optimum Protein Threading with Gapped Alignment and Empirical Pair Score Functions (English)

Conservation and prediction of solvent accessibility in protein families

1 reference

https://www.researchgate.net/publication/14631430_Global_Optimum_Protein_Threading_with_Gapped_Alignment_and_Empirical_Pair_Score_Functions#references

(PDF) Global Optimum Protein Threading with Gapped Alignment and Empirical Pair Score Functions (English)

Protein superfamilies and domain superfolds

1 reference

https://www.researchgate.net/publication/14631430_Global_Optimum_Protein_Threading_with_Gapped_Alignment_and_Empirical_Pair_Score_Functions#references

(PDF) Global Optimum Protein Threading with Gapped Alignment and Empirical Pair Score Functions (English)

Boltzmann's principle, knowledge-based mean fields and protein folding. An approach to the computational determination of protein structures

1 reference

https://www.researchgate.net/publication/14631430_Global_Optimum_Protein_Threading_with_Gapped_Alignment_and_Empirical_Pair_Score_Functions#references

(PDF) Global Optimum Protein Threading with Gapped Alignment and Empirical Pair Score Functions (English)

Three-dimensional profiles from residue-pair preferences: identification of sequences with beta/alpha-barrel fold

1 reference

https://www.researchgate.net/publication/14631430_Global_Optimum_Protein_Threading_with_Gapped_Alignment_and_Empirical_Pair_Score_Functions#references

(PDF) Global Optimum Protein Threading with Gapped Alignment and Empirical Pair Score Functions (English)

An empirical energy function for threading protein sequence through the folding motif

1 reference

https://www.researchgate.net/publication/14631430_Global_Optimum_Protein_Threading_with_Gapped_Alignment_and_Empirical_Pair_Score_Functions#references

(PDF) Global Optimum Protein Threading with Gapped Alignment and Empirical Pair Score Functions (English)

Identifiers

10.1006/JMBI.1996.0053

1 reference

Europe PubMed Central

29 April 2018

http://europepmc.org/abstract/MED/8568903

1 reference

Europe PubMed Central

29 April 2018

http://europepmc.org/abstract/MED/8568903

ResearchGate publication ID

0 references

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