(Q53027596)

10 May 2018

title

Effects of hydrophobic and dipole-dipole interactions on the conformational transitions of a model polypeptide. (English)

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10 May 2018

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Yan Mu

1

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10 May 2018

Yi Qin Gao

series ordinal

2

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10 May 2018

language of work or name

English

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publication date

1 September 2007

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10 May 2018

Journal of Chemical Physics

published in

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volume

127

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10 May 2018

issue

10

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10 May 2018

page(s)

105102

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10 May 2018

Review: history of the amyloid fibril

cites work

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Towards an understanding of amyloidogenesis

21 January 2018

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Common core structure of amyloid fibrils by synchrotron X-ray diffraction.

21 January 2018

1 reference

Structure of the cross-beta spine of amyloid-like fibrils

21 January 2018

1 reference

A de novo designed helix-turn-helix peptide forms nontoxic amyloid fibrils

21 January 2018

1 reference

Conformational transitions in peptides containing two putative alpha-helices of the prion protein.

21 January 2018

1 reference

Mechanism for the alpha-helix to beta-hairpin transition

21 January 2018

1 reference

Solvent effects on the conformational transition of a model polyalanine peptide

21 January 2018

1 reference

Role of hydrophobic clusters in the stability of alpha-helical coiled coils and their conversion to amyloid-like beta-sheets

21 January 2018

1 reference

Three-helix-bundle protein in a Ramachandran model

21 January 2018

1 reference

Two state behavior in a solvable model of beta-hairpin folding.

21 January 2018

1 reference

Role of topology, nonadditivity, and water-mediated interactions in predicting the structures of alpha/beta proteins.

21 January 2018

1 reference

Effective potentials for folding proteins.

21 January 2018

1 reference

Global optimization by energy landscape paving.

21 January 2018

1 reference

Accelerated molecular dynamics: a promising and efficient simulation method for biomolecules

21 January 2018

1 reference

Relating kinetic rates and local energetic roughness by accelerated molecular-dynamics simulations.

21 January 2018

1 reference

Phosphorylation effects on cis/trans isomerization and the backbone conformation of serine-proline motifs: accelerated molecular dynamics analysis

21 January 2018

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Application of the accelerated molecular dynamics simulations to the folding of a small protein

21 January 2018

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alpha-helix formation: discontinuous molecular dynamics on an intermediate-resolution protein model

21 January 2018

1 reference

Assembly of a tetrameric alpha-helical bundle: computer simulations on an intermediate-resolution protein model

21 January 2018

1 reference

Efficient Monte Carlo trial moves for polypeptide simulations.

21 January 2018

1 reference

Molecular dynamics simulations of spontaneous fibril formation by random-coil peptides

21 January 2018

1 reference

Simple off-lattice model to study the folding and aggregation of peptides

21 January 2018

1 reference

21 January 2018

Identifiers

DOI

10.1063/1.2768062

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10 May 2018

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10 May 2018