(Q54444450)

English

Autogenous regulation of Escherichia coli polynucleotide phosphorylase during cold acclimation by transcription termination and antitermination.

scientific article published on 24 March 2007

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scholarly article

1 reference

Europe PubMed Central

29 May 2018

http://europepmc.org/abstract/MED/17384964

Autogenous regulation of Escherichia coli polynucleotide phosphorylase during cold acclimation by transcription termination and antitermination. (English)

1 reference

Europe PubMed Central

29 May 2018

http://europepmc.org/abstract/MED/17384964

Escherichia coli

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inferred from title

Federica Briani

object named as

Federica Briani

5

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object named as

Gianni Dehò

6

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author name string

Paolo Marchi

1

1 reference

Europe PubMed Central

29 May 2018

http://europepmc.org/abstract/MED/17384964

Vera Longhi

2

1 reference

Europe PubMed Central

29 May 2018

http://europepmc.org/abstract/MED/17384964

Sandro Zangrossi

3

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Europe PubMed Central

29 May 2018

http://europepmc.org/abstract/MED/17384964

Elisa Gaetani

4

1 reference

Europe PubMed Central

29 May 2018

http://europepmc.org/abstract/MED/17384964

publication date

24 March 2007

1 reference

Europe PubMed Central

29 May 2018

http://europepmc.org/abstract/MED/17384964

Molecular Genetics and Genomics

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Europe PubMed Central

29 May 2018

http://europepmc.org/abstract/MED/17384964

278

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Europe PubMed Central

29 May 2018

http://europepmc.org/abstract/MED/17384964

1

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Europe PubMed Central

29 May 2018

http://europepmc.org/abstract/MED/17384964

75-84

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Europe PubMed Central

29 May 2018

http://europepmc.org/abstract/MED/17384964

https://scigraph.springernature.com/pub.10.1007/s00438-007-0231-3

0 references

Rho-dependent transcription termination: more questions than answers

1 reference

https://pubmed.ncbi.nlm.nih.gov/17384964

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Characterization of Escherichia coli cspE, whose product negatively regulates transcription of cspA, the gene for the major cold shock protein

1 reference

https://pubmed.ncbi.nlm.nih.gov/17384964

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Induction of proteins in response to low temperature in Escherichia coli

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https://pubmed.ncbi.nlm.nih.gov/17384964

12 December 2020

based on heuristic

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A Rho-Dependent Transcription Termination Site Regulated by Bacteriophage P4 RNA Immunity Factor

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https://pubmed.ncbi.nlm.nih.gov/17384964

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Rapid determination of nucleotides that define tRNA(Gly) acceptor identity

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https://pubmed.ncbi.nlm.nih.gov/17384964

12 December 2020

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Levels of major proteins of Escherichia coli during growth at different temperatures

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https://pubmed.ncbi.nlm.nih.gov/17384964

12 December 2020

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Nucleotide sequence of the pnp gene of Escherichia coli encoding polynucleotide phosphorylase. Homology of the primary structure of the protein with the RNA-binding domain of ribosomal protein S1.

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https://pubmed.ncbi.nlm.nih.gov/17384964

12 December 2020

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A consensus motif common to all rho-dependent prokaryotic transcription terminators

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https://pubmed.ncbi.nlm.nih.gov/17384964

12 December 2020

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Major cold shock protein of Escherichia coli

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https://pubmed.ncbi.nlm.nih.gov/17384964

12 December 2020

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From polynucleotide phosphorylase to neurobiology.

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https://pubmed.ncbi.nlm.nih.gov/17384964

12 December 2020

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inferred from PubMed ID database lookup

Bacteriophage P4 immunity controlled by small RNAs via transcription termination

1 reference

https://pubmed.ncbi.nlm.nih.gov/17384964

12 December 2020

based on heuristic

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Polynucleotide phosphorylase of Escherichia coli induces the degradation of its RNase III processed messenger by preventing its translation

1 reference

https://pubmed.ncbi.nlm.nih.gov/17384964

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Transcriptional and post-transcriptional control of polynucleotide phosphorylase during cold acclimation in Escherichia coli

1 reference

https://pubmed.ncbi.nlm.nih.gov/17384964

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Escherichia coli CspA-family RNA chaperones are transcription antiterminators

1 reference

https://pubmed.ncbi.nlm.nih.gov/17384964

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Initiation, attenuation and RNase III processing of transcripts from the Escherichia coli operon encoding ribosomal protein S15 and polynucleotide phosphorylase

1 reference

https://pubmed.ncbi.nlm.nih.gov/17384964

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

RNA sequence and secondary structure requirements for rho-dependent transcription termination

1 reference

https://pubmed.ncbi.nlm.nih.gov/17384964

12 December 2020

based on heuristic

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In vivo effect of NusB and NusG on rRNA transcription antitermination

1 reference

https://pubmed.ncbi.nlm.nih.gov/17384964

12 December 2020

based on heuristic

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Interactions of Escherichia coli transcription termination factor rho with RNA. II. Electron microscopy and nuclease protection experiments

1 reference

https://pubmed.ncbi.nlm.nih.gov/17384964

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Effect on DNA transcription of nucleotide sequences upstream to T7 promoter

1 reference

https://pubmed.ncbi.nlm.nih.gov/17384964

12 December 2020

based on heuristic

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Use of a gene encoding a suppressor tRNA as a reporter of transcription: analyzing the action of the Nun protein of bacteriophage HK022.

1 reference

https://pubmed.ncbi.nlm.nih.gov/17384964

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Polynucleotide phosphorylase, RNase II and RNase E play different roles in the in vivo modulation of polyadenylation in Escherichia coli

1 reference

https://pubmed.ncbi.nlm.nih.gov/17384964

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Analysis of the Escherichia coli RNA degradosome composition by a proteomic approach.

1 reference

https://pubmed.ncbi.nlm.nih.gov/17384964

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

The nucleic acid melting activity of Escherichia coli CspE is critical for transcription antitermination and cold acclimation of cells

1 reference

https://pubmed.ncbi.nlm.nih.gov/17384964

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Bacterial cold shock responses.

1 reference

https://pubmed.ncbi.nlm.nih.gov/17384964

12 December 2020

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Control of rRNA transcription in Escherichia coli

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https://pubmed.ncbi.nlm.nih.gov/17384964

12 December 2020

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CspA, the major cold-shock protein of Escherichia coli, is an RNA chaperone.

1 reference

https://pubmed.ncbi.nlm.nih.gov/17384964

12 December 2020

based on heuristic

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Characterization of the detachable Rho-dependent transcription terminator of the fimE gene in Escherichia coli K-12

1 reference

https://pubmed.ncbi.nlm.nih.gov/17384964

12 December 2020

based on heuristic

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A novel mutation in the KH domain of polynucleotide phosphorylase affects autoregulation and mRNA decay in Escherichia coli

1 reference

https://pubmed.ncbi.nlm.nih.gov/17384964

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Revisited gene regulation in bacteriophage lambda.

1 reference

https://pubmed.ncbi.nlm.nih.gov/17384964

12 December 2020

based on heuristic

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The transcriptional regulator RfaH stimulates RNA chain synthesis after recruitment to elongation complexes by the exposed nontemplate DNA strand.

1 reference

https://pubmed.ncbi.nlm.nih.gov/17384964

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

The RNA degradosome: life in the fast lane of adaptive molecular evolution.

1 reference

https://pubmed.ncbi.nlm.nih.gov/17384964

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Genetic analysis of polynucleotide phosphorylase structure and functions

1 reference

https://pubmed.ncbi.nlm.nih.gov/17384964

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Characterization of Polynucleotide Phosphorylase Mutants ofEscherichia coli

1 reference

https://pubmed.ncbi.nlm.nih.gov/17384964

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Cold-temperature induction of Escherichia coli polynucleotide phosphorylase occurs by reversal of its autoregulation

1 reference

https://pubmed.ncbi.nlm.nih.gov/17384964

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

The first step in the functional inactivation of the Escherichia coli polynucleotide phosphorylase messenger is a ribonuclease III processing at the 5' end.

1 reference

https://pubmed.ncbi.nlm.nih.gov/17384964

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Rho-dependent terminators and transcription termination

1 reference

https://pubmed.ncbi.nlm.nih.gov/17384964

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

PNPase autocontrols its expression by degrading a double-stranded structure in the pnp mRNA leader

1 reference

https://pubmed.ncbi.nlm.nih.gov/17384964

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

The KH domain occurs in a diverse set of RNA-binding proteins that include the antiterminator NusA and is probably involved in binding to nucleic acid.

1 reference

https://pubmed.ncbi.nlm.nih.gov/17384964

12 December 2020

based on heuristic

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Damage and derepression in Escherichia coli resulting from growth at low temperatures

1 reference

https://pubmed.ncbi.nlm.nih.gov/17384964

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

A duplicated fold is the structural basis for polynucleotide phosphorylase catalytic activity, processivity, and regulation

1 reference

https://pubmed.ncbi.nlm.nih.gov/17384964

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Cold-shock response and cold-shock proteins

1 reference

https://pubmed.ncbi.nlm.nih.gov/17384964

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Polynucleotide phosphorylase of Escherichia coli is required for the establishment of bacteriophage P4 immunity

1 reference

https://pubmed.ncbi.nlm.nih.gov/17384964

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Polynucleotide phosphorylase functions both as a 3' right-arrow 5' exonuclease and a poly(A) polymerase in Escherichia coli

1 reference

https://pubmed.ncbi.nlm.nih.gov/17384964

12 December 2020

based on heuristic

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Physical and functional interactions among RNase E, polynucleotide phosphorylase and the cold-shock protein, CsdA: evidence for a 'cold shock degradosome'.

1 reference

https://pubmed.ncbi.nlm.nih.gov/17384964

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Regulation by transcription attenuation in bacteria: how RNA provides instructions for transcription termination/antitermination decisions

1 reference

https://pubmed.ncbi.nlm.nih.gov/17384964

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

CspI, the ninth member of the CspA family of Escherichia coli, is induced upon cold shock

1 reference

https://pubmed.ncbi.nlm.nih.gov/17384964

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Genetic analysis of the immunity region of phage-plasmid P4.

1 reference

https://pubmed.ncbi.nlm.nih.gov/17384964

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Isolation and characterization of conditional lethal mutants of Escherichia coli defective in transcription termination factor rho

1 reference

https://pubmed.ncbi.nlm.nih.gov/17384964

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

E.coli polynucleotide phosphorylase expression is autoregulated through an RNase III-dependent mechanism

1 reference

https://pubmed.ncbi.nlm.nih.gov/17384964

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Isolation and Mapping of Polynucleotide Phosphorylase Mutants of Escherichia coli

1 reference

https://pubmed.ncbi.nlm.nih.gov/17384964

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Virulence regulators RfaH and YaeQ do not operate in the same pathway.

1 reference

https://pubmed.ncbi.nlm.nih.gov/17384964

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Growth abnormalities in Hfr Derivatives of Escherichia coli Strain c

1 reference

https://pubmed.ncbi.nlm.nih.gov/17384964

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Cold shock induces a major ribosomal-associated protein that unwinds double-stranded RNA in Escherichia coli

1 reference

https://pubmed.ncbi.nlm.nih.gov/17384964

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

The use of a tRNA as a transcriptional reporter: the T7 late promoter is extremely efficient in Escherichia coli but its transcripts are poorly expressed.

1 reference

https://pubmed.ncbi.nlm.nih.gov/17384964

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Linkage map of Escherichia coli K-12, edition 10: the traditional map

1 reference

https://pubmed.ncbi.nlm.nih.gov/17384964

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

An mRNA degrading complex in Rhodobacter capsulatus.

1 reference

https://pubmed.ncbi.nlm.nih.gov/17384964

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Transcriptional and post-transcriptional control of cold-shock genes

1 reference

https://pubmed.ncbi.nlm.nih.gov/17384964

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

The CspA family in Escherichia coli: multiple gene duplication for stress adaptation

1 reference

https://pubmed.ncbi.nlm.nih.gov/17384964

12 December 2020

based on heuristic

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Polynucleotide phosphorylase is necessary for competence development in Bacillus subtilis.

1 reference

https://pubmed.ncbi.nlm.nih.gov/17384964

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

A mutation in polynucleotide phosphorylase from Escherichia coli impairing RNA binding and degradosome stability

1 reference

https://pubmed.ncbi.nlm.nih.gov/17384964

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Identifiers

10.1007/S00438-007-0231-3

1 reference

Europe PubMed Central

29 May 2018

http://europepmc.org/abstract/MED/17384964

1 reference

Europe PubMed Central

29 May 2018

http://europepmc.org/abstract/MED/17384964

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