(Q55514125)

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:29949983%20AND%20SRC:MED&resulttype=core&format=json

2 April 2020

title

Bayesian parameter estimation for biochemical reaction networks using region-based adaptive parallel tempering (English)

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:29949983%20AND%20SRC:MED&resulttype=core&format=json

2 April 2020

4

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:29949983%20AND%20SRC:MED&resulttype=core&format=json

2 April 2020

3

Fabian J Theis

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:29949983%20AND%20SRC:MED&resulttype=core&format=json

2 April 2020

author name string

Benjamin Ballnus

series ordinal

1

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:29949983%20AND%20SRC:MED&resulttype=core&format=json

2 April 2020

Steffen Schaper

series ordinal

2

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:29949983%20AND%20SRC:MED&resulttype=core&format=json

2 April 2020

language of work or name

English

0 references

publication date

1 July 2018

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:29949983%20AND%20SRC:MED&resulttype=core&format=json

2 April 2020

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:29949983%20AND%20SRC:MED&resulttype=core&format=json

2 April 2020

volume

34

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:29949983%20AND%20SRC:MED&resulttype=core&format=json

2 April 2020

issue

13

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:29949983%20AND%20SRC:MED&resulttype=core&format=json

2 April 2020

page(s)

i494-i501

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:29949983%20AND%20SRC:MED&resulttype=core&format=json

Creative Commons Attribution-NonCommercial 4.0 International

2 April 2020

copyright license

start time

27 June 2018

1 reference

April 2022 Public Data File from Crossref

copyright status

copyrighted

0 references

describes a project that uses

Bayes' theorem

1 reference

18 June 2022

https://europepmc.org/article/PMC/6022572

based on heuristic

inferred from PubMed Central ID database lookup

cites work

PESTO: Parameter EStimation TOolbox

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6022572

Comprehensive benchmarking of Markov chain Monte Carlo methods for dynamical systems

15 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6022572

Parallelization and High-Performance Computing Enables Automated Statistical Inference of Multi-scale Models

15 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6022572

Robust parameter estimation for dynamical systems from outlier-corrupted data

15 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6022572

Parameter estimation for dynamical systems with discrete events and logical operations

15 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6022572

Wormhole Hamiltonian Monte Carlo

15 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6022572

Single-cell mRNA transfection studies: delivery, kinetics and statistics by numbers

15 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6022572

An integrated strategy for prediction uncertainty analysis

15 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6022572

Structural identifiability of systems biology models: a critical comparison of methods

15 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6022572

Division of labor by dual feedback regulators controls JAK2/STAT5 signaling over broad ligand range.

15 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6022572

Bayesian methods in bioinformatics and computational systems biology

15 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6022572

Statistical significance for hierarchical clustering in genetic association and microarray expression studies

15 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6022572

Identification of nucleocytoplasmic cycling as a remote sensor in cellular signaling by databased modeling

15 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6022572

GenSSI 2.0: Multi-experiment structural identifiability analysis of SBML models.

15 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6022572

Determining identifiable parameter combinations using subset profiling.

12 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6022572

Scalable inference of heterogeneous reaction kinetics from pooled single-cell recordings

12 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6022572

High-dimensional Bayesian parameter estimation: case study for a model of JAK2/STAT5 signaling.

12 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6022572

Joining forces of Bayesian and frequentist methodology: a study for inference in the presence of non-identifiability

12 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6022572

Determinants of intracellular RNA pharmacokinetics: Implications for RNA-based immunotherapeutics

12 August 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/29949983

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

An Introduction to MCMC for Machine Learning

1 reference

https://opencitations.net/index/coci/api/v1/references/10.1093/BIOINFORMATICS/BTY229

State-dependent swap strategies and automatic reduction of number of temperatures in adaptive parallel tempering algorithm

1 April 2022

1 reference

https://opencitations.net/index/coci/api/v1/references/10.1093/BIOINFORMATICS/BTY229

An Adaptive Parallel Tempering Algorithm

1 April 2022

1 reference

https://opencitations.net/index/coci/api/v1/references/10.1093/BIOINFORMATICS/BTY229

Dynamic temperature selection for parallel tempering in Markov chain Monte Carlo simulations

1 April 2022

1 reference

https://opencitations.net/index/coci/api/v1/references/10.1093/BIOINFORMATICS/BTY229

Riemann manifold Langevin and Hamiltonian Monte Carlo methods

1 April 2022

1 reference

https://opencitations.net/index/coci/api/v1/references/10.1093/BIOINFORMATICS/BTY229

An Adaptive Metropolis Algorithm

1 April 2022

1 reference

https://opencitations.net/index/coci/api/v1/references/10.1093/BIOINFORMATICS/BTY229

Inferring signaling pathway topologies from multiple perturbation measurements of specific biochemical species.

1 April 2022

1 reference

https://opencitations.net/index/coci/api/v1/references/10.1093/BIOINFORMATICS/BTY229

10.1093/BIOINFORMATICS/BTY229

1 April 2022

Identifiers

DOI

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:29949983%20AND%20SRC:MED&resulttype=core&format=json

journals/bioinformatics/BallnusSTH18

2 April 2020

DBLP publication ID

1 reference

DBLP Dataset 2021-01-02

28 January 2021

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:29949983%20AND%20SRC:MED&resulttype=core&format=json

2 April 2020

1 reference