(Q55427470)

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Tissue-Specific Transcriptome for Poeciliopsis prolifica Reveals Evidence for Genetic Adaptation Related to the Evolution of a Placental Fish.

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scholarly article

1 reference

Europe PubMed Central

9 July 2018

http://europepmc.org/abstract/PMC/6027864

Tissue-Specific Transcriptome for Poeciliopsis prolifica Reveals Evidence for Genetic Adaptation Related to the Evolution of a Placental Fish. (English)

1 reference

Europe PubMed Central

9 July 2018

http://europepmc.org/abstract/PMC/6027864

0 references

Poeciliopsis prolifica

object named as

Poeciliopsis prolifica

1 reference

based on heuristic

inferred from title

genetic adaptation

1 reference

based on heuristic

inferred from title

David N. Reznick

object named as

David N Reznick

3

0 references

author name string

Nathaniel K Jue

1

1 reference

Europe PubMed Central

9 July 2018

http://europepmc.org/abstract/PMC/6027864

Robert J Foley

2

1 reference

Europe PubMed Central

9 July 2018

http://europepmc.org/abstract/PMC/6027864

Rachel J O'Neill

4

1 reference

Europe PubMed Central

9 July 2018

http://europepmc.org/abstract/PMC/6027864

Michael J O'Neill

5

1 reference

Europe PubMed Central

9 July 2018

http://europepmc.org/abstract/PMC/6027864

publication date

2 July 2018

1 reference

Europe PubMed Central

9 July 2018

http://europepmc.org/abstract/PMC/6027864

1 reference

Europe PubMed Central

9 July 2018

http://europepmc.org/abstract/PMC/6027864

8

1 reference

Europe PubMed Central

9 July 2018

http://europepmc.org/abstract/PMC/6027864

2181-2192

1 reference

Europe PubMed Central

9 July 2018

http://europepmc.org/abstract/PMC/6027864

7

1 reference

Europe PubMed Central

9 July 2018

http://europepmc.org/abstract/PMC/6027864

describes a project that uses

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DEseq2

DESeq2

1 reference

CZ Software Mentions: A large dataset of software mentions in the biomedical literature

0 references

Identification of real microRNA precursors with a pseudo structure status composition approach

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6027864

9 July 2018

Moderated estimation of fold change and dispersion for RNA-seq data with DESeq2

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6027864

9 July 2018

Identification of a gonad-expression differential gene insulin-like growth factor-1 receptor (Igf1r) in the swamp eel (Monopterus albus).

1 reference

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9 July 2018

Paleovirology of 'syncytins', retroviral env genes exapted for a role in placentation

1 reference

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9 July 2018

De novo transcript sequence reconstruction from RNA-seq using the Trinity platform for reference generation and analysis

1 reference

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9 July 2018

The genome of the platyfish, Xiphophorus maculatus, provides insights into evolutionary adaptation and several complex traits

1 reference

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9 July 2018

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1 reference

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9 July 2018

Streaming fragment assignment for real-time analysis of sequencing experiments

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6027864

9 July 2018

Transposable element recruitments in the mammalian placenta: impacts and mechanisms.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6027864

9 July 2018

Fast gapped-read alignment with Bowtie 2

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6027864

9 July 2018

Conserved function of lincRNAs in vertebrate embryonic development despite rapid sequence evolution

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6027864

9 July 2018

MACSE: Multiple Alignment of Coding SEquences accounting for frameshifts and stop codons

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6027864

9 July 2018

Transposon-mediated rewiring of gene regulatory networks contributed to the evolution of pregnancy in mammals.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6027864

9 July 2018

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1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6027864

9 July 2018

Full-length transcriptome assembly from RNA-Seq data without a reference genome

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6027864

9 July 2018

Analysis of expressed sequence tags from the placenta of the live-bearing fish Poeciliopsis (Poeciliidae).

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6027864

9 July 2018

GRAMD4 mimics p53 and mediates the apoptotic function of p73 at mitochondria

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6027864

9 July 2018

The placenta: transcriptional, epigenetic, and physiological integration during development

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6027864

9 July 2018

Fast and accurate long-read alignment with Burrows-Wheeler transform

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6027864

9 July 2018

Network visualization and analysis of gene expression data using BioLayout Express(3D).

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6027864

9 July 2018

Unearthing the roles of imprinted genes in the placenta.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6027864

9 July 2018

trimAl: a tool for automated alignment trimming in large-scale phylogenetic analyses

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6027864

9 July 2018

The function of non-coding RNAs in genomic imprinting

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6027864

9 July 2018

The loci of evolution: how predictable is genetic evolution?

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6027864

9 July 2018

Resurrecting the role of transcription factor change in developmental evolution.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6027864

9 July 2018

Viviparity-driven conflict: more to speciation than meets the fly.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6027864

9 July 2018

Transposable elements and the evolution of regulatory networks

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6027864

9 July 2018

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1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6027864

9 July 2018

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1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6027864

9 July 2018

PAML 4: phylogenetic analysis by maximum likelihood

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6027864

9 July 2018

RNAmmer: consistent and rapid annotation of ribosomal RNA genes

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6027864

9 July 2018

Evolution of the placenta in eutherian mammals.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6027864

9 July 2018

Many genes in fish have species-specific asymmetric rates of molecular evolution

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6027864

9 July 2018

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1 reference

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Blast2GO: a universal tool for annotation, visualization and analysis in functional genomics research

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6027864

9 July 2018

Genome duplication in the teleost fish Tetraodon nigroviridis reveals the early vertebrate proto-karyotype

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6027864

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The C2 domains of the class I Rab11 family of interacting proteins target recycling vesicles to the plasma membrane.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6027864

9 July 2018

The RCP-Rab11 complex regulates endocytic protein sorting

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6027864

9 July 2018

MUSCLE: multiple sequence alignment with high accuracy and high throughput

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6027864

9 July 2018

Rab11-FIP4 interacts with Rab11 in a GTP-dependent manner and its overexpression condenses the Rab11 positive compartment in HeLa cells

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6027864

9 July 2018

A retrotransposon-derived gene, PEG10, is a novel imprinted gene located on human chromosome 7q21

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6027864

9 July 2018

Predicting transmembrane protein topology with a hidden Markov model: application to complete genomes

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6027864

9 July 2018

Repeat polymorphisms within gene regions: phenotypic and evolutionary implications

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6027864

9 July 2018

Syncytin is a captive retroviral envelope protein involved in human placental morphogenesis

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6027864

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A comparative study of the corpus luteum

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6027864

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"GRANDFATHER EFFECTS": THE GENETICS OF INTERPOPULATION DIFFERENCES IN OFFSPRING SIZE IN THE MOSQUITO FISH.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6027864

12 August 2018

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1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6027864

12 August 2018

Using MCL to extract clusters from networks.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6027864

12 August 2018

Interpopulation variation in life-history traits of Poeciliopsis prolifica: implications for the study of placental evolution.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6027864

12 August 2018

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1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6027864

12 August 2018

Independent origins and rapid evolution of the placenta in the fish genus Poeciliopsis.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6027864

12 August 2018

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1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6027864

12 August 2018

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1 reference

https://pubmed.ncbi.nlm.nih.gov/29720394

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

The follicular placenta of the viviparous fish, Heterandria formosa. I. Ultrastructure and development of the embryonic absorptive surface

1 reference

https://pubmed.ncbi.nlm.nih.gov/29720394

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Identifiers

10.1534/G3.118.200270

1 reference

Europe PubMed Central

9 July 2018

http://europepmc.org/abstract/PMC/6027864

1 reference

Europe PubMed Central

9 July 2018

http://europepmc.org/abstract/PMC/6027864

1 reference

Europe PubMed Central

9 July 2018

http://europepmc.org/abstract/PMC/6027864

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