(Q54692751)

2 June 2018

title

Modulation of base-specific mutation and recombination rates enables functional adaptation within the context of the genetic code. (English)

1 reference

2 June 2018

author

Michael W. Deem

series ordinal

3

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2 June 2018

Leonard D Bogarad

series ordinal

2

object named as

Leonard D Bogarad

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2 June 2018

author name string

Taison Tan

series ordinal

1

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2 June 2018

publication date

1 September 2004

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2 June 2018

Journal of Molecular Evolution

published in

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2 June 2018

volume

59

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2 June 2018

page(s)

385-399

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2 June 2018

issue

3

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2 June 2018

https://scigraph.springernature.com/pub.10.1007/s00239-004-2633-8

exact match

0 references

cites work

Approximate methods for estimating the pattern of nucleotide substitution and the variation of substitution rates among sites.

1 reference

Crossref

https://api.crossref.org/works/10.1007%2FS00239-004-2633-8

Hill-Robertson interference is a minor determinant of variations in codon bias across Drosophila melanogaster and Caenorhabditis elegans genomes.

21 January 2018

1 reference

12 December 2020

A new method for estimating synonymous and nonsynonymous rates of nucleotide substitution considering the relative likelihood of nucleotide and codon changes

1 reference

12 December 2020

Selfish operons and speciation by gene transfer

1 reference

12 December 2020

Stationary-phase mutation in the bacterial chromosome: recombination protein and DNA polymerase IV dependence

1 reference

12 December 2020

Somatic hypermutation

1 reference

12 December 2020

Role of the Amino-Acid ‘Code’ and of Selection for Conformation in the Evolution of Proteins

1 reference

12 December 2020

DNA polymerases in immunity: profiting from errors

1 reference

12 December 2020

Managing DNA polymerases: coordinating DNA replication, DNA repair, and DNA recombination

1 reference

12 December 2020

A hierarchical approach to protein molecular evolution

1 reference

12 December 2020

A codon-based model of nucleotide substitution for protein-coding DNA sequences

1 reference

12 December 2020

Mutator dynamics in fluctuating environments.

1 reference

12 December 2020

Codon bias targets mutation.

1 reference

12 December 2020

Transposons but not retrotransposons are located preferentially in regions of high recombination rate in Caenorhabditis elegans

1 reference

12 December 2020

Di- and trinucleotide target preferences of somatic mutagenesis in normal and autoreactive B cells

1 reference

12 December 2020

Codon bias and plasticity in immunoglobulins

1 reference

12 December 2020

Homology-independent protein engineering

1 reference

12 December 2020

Population, evolutionary and genomic consequences of interference selection

1 reference

12 December 2020

Designed evolution of enzymatic properties

1 reference

12 December 2020

Amino acid substitution matrices from protein blocks

1 reference

12 December 2020

Codon usage in yeast: cluster analysis clearly differentiates highly and lowly expressed genes

1 reference

12 December 2020

The TATA binding protein, c-Myc and survivin genes are not somatically hypermutated, while Ig and BCL6 genes are hypermutated in human memory B cells.

1 reference

12 December 2020

Modeling DNA mutation and recombination for directed evolution experiments

1 reference

12 December 2020

A single highly mutable catalytic site amino acid is critical for DNA polymerase fidelity

1 reference

12 December 2020

Codon bias and frequency-dependent selection on the hemagglutinin epitopes of influenza A virus

1 reference

12 December 2020

Local Rates of Recombination Are Positively Correlated with GC Content in the Human Genome

1 reference

12 December 2020

eCodonOpt: a systematic computational framework for optimizing codon usage in directed evolution experiments

1 reference

12 December 2020

Substitution bias, rapid saturation, and the use of mtDNA for nematode systematics

1 reference

12 December 2020

On the evolution of the genetic code

1 reference

12 December 2020

How the genome readies itself for evolution

1 reference

12 December 2020

PERSPECTIVE: COMPLEX ADAPTATIONS AND THE EVOLUTION OF EVOLVABILITY.

1 reference

12 December 2020

Protein binding versus protein folding: the role of hydrophilic bridges in protein associations

1 reference

12 December 2020

Natural selection on synonymous sites is correlated with gene length and recombination in Drosophila.

1 reference

12 December 2020

The many faces of DNA polymerases: strategies for mutagenesis and for mutational avoidance

1 reference

12 December 2020

Genetic Code: Aspects of Organization

1 reference

12 December 2020

Patterns of nucleotide substitution in Drosophila and mammalian genomes

1 reference

12 December 2020

Designing drugs against heterogeneous targets

1 reference

12 December 2020

The relation between frequencies of amino acids and ordered trinucleotides

1 reference

12 December 2020

Applications of DNA shuffling to pharmaceuticals and vaccines

1 reference

12 December 2020

The evolution of evolvability in genetic linkage patterns

1 reference

12 December 2020

Predicting regional mutability in antibody V genes based solely on di- and trinucleotide sequence composition

1 reference

12 December 2020

Expression pattern and, surprisingly, gene length shape codon usage in Caenorhabditis, Drosophila, and Arabidopsis.

1 reference

12 December 2020

Electrostatic aspects of protein-protein interactions.

1 reference

12 December 2020

The correlation between intron length and recombination in drosophila. Dynamic equilibrium between mutational and selective forces.

1 reference

12 December 2020

Integrating genomics, bioinformatics, and classical genetics to study the effects of recombination on genome evolution

1 reference

12 December 2020

Recombination and mammalian genome evolution

1 reference

12 December 2020

Interactions between natural selection, recombination and gene density in the genes of Drosophila.

1 reference

12 December 2020

10.1007/S00239-004-2633-8

Identifiers

DOI

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2 June 2018

PubMed ID

15553092

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2 June 2018