(Q52781334)

7 May 2018

title

On the unfounded enthusiasm for soft selective sweeps. (English)

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7 May 2018

author

Jeffrey D. Jensen

series ordinal

1

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7 May 2018

language of work or name

English

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publication date

27 October 2014

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7 May 2018

published in

Nature Communications

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7 May 2018

volume

5

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7 May 2018

page(s)

5281

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7 May 2018

Molecular signatures of natural selection

cites work

1 reference

https://api.crossref.org/works/10.1038%2FNCOMMS6281

Recent progress in polymorphism-based population genetic inference

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNCOMMS6281

The hitchhiking effect on linkage disequilibrium between linked neutral loci

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNCOMMS6281

On the utility of linkage disequilibrium as a statistic for identifying targets of positive selection in nonequilibrium populations

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNCOMMS6281

The genetics of human adaptation: hard sweeps, soft sweeps, and polygenic adaptation

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNCOMMS6281

Classic selective sweeps were rare in recent human evolution

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNCOMMS6281

Population genomics of rapid adaptation by soft selective sweeps.

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNCOMMS6281

Soft sweeps: molecular population genetics of adaptation from standing genetic variation

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNCOMMS6281

Widespread parallel evolution in sticklebacks by repeated fixation of Ectodysplasin alleles

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNCOMMS6281

Understanding and using quantitative genetic variation

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNCOMMS6281

Distribution of fitness effects among beneficial mutations before selection in experimental populations of bacteria

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNCOMMS6281

Shifting fitness landscapes in response to altered environments.

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNCOMMS6281

Influenza virus drug resistance: a time-sampled population genetics perspective

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNCOMMS6281

Amino acid changes in hemagglutinin contribute to the replication of oseltamivir-resistant H1N1 influenza viruses

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNCOMMS6281

Evolution of the influenza A virus genome during development of oseltamivir resistance in vitro

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNCOMMS6281

On the origin and spread of an adaptive allele in deer mice

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNCOMMS6281

Adaptive evolution of multiple traits through multiple mutations at a single gene

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNCOMMS6281

Reciprocal transplants demonstrate strong adaptive differentiation of the model organism Arabidopsis thaliana in its native range.

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNCOMMS6281

Evidence that adaptation in Drosophila is not limited by mutation at single sites

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNCOMMS6281

The genetic theory of adaptation: a brief history

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNCOMMS6281

Slightly Deleterious Mutant Substitutions in Evolution

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNCOMMS6281

The molecular clock may be an episodic clock

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNCOMMS6281

The distribution of fitness effects of new mutations

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNCOMMS6281

The distribution of fitness effects caused by single-nucleotide substitutions in an RNA virus

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNCOMMS6281

Beneficial fitness effects are not exponential for two viruses.

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNCOMMS6281

The distribution of fitness effects of beneficial mutations in Pseudomonas aeruginosa

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNCOMMS6281

The properties of adaptive walks in evolving populations of fungus

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNCOMMS6281

The H274Y mutation in the influenza A/H1N1 neuraminidase active site following oseltamivir phosphate treatment leave virus severely compromised both in vitro and in vivo.

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNCOMMS6281

Experimental illumination of a fitness landscape

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNCOMMS6281

A bayesian MCMC approach to assess the complete distribution of fitness effects of new mutations: uncovering the potential for adaptive walks in challenging environments

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNCOMMS6281

Loss and recovery of genetic diversity in adapting populations of HIV

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNCOMMS6281

Fundamental concepts in genetics: Effective population size and patterns of molecular evolution and variation

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNCOMMS6281

Genomics of adaptation during experimental evolution of the opportunistic pathogen Pseudomonas aeruginosa

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNCOMMS6281

Parallel molecular evolution in an herbivore community

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNCOMMS6281

The genetic basis of adaptive melanism in pocket mice

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNCOMMS6281

Adaptive variation in beach mice produced by two interacting pigmentation genes

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNCOMMS6281

Nuclear gene indicates coat-color polymorphism in mammoths

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNCOMMS6281

Molecular and functional basis of phenotypic convergence in white lizards at White Sands

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNCOMMS6281

Convergence in pigmentation at multiple levels: mutations, genes and function

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNCOMMS6281

Effects of linkage on rates of molecular evolution

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNCOMMS6281

The Hill-Robertson effect: evolutionary consequences of weak selection and linkage in finite populations

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNCOMMS6281

The fixation probability of two competing beneficial mutations.

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNCOMMS6281

Synchronous waves of failed soft sweeps in the laboratory: remarkably rampant clonal interference of alleles at a single locus

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNCOMMS6281

Population genetics of malaria resistance in humans

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNCOMMS6281

Genomic insights into positive selection

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNCOMMS6281

Global landscape of recent inferred Darwinian selection for Homo sapiens

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNCOMMS6281

A haplotype map of the human genome

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNCOMMS6281

A map of recent positive selection in the human genome

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNCOMMS6281

Genomic regions exhibiting positive selection identified from dense genotype data

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNCOMMS6281

Genomic scans for selective sweeps using SNP data

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNCOMMS6281

Natural selection on protein-coding genes in the human genome

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNCOMMS6281

Genomewide spatial correspondence between nonsynonymous divergence and neutral polymorphism reveals extensive adaptation in Drosophila

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNCOMMS6281

Inferring the demographic history and rate of adaptive substitution in Drosophila

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNCOMMS6281

An approximate bayesian estimator suggests strong, recurrent selective sweeps in Drosophila

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNCOMMS6281

Hitchhiking effects of recurrent beneficial amino acid substitutions in the Drosophila melanogaster genome

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNCOMMS6281

Distinguishing between selective sweeps and demography using DNA polymorphism data

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNCOMMS6281

How reliable are empirical genomic scans for selective sweeps?

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNCOMMS6281

Controlling the false-positive rate in multilocus genome scans for selection

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNCOMMS6281

SweeD: likelihood-based detection of selective sweeps in thousands of genomes

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNCOMMS6281

The impact of equilibrium assumptions on tests of selection

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNCOMMS6281

OmegaPlus: a scalable tool for rapid detection of selective sweeps in whole-genome datasets

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNCOMMS6281

Genomic data reveal a complex making of humans

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNCOMMS6281

Hitchhiking effect of a beneficial mutation spreading in a subdivided population

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNCOMMS6281

Parallel adaptation: one or many waves of advance of an advantageous allele?

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNCOMMS6281

Adaptation – not by sweeps alone

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNCOMMS6281

Pattern of polymorphism after strong artificial selection in a domestication event

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNCOMMS6281

The cost of natural selection

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNCOMMS6281

Soft sweeps II--molecular population genetics of adaptation from recurrent mutation or migration

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNCOMMS6281

Soft sweeps III: the signature of positive selection from recurrent mutation

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNCOMMS6281

A Mathematical Theory of Natural and Artificial Selection, Part V: Selection and Mutation

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNCOMMS6281

The structure of linkage disequilibrium around a selective sweep

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNCOMMS6281

7 January 2021

The signature of positive selection on standing genetic variation

1 reference

https://api.crossref.org/works/10.1038%2FNCOMMS6281

7 January 2021

The fitness costs of antibiotic resistance mutations

1 reference

https://api.crossref.org/works/10.1038%2FNCOMMS6281

7 January 2021

The genetical theory of natural selection

1 reference

https://api.crossref.org/works/10.1038%2FNCOMMS6281

7 January 2021

THE POPULATION GENETICS OF ADAPTATION: THE DISTRIBUTION OF FACTORS FIXED DURING ADAPTIVE EVOLUTION.

1 reference

https://api.crossref.org/works/10.1038%2FNCOMMS6281

7 January 2021

Identifiers

DOI

10.1038/NCOMMS6281

1 reference

7 May 2018

ADS bibcode

2014NatCo...5.5281J

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1 reference

7 May 2018