(Q55400430)

6 July 2018

review article

1 reference

title

Binding constraints on the evolution of enzymes and signalling proteins: the important role of negative pleiotropy. (English)

1 reference

6 July 2018

0 references

1 reference

David A Liberles

1

1 reference

6 July 2018

Makayla D M Tisdell

series ordinal

2

1 reference

6 July 2018

Johan A Grahnen

series ordinal

3

1 reference

6 July 2018

publication date

13 April 2011

1 reference

6 July 2018

Proceedings of the Royal Society B

number of pages

6

1 reference

based on heuristic

inferred from page(s)

published in

1 reference

6 July 2018

volume

278

1 reference

6 July 2018

issue

1714

1 reference

6 July 2018

page(s)

1930-1935

1 reference

6 July 2018

Phosphotyrosine signaling: evolving a new cellular communication system

cites work

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3107659

Mutational effects and the evolution of new protein functions.

10 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3107659

Relative contributions of intrinsic structural-functional constraints and translation rate to the evolution of protein-coding genes

10 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3107659

Tradeoff between stability and multispecificity in the design of promiscuous proteins

10 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3107659

Trade-off between positive and negative design of protein stability: from lattice models to real proteins

10 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3107659

The Pfam protein families database

10 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3107659

Evolution of efficient pathways for degradation of anthropogenic chemicals

10 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3107659

In the light of directed evolution: pathways of adaptive protein evolution

10 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3107659

Physicochemical principles that regulate the competition between functional and dysfunctional association of proteins

10 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3107659

Regulating the total level of a signaling protein can vary its dynamics in a range from switch like ultrasensitivity to adaptive responses.

10 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3107659

Medium- and short-chain dehydrogenase/reductase gene and protein families : the MDR superfamily

10 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3107659

Medium- and short-chain dehydrogenase/reductase gene and protein families : Medium-chain and short-chain dehydrogenases/reductases in retinoid metabolism

10 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3107659

Mistranslation-induced protein misfolding as a dominant constraint on coding-sequence evolution.

10 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3107659

Defining the specificity space of the human SRC homology 2 domain

10 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3107659

The hard cell: from proteomics to a whole cell model

10 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3107659

Evaluation of models for the evolution of protein sequences and functions under structural constraint

10 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3107659

Understanding retinol metabolism: structure and function of retinol dehydrogenases

10 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3107659

Specificity and versatility of SH3 and other proline-recognition domains: structural basis and implications for cellular signal transduction

10 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3107659

Subfunctionalization of duplicated genes as a transition state to neofunctionalization

10 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3107659

Modeling gene and genome duplications in eukaryotes

10 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3107659

The Adaptive Evolution Database (TAED): a phylogeny based tool for comparative genomics

10 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3107659

Src proteins/src genes: from sponges to mammals

10 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3107659

Network analysis of metabolic enzyme evolution in Escherichia coli

10 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3107659

Stability and the evolvability of function in a model protein

10 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3107659

Optimization of specificity in a cellular protein interaction network by negative selection

10 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3107659

The origins of genome complexity

10 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3107659

Enzymes with extra talents: moonlighting functions and catalytic promiscuity

10 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3107659

The probability of preservation of a newly arisen gene duplicate

10 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3107659

The adaptive evolution database (TAED)

10 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3107659

How to guarantee optimal stability for most representative structures in the Protein Data Bank.

10 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3107659

Evolution of a metabolic pathway for degradation of a toxic xenobiotic: the patchwork approach

10 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3107659

Keeping the blood flowing-plasminogen activator genes and feeding behavior in vampire bats.

10 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3107659

Understanding hierarchical protein evolution from first principles 1 1Edited by J. Thornton

12 August 2018

1 reference

Crossref

https://api.crossref.org/works/10.1098%2FRSPB.2010.2637

Why are proteins marginally stable?

21 January 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/21490020

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

The pattern of evolution of smaller-scale gene duplicates in mammalian genomes is more consistent with neo- than subfunctionalisation

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/21490020

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1098/RSPB.2010.2637

1 reference

6 July 2018

PMCID

3107659

1 reference

6 July 2018

PubMed ID

21490020

1 reference

6 July 2018