(Q53382210)

13 May 2018

title

Transmembrane helix assembly by window exchange umbrella sampling. (English)

1 reference

13 May 2018

main subject

transmembrane protein

0 references

3

Wonpil Im

1 reference

13 May 2018

Soohyung Park

1

1 reference

13 May 2018

Taehoon Kim

series ordinal

2

1 reference

13 May 2018

language of work or name

English

0 references

publication date

8 March 2012

1 reference

13 May 2018

published in

Physical Review Letters

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13 May 2018

volume

108

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13 May 2018

page(s)

108102

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13 May 2018

issue

10

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13 May 2018

Overcoming barriers to membrane protein structure determination

cites work

1 reference

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Equilibrium sampling in biomolecular simulations

22 May 2018

1 reference

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Mapping the human membrane proteome: a majority of the human membrane proteins can be classified according to function and evolutionary origin

22 May 2018

1 reference

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Novel free energy calculations to explore mechanisms and energetics of membrane protein structure and function.

22 May 2018

1 reference

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CHARMM: the biomolecular simulation program

22 May 2018

1 reference

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Random walk in orthogonal space to achieve efficient free-energy simulation of complex systems

22 May 2018

1 reference

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MMTSB Tool Set: enhanced sampling and multiscale modeling methods for applications in structural biology.

22 May 2018

1 reference

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Efficient, Multiple-Range Random Walk Algorithm to Calculate the Density of States

22 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3657132

Helix to helix packing in proteins

22 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3657132

X-ray structure of the GCN4 leucine zipper, a two-stranded, parallel coiled coil

22 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3657132

Optimized explicit-solvent replica exchange molecular dynamics from scratch.

22 May 2018

1 reference

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Role of hydrogen bonding and helix-lipid interactions in transmembrane helix association

13 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3657132

Generalized ensemble and tempering simulations: a unified view.

13 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3657132

Insights into the recognition and association of transmembrane alpha-helices. The free energy of alpha-helix dimerization in glycophorin A.

13 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3657132

Effective energy function for proteins in lipid membranes

13 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3657132

Replica Monte Carlo simulation of spin glasses.

13 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3657132

Replica-exchange molecular dynamics method for protein folding

13 August 2018

1 reference

Crossref

https://api.crossref.org/works/10.1103%2FPHYSREVLETT.108.108102

Multidimensional replica-exchange method for free-energy calculations

21 January 2018

1 reference

Crossref

https://api.crossref.org/works/10.1103%2FPHYSREVLETT.108.108102

Implementation and application of helix-helix distance and crossing angle restraint potentials

21 January 2018

1 reference

12 December 2020

Interhelical hydrogen bonding drives strong interactions in membrane proteins

1 reference

12 December 2020

In silico screening of mutational effects on transmembrane helix dimerization: insights from rigid-body docking and molecular dynamics simulations

1 reference

12 December 2020

Transmembrane helix tilting: insights from calculating the potential of mean force

1 reference

12 December 2020

Asparagine-mediated self-association of a model transmembrane helix

1 reference

12 December 2020

10.1103/PHYSREVLETT.108.108102

Identifiers

DOI

1 reference

13 May 2018

PMCID

3657132

1 reference

13 May 2018

PubMed ID

22463457

1 reference

13 May 2018