(Q53013326)

10 May 2018

title

Pattern and rate of indel evolution inferred from whole chloroplast intergenic regions in sugarcane, maize and rice. (English)

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10 May 2018

author name string

Kyoko Yamane

series ordinal

1

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10 May 2018

Kentaro Yano

series ordinal

2

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10 May 2018

Taihachi Kawahara

series ordinal

3

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10 May 2018

publication date

1 October 2006

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10 May 2018

published in

DNA Research

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10 May 2018

volume

13

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10 May 2018

issue

5

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10 May 2018

page(s)

197-204

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10 May 2018

Majority of divergence between closely related DNA samples is due to indels

cites work

1 reference

https://api.crossref.org/works/10.1093%2FDNARES%2FDSL012

The Evolution of Non-Coding Chloroplast DNA and Its Application in Plant Systematics

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FDNARES%2FDSL012

Molecular evolution of insertions and deletion in the chloroplast genome of silene

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FDNARES%2FDSL012

Patterns and relative rates of nucleotide and insertion/deletion evolution at six chloroplast intergenic regions in new world species of the Lecythidaceae

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FDNARES%2FDSL012

The complete sequence of the rice (Oryza sativa) chloroplast genome: intermolecular recombination between distinct tRNA genes accounts for a major plastid DNA inversion during the evolution of the cereals

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FDNARES%2FDSL012

Complete sequence of the maize chloroplast genome: gene content, hotspots of divergence and fine tuning of genetic information by transcript editing

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FDNARES%2FDSL012

Structural features of a wheat plastome as revealed by complete sequencing of chloroplast DNA.

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FDNARES%2FDSL012

Whole chloroplast genome comparison of rice, maize, and wheat: implications for chloroplast gene diversification and phylogeny of cereals

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FDNARES%2FDSL012

Complete nucleotide sequence of the sugarcane (Saccharum officinarum) chloroplast genome: a comparative analysis of four monocot chloroplast genomes

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FDNARES%2FDSL012

Phylogenetics of Miscanthus , Saccharum and related genera (Saccharinae, Andropogoneae, Poaceae) based on DNA sequences from ITS nuclear ribosomal DNA and plastid trnL intron and trnL-F intergenic spacers

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FDNARES%2FDSL012

A comparison of rice chloroplast genomes

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FDNARES%2FDSL012

Uniparental inheritance of mitochondrial and chloroplast genes: mechanisms and evolution

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FDNARES%2FDSL012

CLUSTAL W: improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FDNARES%2FDSL012

21 January 2018

The chloroplast genome

1 reference

https://api.crossref.org/works/10.1093%2FDNARES%2FDSL012

Regulation of gene expression in chloroplasts of higher plants

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FDNARES%2FDSL012

DnaSP version 3: an integrated program for molecular population genetics and molecular evolution analysis

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FDNARES%2FDSL012

The size distribution of insertions and deletions in human and rodent pseudogenes suggests the logarithmic gap penalty for sequence alignment

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FDNARES%2FDSL012

Deletions in processed pseudogenes accumulate faster in rodents than in humans

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FDNARES%2FDSL012

Evolution of a noncoding region of the chloroplast genome

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FDNARES%2FDSL012

The complete nucleotide sequence of wild rice (Oryza nivara) chloroplast genome: first genome wide comparative sequence analysis of wild and cultivated rice

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FDNARES%2FDSL012

Neighboring base composition and transversion/transition bias in a comparison of rice and maize chloroplast noncoding regions

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FDNARES%2FDSL012

Homopolymer tract length dependent enrichments in functional regions of 27 eukaryotes and their novel dependence on the organism DNA (G+C)% composition

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FDNARES%2FDSL012

Chloroplast gene sequences and the study of plant evolution

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FDNARES%2FDSL012

Very close relationship of the chloroplast genomes among Saccharum species

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FDNARES%2FDSL012

Rapid recent growth and divergence of rice nuclear genomes

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FDNARES%2FDSL012

Comparative organization of chloroplast genomes

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FDNARES%2FDSL012

Rates of nucleotide substitution vary greatly among plant mitochondrial, chloroplast, and nuclear DNAs

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FDNARES%2FDSL012

Nucleotide Substitution Rates in Legume Chloroplast DNA Depend on the Presence of the Inverted Repeat

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FDNARES%2FDSL012

21 January 2018

Identifiers

DOI

10.1093/DNARES/DSL012

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10 May 2018

1 reference

10 May 2018