(Q55119666)

21 June 2018

title

Preservation of the metaproteome: variability of protein preservation in ancient dental calculus. (English)

1 reference

21 June 2018

author

Matthew Collins

6

1 reference

21 June 2018

Camilla Speller

7

1 reference

21 June 2018

Abigail Ramsøe

Abigail D Lowe

3

0 references

Meaghan Mackie

Meaghan Mackie

1

0 references

Jessica Hendy

Jessica Hendy

2

0 references

Malin Holst

5

Malin Holst

1 reference

21 June 2018

author name string

Alessandra Sperduti

4

1 reference

21 June 2018

publication date

11 August 2017

1 reference

21 June 2018

Science and Technology of Archaeological Research

published in

1 reference

21 June 2018

volume

3

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21 June 2018

issue

1

1 reference

21 June 2018

page(s)

74-86

1 reference

21 June 2018

Creative Commons Attribution 4.0 International

copyright license

start time

1 January 2017

1 reference

April 2022 Public Data File from Crossref

copyright status

copyrighted

1 reference

April 2022 Public Data File from Crossref

cites work

Intra- and Interskeletal Proteome Variations in Fresh and Buried Bones.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5633013

Neanderthal behaviour, diet, and disease inferred from ancient DNA in dental calculus

22 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5633013

Comparing ancient DNA survival and proteome content in 69 archaeological cattle tooth and bone samples from multiple European sites.

22 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5633013

Palaeoproteomic evidence identifies archaic hominins associated with the Châtelperronian at the Grotte du Renne

22 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5633013

Successful enrichment and recovery of whole mitochondrial genomes from ancient human dental calculus

22 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5633013

Glutamine deamidation: an indicator of antiquity, or preservational quality?

22 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5633013

Intrinsic challenges in ancient microbiome reconstruction using 16S rRNA gene amplification

22 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5633013

Biologically and diagenetically derived peptide modifications in moa collagens

22 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5633013

Ancient proteins resolve the evolutionary history of Darwin’s South American ungulates

22 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5633013

A new era in palaeomicrobiology: prospects for ancient dental calculus as a long-term record of the human oral microbiome

22 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5633013

Direct evidence of milk consumption from ancient human dental calculus

22 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5633013

Species identification of archaeological skin objects from Danish bogs: comparison between mass spectrometry-based peptide sequencing and microscopy-based methods

22 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5633013

ProteomeXchange provides globally coordinated proteomics data submission and dissemination

22 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5633013

Pathogens and host immunity in the ancient human oral cavity

22 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5633013

Recalibrating Equus evolution using the genome sequence of an early Middle Pleistocene horse

22 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5633013

Metagenomic sequencing reveals microbiota and its functional potential associated with periodontal disease

22 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5633013

Cleaning up the masses: exclusion lists to reduce contamination with HPLC-MS/MS

22 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5633013

Sequencing ancient calcified dental plaque shows changes in oral microbiota with dietary shifts of the Neolithic and Industrial revolutions

22 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5633013

Proteomics analysis of ancient food vessel stitching reveals >4000-year-old milk protein

22 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5633013

Assessing the extent of bone degradation using glutamine deamidation in collagen

22 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5633013

Detecting the immune system response of a 500 year-old Inca mummy.

22 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5633013

Deep sequencing of the oral microbiome reveals signatures of periodontal disease

22 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5633013

Temporal patterns of nucleotide misincorporations and DNA fragmentation in ancient DNA.

22 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5633013

Proteomic Analysis of a Pleistocene Mammoth Femur Reveals More than One Hundred Ancient Bone Proteins

22 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5633013

Novel protein identification methods for biomarker discovery via a proteomic analysis of periodontally healthy and diseased gingival crevicular fluid samples.

22 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5633013

Dental plaque biofilms: communities, conflict and control

22 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5633013

Individual differences in AMY1 gene copy number, salivary α-amylase levels, and the perception of oral starch

22 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5633013

Proteomic analysis of a noninvasive human model of acute inflammation and its resolution: the twenty-one day gingivitis model

22 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5633013

The human oral microbiome

22 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5633013

Relationships between subgingival microbiota and GCF biomarkers in generalized aggressive periodontitis.

22 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5633013

Removal of deaminated cytosines and detection of in vivo methylation in ancient DNA.

22 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5633013

Comparisons of subgingival microbial profiles of refractory periodontitis, severe periodontitis, and periodontal health using the human oral microbe identification microarray

22 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5633013

Patterns of damage in genomic DNA sequences from a Neandertal

22 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5633013

G*Power 3: a flexible statistical power analysis program for the social, behavioral, and biomedical sciences

22 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5633013

Large-scale identification of proteins in human salivary proteome by liquid chromatography/mass spectrometry and two-dimensional gel electrophoresis-mass spectrometry

22 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5633013

Open source system for analyzing, validating, and storing protein identification data

22 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5633013

The thermal history of human fossils and the likelihood of successful DNA amplification

22 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5633013

Deamidation of human proteins

22 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5633013

Ancient DNA analysis of dental calculus

22 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5633013

Proteomics identifies the composition and manufacturing recipe of the 2500-year old sourdough bread from Subeixi cemetery in China

13 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5633013

Site-specific deamidation of glutamine: a new marker of bone collagen deterioration

13 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5633013

Comparative proteomic analysis of whole saliva from chronic periodontitis patients

13 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5633013

Initial comparison of proteomic profiles of whole unstimulated saliva obtained from generalized aggressive periodontitis patients and healthy control subjects.

13 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5633013

Resolution of the type material of the Asian elephant,Elephas maximusLinnaeus, 1758 (Proboscidea, Elephantidae)

13 August 2018

1 reference

https://api.crossref.org/works/10.1080%2F20548923.2017.1361629

The survival of organic matter in bone: a review

21 January 2018

1 reference

https://api.crossref.org/works/10.1080%2F20548923.2017.1361629

Searching for Scandinavians in pre-Viking Scotland: molecular fingerprinting of Early Medieval combs

21 January 2018

1 reference

https://api.crossref.org/works/10.1080%2F20548923.2017.1361629

Isotopic paleodiet studies of skeletons from the Imperial Roman-age cemetery of Isola Sacra, Rome, Italy

21 January 2018

1 reference

https://api.crossref.org/works/10.1080%2F20548923.2017.1361629

Molecular evidence of use of hide glue in 4th millennium BC Europe

21 January 2018

1 reference

https://api.crossref.org/works/10.1080%2F20548923.2017.1361629

Proteome degradation in ancient bone: Diagenesis and phylogenetic potential

21 January 2018

1 reference

https://api.crossref.org/works/10.1080%2F20548923.2017.1361629

Site-specific development of periodontal disease is associated with increased levels of Porphyromonas gingivalis, Treponema denticola, and Tannerella forsythia in subgingival plaque

21 January 2018

1 reference

12 December 2020

Alterations in the salivary proteome associated with periodontitis

1 reference

12 December 2020

Proteomic identification of salivary biomarkers of type-2 diabetes

1 reference

12 December 2020

S100A8 as potential salivary biomarker of oral squamous cell carcinoma using nanoLC-MS/MS

1 reference

12 December 2020

Application of label-free absolute quantitative proteomics in human gingival crevicular fluid by LC/MS E (gingival exudatome)

1 reference

12 December 2020

10.1080/20548923.2017.1361629

Identifiers

DOI

1 reference

21 June 2018

PMC publication ID

5633013

1 reference

21 June 2018

PubMed publication ID

29098079

1 reference

21 June 2018