(Q54466501)

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:16629675%20AND%20SRC:MED&resulttype=core&format=json

19 January 2020

title

The guanosine tetraphosphate (ppGpp) alarmone, DksA and promoter affinity for RNA polymerase in regulation of sigma-dependent transcription (English)

1 reference

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19 January 2020

5

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19 January 2020

author name string

Lisandro M D Bernardo

1

1 reference

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19 January 2020

Linda U M Johansson

2

1 reference

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19 January 2020

Dafne Solera

3

1 reference

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19 January 2020

Eleonore Skärfstad

4

1 reference

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19 January 2020

language of work or name

English

0 references

publication date

1 May 2006

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:16629675%20AND%20SRC:MED&resulttype=core&format=json

19 January 2020

published in

Molecular Microbiology

1 reference

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19 January 2020

volume

60

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19 January 2020

page(s)

749-764

1 reference

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19 January 2020

issue

3

1 reference

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Global gene expression profiling in Escherichia coli K12. The effects of integration host factor

19 January 2020

cites work

1 reference

https://api.crossref.org/works/10.1111%2FJ.1365-2958.2006.05129.X

Structural basis for transcription regulation by alarmone ppGpp.

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1365-2958.2006.05129.X

Mechanism of regulation of transcription initiation by ppGpp. II. Models for positive control based on properties of RNAP mutants and competition for RNAP.

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1365-2958.2006.05129.X

Compilation and analysis of sigma(54)-dependent promoter sequences

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1365-2958.2006.05129.X

Active recruitment of sigma54-RNA polymerase to the Pu promoter of Pseudomonas putida: role of IHF and alphaCTD.

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1365-2958.2006.05129.X

DksA affects ppGpp induction of RpoS at a translational level

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1365-2958.2006.05129.X

DNA bending and the initiation of transcription at sigma54-dependent bacterial promoters

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1365-2958.2006.05129.X

Positive and negative effects of DNA bending on activation of transcription from a distant site

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1365-2958.2006.05129.X

A set of compatible tac promoter expression vectors.

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1365-2958.2006.05129.X

Defining a bacteriophage T4 late promoter: absence of a "-35" region.

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1365-2958.2006.05129.X

The integration host factor stimulates interaction of RNA polymerase with NIFA, the transcriptional activator for nitrogen fixation operons.

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1365-2958.2006.05129.X

Functional modulation of Escherichia coli RNA polymerase

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1365-2958.2006.05129.X

A stationary phase protein in Escherichia coli with binding activity to the major sigma subunit of RNA polymerase

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1365-2958.2006.05129.X

Mapping of the Rsd contact site on the sigma 70 subunit of Escherichia coli RNA polymerase

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1365-2958.2006.05129.X

Regulation of sigma factor competition by the alarmone ppGpp

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1365-2958.2006.05129.X

Essential steps in the ppGpp-dependent regulation of bacterial ribosomal RNA promoters can be explained by substrate competition

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1365-2958.2006.05129.X

The role of the alarmone (p)ppGpp in sigma N competition for core RNA polymerase.

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1365-2958.2006.05129.X

ppGpp: a global regulator in Escherichia coli.

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1365-2958.2006.05129.X

In vivo studies on the interaction of RNA polymerase-sigma 54 with the Klebsiella pneumoniae and Rhizobium meliloti nifH promoters. The role of NifA in the formation of an open promoter complex

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1365-2958.2006.05129.X

Growth versus maintenance: a trade-off dictated by RNA polymerase availability and sigma factor competition?

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1365-2958.2006.05129.X

An active role for a structured B-linker in effector control of the sigma54-dependent regulator DmpR.

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1365-2958.2006.05129.X

rRNA transcription in Escherichia coli

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1365-2958.2006.05129.X

DksA potentiates direct activation of amino acid promoters by ppGpp

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1365-2958.2006.05129.X

Role of integration host factor in stimulating transcription from the sigma 54-dependent nifH promoter

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1365-2958.2006.05129.X

Integrated regulation in response to aromatic compounds: from signal sensing to attractive behaviour

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1365-2958.2006.05129.X

In vivo and in vitro effects of integration host factor at the DmpR-regulated sigma(54)-dependent Po promoter

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1365-2958.2006.05129.X

In vivo UV laser footprinting of the Pseudomonas putidasigma 54Pu promoter reveals that integration host factor couples transcriptional activity to growth phase

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1365-2958.2006.05129.X

Studies of the Escherichia coli Rsd-sigma70 complex

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1365-2958.2006.05129.X

The regulatory N-terminal region of the aromatic-responsive transcriptional activator DmpR constrains nucleotide-triggered multimerisation

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1365-2958.2006.05129.X

Mechanochemical ATPases and transcriptional activation.

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1365-2958.2006.05129.X

The rpoB mutants destabilizing initiation complexes at stringently controlled promoters behave like "stringent" RNA polymerases in Escherichia coli

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1365-2958.2006.05129.X

Regulation through the Secondary Channel—Structural Framework for ppGpp-DksA Synergism during Transcription

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1365-2958.2006.05129.X