(Q53383708)

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:19602621%20AND%20SRC:MED&resulttype=core&format=json

2 February 2020

title

Aberrant mRNA transcripts and the nonsense-mediated decay proteins UPF2 and UPF3 are enriched in the Arabidopsis nucleolus (English)

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:19602621%20AND%20SRC:MED&resulttype=core&format=json

2 February 2020

7

1 reference

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2 February 2020

author name string

Sang Hyon Kim

1

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:19602621%20AND%20SRC:MED&resulttype=core&format=json

2 February 2020

Olga A Koroleva

2

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:19602621%20AND%20SRC:MED&resulttype=core&format=json

2 February 2020

Dominika Lewandowska

3

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:19602621%20AND%20SRC:MED&resulttype=core&format=json

2 February 2020

Ali F Pendle

4

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:19602621%20AND%20SRC:MED&resulttype=core&format=json

2 February 2020

Gillian P Clark

5

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:19602621%20AND%20SRC:MED&resulttype=core&format=json

2 February 2020

Craig G Simpson

6

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:19602621%20AND%20SRC:MED&resulttype=core&format=json

2 February 2020

John W S Brown

8

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:19602621%20AND%20SRC:MED&resulttype=core&format=json

2 February 2020

publication date

14 July 2009

1 reference

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2 February 2020

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:19602621%20AND%20SRC:MED&resulttype=core&format=json

2 February 2020

volume

21

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:19602621%20AND%20SRC:MED&resulttype=core&format=json

2 February 2020

issue

7

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:19602621%20AND%20SRC:MED&resulttype=core&format=json

2 February 2020

page(s)

2045-2057

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:19602621%20AND%20SRC:MED&resulttype=core&format=json

Creative Commons Attribution 4.0 International

2 February 2020

copyright license

start time

19 January 2021

1 reference

April 2022 Public Data File from Crossref

copyright status

copyrighted

0 references

cites work

MicroRNAs with a nucleolar location

1 reference

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Genome-wide suppression of aberrant mRNA-like noncoding RNAs by NMD in Arabidopsis

25 August 2018

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Role of Cajal bodies and nucleolus in the maturation of the U1 snRNP in Arabidopsis

25 August 2018

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Reciprocal regulation of glycine-rich RNA-binding proteins via an interlocked feedback loop coupling alternative splicing to nonsense-mediated decay in Arabidopsis.

25 August 2018

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25 August 2018

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Nuclear transit of the RNA-binding protein She2 is required for translational control of localized ASH1 mRNA.

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The meaning of nonsense

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Inter-kingdom conservation of mechanism of nonsense-mediated mRNA decay

25 August 2018

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A decade of surprises for tRNA nuclear-cytoplasmic dynamics

25 August 2018

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Messenger RNA regulation: to translate or to degrade

25 August 2018

1 reference

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Auto-regulation of the circadian slave oscillator component AtGRP7 and regulation of its targets is impaired by a single RNA recognition motif point mutation.

25 August 2018

1 reference

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Communication with the exon-junction complex and activation of nonsense-mediated decay by human Upf proteins occur in the cytoplasm.

25 August 2018

1 reference

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Location of a possible miRNA processing site in SmD3/SmB nuclear bodies in Arabidopsis.

25 August 2018

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Quality control of eukaryotic mRNA: safeguarding cells from abnormal mRNA function

25 August 2018

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Nonsense-mediated mRNA decay (NMD) silences the accumulation of aberrant trypsin proteinase inhibitor mRNA in Nicotiana attenuata.

25 August 2018

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Interaction of a plant virus-encoded protein with the major nucleolar protein fibrillarin is required for systemic virus infection

25 August 2018

1 reference

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mRNA quality control: an ancient machinery recognizes and degrades mRNAs with nonsense codons.

25 August 2018

1 reference

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The multifunctional nucleolus

25 August 2018

1 reference

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Identification of nuclear dicing bodies containing proteins for microRNA biogenesis in living Arabidopsis plants

25 August 2018

1 reference

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Cajal bodies and the nucleolus are required for a plant virus systemic infection

25 August 2018

1 reference

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Depletion of the yeast nuclear exosome subunit Rrp6 results in accumulation of polyadenylated RNAs in a discrete domain within the nucleolus

25 August 2018

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Arabidopsis primary microRNA processing proteins HYL1 and DCL1 define a nuclear body distinct from the Cajal body

25 August 2018

1 reference

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The nonsense-mediated decay RNA surveillance pathway

25 August 2018

1 reference

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P bodies and the control of mRNA translation and degradation

25 August 2018

1 reference

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A conserved role for cytoplasmic poly(A)-binding protein 1 (PABPC1) in nonsense-mediated mRNA decay

25 August 2018

1 reference

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RNA viruses: hijacking the dynamic nucleolus

25 August 2018

1 reference

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Stability of plant mRNAs depends on the length of the 3'-untranslated region.

25 August 2018

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25 August 2018

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MicroRNA-206 colocalizes with ribosome-rich regions in both the nucleolus and cytoplasm of rat myogenic cells

25 August 2018

1 reference

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Both introns and long 3'-UTRs operate as cis-acting elements to trigger nonsense-mediated decay in plants

25 August 2018

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Nucleolar trafficking is essential for nuclear export of intronless herpesvirus mRNA.

25 August 2018

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Evolutionary conservation and regulation of particular alternative splicing events in plant SR proteins

25 August 2018

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25 August 2018

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An ARGONAUTE4-containing nuclear processing center colocalized with Cajal bodies in Arabidopsis thaliana.

25 August 2018

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UPF1 is required for nonsense-mediated mRNA decay (NMD) and RNAi in Arabidopsis.

25 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2729600

Early nonsense: mRNA decay solves a translational problem

25 August 2018

1 reference

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Structure and function of the nucleolus in the spotlight

25 August 2018

1 reference

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EJC-independent degradation of nonsense immunoglobulin-mu mRNA depends on 3' UTR length.

25 August 2018

1 reference

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The road much traveled: trafficking in the cell nucleus

25 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2729600

Binding of a novel SMG-1-Upf1-eRF1-eRF3 complex (SURF) to the exon junction complex triggers Upf1 phosphorylation and nonsense-mediated mRNA decay

25 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2729600

Mechanistic links between nonsense-mediated mRNA decay and pre-mRNA splicing in mammalian cells

25 August 2018

1 reference

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Concepts in nuclear architecture

25 August 2018

1 reference

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High-throughput protein localization in Arabidopsis using Agrobacterium-mediated transient expression of GFP-ORF fusions.

25 August 2018

1 reference

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The prototype gamma-2 herpesvirus nucleocytoplasmic shuttling protein, ORF 57, transports viral RNA through the cellular mRNA export pathway

25 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2729600

Proteomic analysis of the Arabidopsis nucleolus suggests novel nucleolar functions

25 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2729600

25 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2729600

Nonsense surveillance regulates expression of diverse classes of mammalian transcripts and mutes genomic noise

25 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2729600

Efficient downregulation of immunoglobulin mu mRNA with premature translation-termination codons requires the 5'-half of the VDJ exon

25 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2729600

The nucleolus is involved in mRNA export from the nucleus in fission yeast

25 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2729600

Does protein synthesis occur in the nucleus?

25 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2729600

The ever-increasing complexities of the exon junction complex

25 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2729600

Ribosome biogenesis: of knobs and RNA processing

25 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2729600

Nonsense-mediated mRNA decay: splicing, translation and mRNP dynamics

25 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2729600

Nuclear retention of unspliced mRNAs in yeast is mediated by perinuclear Mlp1.

25 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2729600

Genome-wide analysis of mRNAs regulated by the nonsense-mediated and 5' to 3' mRNA decay pathways in yeast

25 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2729600

Disruption of the nucleolus mediates stabilization of p53 in response to DNA damage and other stresses

25 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2729600

Nuclear speckles: a model for nuclear organelles

25 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2729600

The interplay of nuclear mRNP assembly, mRNA surveillance and export

25 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2729600

Control of eukaryotic protein synthesis by upstream open reading frames in the 5'-untranslated region of an mRNA

25 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2729600

Intranuclear degradation of nonsense codon-containing mRNA

25 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2729600

25 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2729600

Coupled transcription and translation within nuclei of mammalian cells.

25 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2729600

Human Upf proteins target an mRNA for nonsense-mediated decay when bound downstream of a termination codon

25 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2729600

Identification and characterization of human orthologues to Saccharomyces cerevisiae Upf2 protein and Upf3 protein (Caenorhabditis elegans SMG-4)

25 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2729600

Pre-mRNA splicing in higher plants.

25 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2729600

Floral dip: a simplified method for Agrobacterium-mediated transformation of Arabidopsis thaliana

25 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2729600

The plurifunctional nucleolus

25 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2729600

Nucleolar localization of myc transcripts

25 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2729600

Nonsense-mediated mRNA decay: target genes and functional diversification of effectors

25 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2729600

UPF3 suppresses aberrant spliced mRNA in Arabidopsis

30 November 2018

1 reference

12 December 2020

The organization of spliceosomal components in the nuclei of higher plants

1 reference

12 December 2020

Small nucleolar RNAs and pre-rRNA processing in plants

1 reference

12 December 2020

Monitoring changes in alternative precursor messenger RNA splicing in multiple gene transcripts

1 reference

12 December 2020

Context analysis of termination codons in mRNA that are recognized by plant NMD

1 reference

12 December 2020

The lba1 mutation of UPF1 RNA helicase involved in nonsense-mediated mRNA decay causes pleiotropic phenotypic changes and altered sugar signalling in Arabidopsis

1 reference

12 December 2020

The three-dimensional arcitecture of the EJC core

1 reference

12 December 2020

The Arabidopsis chromatin-modifying nuclear siRNA pathway involves a nucleolar RNA processing center

1 reference

12 December 2020

Identifiers

DOI

10.1105/TPC.109.067736

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:19602621%20AND%20SRC:MED&resulttype=core&format=json

2 February 2020

0 references

1 reference