(Q52657167)

English

Genomic and Genotypic Characterization of Cylindrospermopsis raciborskii: Toward an Intraspecific Phylogenetic Evaluation by Comparative Genomics.

scientific article published on 26 February 2018

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scholarly article

1 reference

Europe PubMed Central

5 May 2018

http://europepmc.org/abstract/PMC/5834425

Genomic and Genotypic Characterization of Cylindrospermopsis raciborskii: Toward an Intraspecific Phylogenetic Evaluation by Comparative Genomics. (English)

1 reference

Europe PubMed Central

5 May 2018

http://europepmc.org/abstract/PMC/5834425

1 reference

based on heuristic

inferred from title

Cylindrospermopsis raciborskii

1 reference

based on heuristic

inferred from title

corrigendum / erratum

Corrigendum: Genomic and Genotypic Characterization of Cylindrospermopsis raciborskii: Toward an Intraspecific Phylogenetic Evaluation by Comparative Genomics.

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2

1 reference

Europe PubMed Central

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:29535689%20AND%20SRC:MED&resulttype=core&format=json

7 June 2020

Danillo Oliveira Alvarenga

3

1 reference

Europe PubMed Central

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7 June 2020

Marli Fátima Fiore

7

1 reference

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7 June 2020

Alessandro Varani

6

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Alessandro M Varani

2 references

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7 June 2020

https://orcid.org/0000-0002-8876-3269

Vinícius Viana Abreu Montanaro

1

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Vinicius A C Abreu

1 reference

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7 June 2020

Patricia D C Schaker

4

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Patricia D C Schaker

1 reference

Europe PubMed Central

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7 June 2020

Caroline Hoff-Risseti

5

object named as

Caroline Hoff-Risseti

1 reference

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7 June 2020

publication date

26 February 2018

1 reference

Europe PubMed Central

5 May 2018

http://europepmc.org/abstract/PMC/5834425

Frontiers in Microbiology

1 reference

Europe PubMed Central

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7 June 2020

9

1 reference

Europe PubMed Central

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7 June 2020

306

1 reference

Europe PubMed Central

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7 June 2020

copyright license

Creative Commons Attribution 4.0 International

26 February 2018

1 reference

April 2022 Public Data File from Crossref

copyright status

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maintained by WikiProject

WikiProject Ecology

1 reference

based on heuristic

inferred from title

Distribution of invasive Cylindrospermopsis raciborskii in the East-Central Europe is driven by climatic and local environmental variables.

1 reference

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1 reference

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A Comprehensive Study of Cyanobacterial Morphological and Ecological Evolutionary Dynamics through Deep Geologic Time

1 reference

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22 May 2018

Corrected Genome Annotations Reveal Gene Loss and Antibiotic Resistance as Drivers in the Fitness Evolution of Salmonella enterica Serovar Typhimurium

1 reference

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22 May 2018

The bacterial pangenome as a new tool for analysing pathogenic bacteria

1 reference

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22 May 2018

Cylindrospermopsis raciborskii: review of the distribution, phylogeography, and ecophysiology of a global invasive species

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5834425

22 May 2018

OrthoVenn: a web server for genome wide comparison and annotation of orthologous clusters across multiple species

1 reference

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22 May 2018

antiSMASH 3.0-a comprehensive resource for the genome mining of biosynthetic gene clusters

1 reference

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22 May 2018

Phylum-wide comparative genomics unravel the diversity of secondary metabolism in Cyanobacteria.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5834425

22 May 2018

Phylogeny and biogeography of the invasive cyanobacterium Cylindrospermopsis raciborskii

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5834425

22 May 2018

Hassallidins, antifungal glycolipopeptides, are widespread among cyanobacteria and are the end-product of a nonribosomal pathway

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5834425

22 May 2018

Annotation enrichment analysis: an alternative method for evaluating the functional properties of gene sets

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5834425

22 May 2018

Comparative genomics of Cylindrospermopsis raciborskii strains with differential toxicities

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5834425

22 May 2018

RAxML version 8: a tool for phylogenetic analysis and post-analysis of large phylogenies

1 reference

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22 May 2018

The SEED and the Rapid Annotation of microbial genomes using Subsystems Technology (RAST).

1 reference

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22 May 2018

Phylogeny and biogeography of cyanobacteria and their produced toxins.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5834425

22 May 2018

GET_HOMOLOGUES, a versatile software package for scalable and robust microbial pangenome analysis

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5834425

22 May 2018

Cylindrospermopsin and saxitoxin synthetase genes in Cylindrospermopsis raciborskii strains from Brazilian freshwater

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5834425

22 May 2018

Assemblathon 2: evaluating de novo methods of genome assembly in three vertebrate species

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5834425

22 May 2018

Bacterial protein N-glycosylation: new perspectives and applications

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5834425

22 May 2018

Improving the coverage of the cyanobacterial phylum using diversity-driven genome sequencing

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5834425

22 May 2018

Geneious Basic: an integrated and extendable desktop software platform for the organization and analysis of sequence data

1 reference

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22 May 2018

SPAdes: a new genome assembly algorithm and its applications to single-cell sequencing

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5834425

22 May 2018

Invasion of Nostocales (cyanobacteria) to Subtropical and Temperate Freshwater Lakes - Physiological, Regional, and Global Driving Forces

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5834425

22 May 2018

Increased incidence of Cylindrospermopsis raciborskii in temperate zones--is climate change responsible?

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5834425

22 May 2018

What drives the distribution of the bloom-forming cyanobacteria Planktothrix agardhii and Cylindrospermopsis raciborskii?

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5834425

22 May 2018

Using OrthoMCL to assign proteins to OrthoMCL-DB groups or to cluster proteomes into new ortholog groups

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5834425

22 May 2018

Gene set analysis of genome-wide association studies: methodological issues and perspectives

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5834425

22 May 2018

Quality control and preprocessing of metagenomic datasets

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5834425

22 May 2018

Interactive microbial genome visualization with GView

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22 May 2018

The smallest known genomes of multicellular and toxic cyanobacteria: comparison, minimal gene sets for linked traits and the evolutionary implications

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5834425

22 May 2018

Morphology, genetic diversity, temperature tolerance and toxicity of Cylindrospermopsis raciborskii (Nostocales, Cyanobacteria) strains from Thailand and Japan.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5834425

22 May 2018

A simple, fast, and accurate method of phylogenomic inference

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5834425

22 May 2018

Biosynthetic intermediate analysis and functional homology reveal a saxitoxin gene cluster in cyanobacteria

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5834425

22 May 2018

The RAST Server: rapid annotations using subsystems technology

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5834425

22 May 2018

Characterization of the gene cluster responsible for cylindrospermopsin biosynthesis.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5834425

22 May 2018

Climate change affects timing and size of populations of an invasive cyanobacterium in temperate regions

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5834425

22 May 2018

Cyanobacterial peptides - nature's own combinatorial biosynthesis

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5834425

22 May 2018

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1 reference

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22 May 2018

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1 reference

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Blast2GO: a universal tool for annotation, visualization and analysis in functional genomics research

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22 May 2018

Genetic diversity of Cylindrospermopsis strains (cyanobacteria) isolated from four continents.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5834425

22 May 2018

MUSCLE: multiple sequence alignment with high accuracy and high throughput

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22 May 2018

MrBayes 3: Bayesian phylogenetic inference under mixed models

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5834425

22 May 2018

Phylogeography of the invasive cyanobacterium Cylindrospermopsis raciborskii

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5834425

22 May 2018

Environmental context of Cylindrospermopsis raciborskii (Cyanobacteria) blooms in a shallow pond in France.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5834425

22 May 2018

Polyketide biosynthesis: a millennium review

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22 May 2018

Artemis: sequence visualization and annotation

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22 May 2018

Micronucleus induction and chromosome loss in transformed human white cells indicate clastogenic and aneugenic action of the cyanobacterial toxin, cylindrospermopsin

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5834425

22 May 2018

The first evidence of paralytic shellfish toxins in the fresh water cyanobacterium Cylindrospermopsis raciborskii, isolated from Brazil.

1 reference

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22 May 2018

Basic local alignment search tool

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22 May 2018

Rearranged Biosynthetic Gene Cluster and Synthesis of Hassallidin E in Planktothrix serta PCC 8927.

1 reference

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13 August 2018

Toxicity phenotype does not correlate with phylogeny of Cylindrospermopsis raciborskii strains.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5834425

13 August 2018

Hassallidin B--second antifungal member of the Hassallidin family.

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13 August 2018

On the way to cyanobacterial blooms: impact of the herbicide metribuzin on the competition between a green alga (Scenedesmus) and a cyanobacterium (Microcystis).

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13 August 2018

Hassallidin A, a glycosylated lipopeptide with antifungal activity from the cyanobacterium Hassallia sp.

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13 August 2018

Phenotypical variation in a toxic strain of the phytoplankter, Cylindrospermopsis raciborskii (Nostocales, Cyanophyceae) during batch culture

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5834425

13 August 2018

The effect of temperature on growth and production of paralytic shellfish poisoning toxins by the cyanobacterium Cylindrospermopsis raciborskii C10

1 reference

https://pubmed.ncbi.nlm.nih.gov/29535689

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Molecular separation of two long taxonomically debated cyanobacterial genera Cylindrospermopsis and Raphidiopsis (Nostocales) based on the ITS-L phylogeny

1 reference

https://pubmed.ncbi.nlm.nih.gov/29535689

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Identifiers

10.3389/FMICB.2018.00306

1 reference

Europe PubMed Central

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:29535689%20AND%20SRC:MED&resulttype=core&format=json

7 June 2020

1 reference

Europe PubMed Central

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:29535689%20AND%20SRC:MED&resulttype=core&format=json

7 June 2020

1 reference

Europe PubMed Central

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:29535689%20AND%20SRC:MED&resulttype=core&format=json

7 June 2020

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