(Q38346636)

2 September 2017

Genome-wide analysis of mRNAs regulated by the nonsense-mediated and 5' to 3' mRNA decay pathways in yeast (English)

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2 September 2017

Shuyun Dong

5

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author name string

Feng He

1

1 reference

2 September 2017

Xiangrui Li

2

1 reference

2 September 2017

Phyllis Spatrick

3

1 reference

2 September 2017

Ryan Casillo

4

1 reference

2 September 2017

Allan Jacobson

6

1 reference

2 September 2017

1 December 2003

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2 September 2017

1 reference

2 September 2017

12

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2 September 2017

6

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2 September 2017

1439-1452

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Degradation of mRNA in eukaryotes

2 September 2017

1 reference

https://api.crossref.org/works/10.1016%2FS1097-2765%2803%2900446-5

7 January 2021

An essential component of the decapping enzyme required for normal rates of mRNA turnover

1 reference

https://api.crossref.org/works/10.1016%2FS1097-2765%2803%2900446-5

7 January 2021

Computational modeling of eukaryotic mRNA turnover

1 reference

https://api.crossref.org/works/10.1016%2FS1097-2765%2803%2900446-5

7 January 2021

Computational modeling and experimental analysis of nonsense-mediated decay in yeast

1 reference

https://api.crossref.org/works/10.1016%2FS1097-2765%2803%2900446-5

7 January 2021

mRNAs encoding telomerase components and regulators are controlled by UPF genes in Saccharomyces cerevisiae

1 reference

https://api.crossref.org/works/10.1016%2FS1097-2765%2803%2900446-5

7 January 2021

A turnover pathway for both stable and unstable mRNAs in yeast: evidence for a requirement for deadenylation

1 reference

https://api.crossref.org/works/10.1016%2FS1097-2765%2803%2900446-5

7 January 2021

The DCP2 protein is required for mRNA decapping in Saccharomyces cerevisiae and contains a functional MutT motif

1 reference

https://api.crossref.org/works/10.1016%2FS1097-2765%2803%2900446-5

7 January 2021

Cluster analysis and display of genome-wide expression patterns

1 reference

https://api.crossref.org/works/10.1016%2FS1097-2765%2803%2900446-5

7 January 2021

A novel programed frameshift expresses the POL3 gene of retrotransposon Ty3 of yeast: frameshifting without tRNA slippage.

1 reference

https://api.crossref.org/works/10.1016%2FS1097-2765%2803%2900446-5

7 January 2021

An mRNA surveillance mechanism that eliminates transcripts lacking termination codons

1 reference

https://api.crossref.org/works/10.1016%2FS1097-2765%2803%2900446-5

7 January 2021

Nonsense-mediated mRNA decay in Saccharomyces cerevisiae

1 reference

https://api.crossref.org/works/10.1016%2FS1097-2765%2803%2900446-5

7 January 2021

A small reservoir of disabled ORFs in the yeast genome and its implications for the dynamics of proteome evolution.

1 reference

https://api.crossref.org/works/10.1016%2FS1097-2765%2803%2900446-5

7 January 2021

Identification of a novel component of the nonsense-mediated mRNA decay pathway by use of an interacting protein screen

1 reference

https://api.crossref.org/works/10.1016%2FS1097-2765%2803%2900446-5

7 January 2021

Upf1p, Nmd2p, and Upf3p regulate the decapping and exonucleolytic degradation of both nonsense-containing mRNAs and wild-type mRNAs

1 reference

https://api.crossref.org/works/10.1016%2FS1097-2765%2803%2900446-5

7 January 2021

Stabilization and ribosome association of unspliced pre-mRNAs in a yeast upf1- mutant

1 reference

https://api.crossref.org/works/10.1016%2FS1097-2765%2803%2900446-5

7 January 2021

Upf1p, Nmd2p, and Upf3p are interacting components of the yeast nonsense-mediated mRNA decay pathway

1 reference

https://api.crossref.org/works/10.1016%2FS1097-2765%2803%2900446-5

7 January 2021

Yeast cells lacking 5'-->3' exoribonuclease 1 contain mRNA species that are poly(A) deficient and partially lack the 5' cap structure

1 reference

https://api.crossref.org/works/10.1016%2FS1097-2765%2803%2900446-5

7 January 2021

The 3' to 5' degradation of yeast mRNAs is a general mechanism for mRNA turnover that requires the SKI2 DEVH box protein and 3' to 5' exonucleases of the exosome complex

1 reference

https://api.crossref.org/works/10.1016%2FS1097-2765%2803%2900446-5

7 January 2021

Interrelationships of the pathways of mRNA decay and translation in eukaryotic cells

1 reference

https://api.crossref.org/works/10.1016%2FS1097-2765%2803%2900446-5

7 January 2021

The product of the yeast UPF1 gene is required for rapid turnover of mRNAs containing a premature translational termination codon

1 reference

https://api.crossref.org/works/10.1016%2FS1097-2765%2803%2900446-5

7 January 2021

Yeast Upf proteins required for RNA surveillance affect global expression of the yeast transcriptome

1 reference

https://api.crossref.org/works/10.1016%2FS1097-2765%2803%2900446-5

7 January 2021

Telomere length regulation and telomeric chromatin require the nonsense-mediated mRNA decay pathway

1 reference

https://api.crossref.org/works/10.1016%2FS1097-2765%2803%2900446-5

7 January 2021

Interference of nonsense mutations with eukaryotic messenger RNA stability

1 reference

https://api.crossref.org/works/10.1016%2FS1097-2765%2803%2900446-5

7 January 2021

Upf1p control of nonsense mRNA translation is regulated by Nmd2p and Upf3p

1 reference

https://api.crossref.org/works/10.1016%2FS1097-2765%2803%2900446-5

7 January 2021

Nonsense-containing mRNAs that accumulate in the absence of a functional nonsense-mediated mRNA decay pathway are destabilized rapidly upon its restitution

1 reference

https://api.crossref.org/works/10.1016%2FS1097-2765%2803%2900446-5

7 January 2021

Poly(A)-binding proteins: multifunctional scaffolds for the post-transcriptional control of gene expression

1 reference

https://api.crossref.org/works/10.1016%2FS1097-2765%2803%2900446-5

7 January 2021

Novel Upf2p orthologues suggest a functional link between translation initiation and nonsense surveillance complexes

1 reference

https://api.crossref.org/works/10.1016%2FS1097-2765%2803%2900446-5

7 January 2021

An NMD pathway in yeast involving accelerated deadenylation and exosome-mediated 3'-->5' degradation

1 reference

https://api.crossref.org/works/10.1016%2FS1097-2765%2803%2900446-5

7 January 2021

Programmed translational frameshifting in a gene required for yeast telomere replication

1 reference

https://api.crossref.org/works/10.1016%2FS1097-2765%2803%2900446-5

7 January 2021

Premature translational termination triggers mRNA decapping

1 reference

https://api.crossref.org/works/10.1016%2FS1097-2765%2803%2900446-5

7 January 2021

Aberrant mRNAs with extended 3' UTRs are substrates for rapid degradation by mRNA surveillance

1 reference

https://api.crossref.org/works/10.1016%2FS1097-2765%2803%2900446-5

7 January 2021

Deadenylation of the unstable mRNA encoded by the yeast MFA2 gene leads to decapping followed by 5'-->3' digestion of the transcript

1 reference

https://api.crossref.org/works/10.1016%2FS1097-2765%2803%2900446-5

7 January 2021

Turnover mechanisms of the stable yeast PGK1 mRNA

1 reference

https://api.crossref.org/works/10.1016%2FS1097-2765%2803%2900446-5

7 January 2021

The relationship between eukaryotic translation and mRNA stability. A short upstream open reading frame strongly inhibits translational initiation and greatly accelerates mRNA degradation in the yeast Saccharomyces cerevisiae.

1 reference

https://api.crossref.org/works/10.1016%2FS1097-2765%2803%2900446-5

7 January 2021

SMG-2 is a phosphorylated protein required for mRNA surveillance in Caenorhabditis elegans and related to Upf1p of yeast

1 reference

https://api.crossref.org/works/10.1016%2FS1097-2765%2803%2900446-5

7 January 2021

mRNA destabilization triggered by premature translational termination depends on at least three cis-acting sequence elements and one trans-acting factor

1 reference

https://api.crossref.org/works/10.1016%2FS1097-2765%2803%2900446-5

7 January 2021

mRNA surveillance by the Caenorhabditis elegans smg genes

1 reference

https://api.crossref.org/works/10.1016%2FS1097-2765%2803%2900446-5

7 January 2021

The RNA binding protein Pub1 modulates the stability of transcripts containing upstream open reading frames

1 reference

https://api.crossref.org/works/10.1016%2FS1097-2765%2803%2900446-5

7 January 2021

Identification and characterization of human orthologues to Saccharomyces cerevisiae Upf2 protein and Upf3 protein (Caenorhabditis elegans SMG-4)

1 reference

https://api.crossref.org/works/10.1016%2FS1097-2765%2803%2900446-5

7 January 2021

Interpreting patterns of gene expression with self-organizing maps: methods and application to hematopoietic differentiation

1 reference

https://api.crossref.org/works/10.1016%2FS1097-2765%2803%2900446-5

7 January 2021

Exosome-mediated recognition and degradation of mRNAs lacking a termination codon

1 reference

https://api.crossref.org/works/10.1016%2FS1097-2765%2803%2900446-5

7 January 2021

The yeast transcription factor genes YAP1 and YAP2 are subject to differential control at the levels of both translation and mRNA stability.

1 reference

https://api.crossref.org/works/10.1016%2FS1097-2765%2803%2900446-5

7 January 2021

Precision and functional specificity in mRNA decay

1 reference

https://api.crossref.org/works/10.1016%2FS1097-2765%2803%2900446-5

7 January 2021

An internal open reading frame triggers nonsense-mediated decay of the yeast SPT10 mRNA.

1 reference

https://api.crossref.org/works/10.1016%2FS1097-2765%2803%2900446-5

7 January 2021

Genome-wide expression monitoring in Saccharomyces cerevisiae

1 reference

https://api.crossref.org/works/10.1016%2FS1097-2765%2803%2900446-5

7 January 2021

10.1016/S1097-2765(03)00446-5

Identifiers

DOI

1 reference

2 September 2017

1 reference