(Q56880081)

https://api.crossref.org/works/10.1098%2FRSPB.2012.0595

Quantifying differences in the tempo of human immunodeficiency virus type 1 subtype evolution

21 January 2018

1 reference

https://api.crossref.org/works/10.1098%2FRSPB.2012.0595

Synonymous substitution rates predict HIV disease progression as a result of underlying replication dynamics

21 January 2018

1 reference

https://api.crossref.org/works/10.1098%2FRSPB.2012.0595

Evolutionary analysis of the dynamics of viral infectious disease

21 January 2018

1 reference

https://api.crossref.org/works/10.1098%2FRSPB.2012.0595

Human immunodeficiency virus type 1 env evolves toward ancestral states upon transmission to a new host.

21 January 2018

1 reference

https://api.crossref.org/works/10.1098%2FRSPB.2012.0595

Demographic processes affect HIV-1 evolution in primary infection before the onset of selective processes

21 January 2018

1 reference

https://api.crossref.org/works/10.1098%2FRSPB.2012.0595

Unequal evolutionary rates in the human immunodeficiency virus type 1 (HIV-1) pandemic: the evolutionary rate of HIV-1 slows down when the epidemic rate increases

21 January 2018

1 reference

https://api.crossref.org/works/10.1098%2FRSPB.2012.0595

Identification and characterization of transmitted and early founder virus envelopes in primary HIV-1 infection

21 January 2018

1 reference

https://api.crossref.org/works/10.1098%2FRSPB.2012.0595

Genetic identity, biological phenotype, and evolutionary pathways of transmitted/founder viruses in acute and early HIV-1 infection

21 January 2018

1 reference

https://api.crossref.org/works/10.1098%2FRSPB.2012.0595

Transmission of single HIV-1 genomes and dynamics of early immune escape revealed by ultra-deep sequencing

21 January 2018

1 reference

https://api.crossref.org/works/10.1098%2FRSPB.2012.0595

Whole genome deep sequencing of HIV-1 reveals the impact of early minor variants upon immune recognition during acute infection

21 January 2018

1 reference

https://api.crossref.org/works/10.1098%2FRSPB.2012.0595

Recombination rate and selection strength in HIV intra-patient evolution

21 January 2018

1 reference

https://api.crossref.org/works/10.1098%2FRSPB.2012.0595

Interplay between RNA structure and protein evolution in HIV-1.

21 January 2018

1 reference

https://api.crossref.org/works/10.1098%2FRSPB.2012.0595

Stability of RNA stem-loop structure and distribution of non-random structure in the human immunodeficiency virus (HIV-I).

21 January 2018

1 reference

https://api.crossref.org/works/10.1098%2FRSPB.2012.0595

Central role of reverting mutations in HLA associations with human immunodeficiency virus set point

21 January 2018

1 reference

https://api.crossref.org/works/10.1098%2FRSPB.2012.0595

Persistence of transmitted drug resistance among subjects with primary human immunodeficiency virus infection.

21 January 2018

1 reference

https://api.crossref.org/works/10.1098%2FRSPB.2012.0595

HIV evolution: CTL escape mutation and reversion after transmission

21 January 2018

1 reference

https://api.crossref.org/works/10.1098%2FRSPB.2012.0595

Modelling the evolution and spread of HIV immune escape mutants

21 January 2018

1 reference

https://api.crossref.org/works/10.1098%2FRSPB.2012.0595

Replication rate and evolution in the human immunodeficiency virus

21 January 2018

1 reference

https://api.crossref.org/works/10.1098%2FRSPB.2012.0595

Linking dynamical and population genetic models of persistent viral infection.

21 January 2018

1 reference

https://api.crossref.org/works/10.1098%2FRSPB.2012.0595

Rapid turnover of plasma virions and CD4 lymphocytes in HIV-1 infection

21 January 2018

1 reference

https://api.crossref.org/works/10.1098%2FRSPB.2012.0595

HIV-1 dynamics in vivo: virion clearance rate, infected cell life-span, and viral generation time

21 January 2018

1 reference

https://api.crossref.org/works/10.1098%2FRSPB.2012.0595

Identification of a reservoir for HIV-1 in patients on highly active antiretroviral therapy

21 January 2018

1 reference

https://api.crossref.org/works/10.1098%2FRSPB.2012.0595

Latent infection of CD4+ T cells provides a mechanism for lifelong persistence of HIV-1, even in patients on effective combination therapy

21 January 2018

1 reference

https://api.crossref.org/works/10.1098%2FRSPB.2012.0595

Treatment intensification does not reduce residual HIV-1 viremia in patients on highly active antiretroviral therapy

21 January 2018

1 reference

https://api.crossref.org/works/10.1098%2FRSPB.2012.0595

No evidence for decay of the latent reservoir in HIV-1-infected patients receiving intensive enfuvirtide-containing antiretroviral therapy

21 January 2018

1 reference

https://api.crossref.org/works/10.1098%2FRSPB.2012.0595

Analysis of human immunodeficiency virus type 1 viremia and provirus in resting CD4+ T cells reveals a novel source of residual viremia in patients on antiretroviral therapy

21 January 2018

1 reference

https://api.crossref.org/works/10.1098%2FRSPB.2012.0595

Selection of HIV variants with signature genotypic characteristics during heterosexual transmission

21 January 2018

1 reference

https://api.crossref.org/works/10.1098%2FRSPB.2012.0595

High Multiplicity Infection by HIV-1 in Men Who Have Sex with Men.

21 January 2018

1 reference

https://api.crossref.org/works/10.1098%2FRSPB.2012.0595

Role of donor genital tract HIV-1 diversity in the transmission bottleneck

21 January 2018

1 reference

https://api.crossref.org/works/10.1098%2FRSPB.2012.0595

Low-dose rectal inoculation of rhesus macaques by SIVsmE660 or SIVmac251 recapitulates human mucosal infection by HIV-1.

21 January 2018

1 reference

https://api.crossref.org/works/10.1098%2FRSPB.2012.0595

Targeting early infection to prevent HIV-1 mucosal transmission.

21 January 2018

1 reference

https://api.crossref.org/works/10.1098%2FRSPB.2012.0595

Transmission of HIV-1 Gag immune escape mutations is associated with reduced viral load in linked recipients

21 January 2018

1 reference

https://api.crossref.org/works/10.1098%2FRSPB.2012.0595

Impaired replication capacity of acute/early viruses in persons who become HIV controllers

21 January 2018

1 reference

https://api.crossref.org/works/10.1098%2FRSPB.2012.0595

Characterization of glycosylation profiles of HIV-1 transmitted/founder envelopes by mass spectrometry

21 January 2018

1 reference

https://api.crossref.org/works/10.1098%2FRSPB.2012.0595

Recurrent signature patterns in HIV-1 B clade envelope glycoproteins associated with either early or chronic infections

21 January 2018

1 reference

https://api.crossref.org/works/10.1098%2FRSPB.2012.0595

The genotype of early-transmitting HIV gp120s promotes α (4) β(7)-reactivity, revealing α (4) β(7) +/CD4+ T cells as key targets in mucosal transmission

21 January 2018

1 reference

https://api.crossref.org/works/10.1098%2FRSPB.2012.0595

In vivo evolution of HIV-1 co-receptor usage and sensitivity to chemokine-mediated suppression.

21 January 2018

1 reference

https://api.crossref.org/works/10.1098%2FRSPB.2012.0595

Presence of CXCR4-using HIV-1 in patients with recently diagnosed infection: correlates and evidence for transmission.

21 January 2018

1 reference

https://api.crossref.org/works/10.1098%2FRSPB.2012.0595

HIV-1 transmission, by stage of infection

21 January 2018

1 reference

https://api.crossref.org/works/10.1098%2FRSPB.2012.0595

Rates of HIV-1 transmission per coital act, by stage of HIV-1 infection, in Rakai, Uganda

21 January 2018

1 reference

https://api.crossref.org/works/10.1098%2FRSPB.2012.0595

Prevalence of drug-resistant HIV-1 variants in untreated individuals in Europe: implications for clinical management

21 January 2018

1 reference

https://api.crossref.org/works/10.1098%2FRSPB.2012.0595

The impact of transmission clusters on primary drug resistance in newly diagnosed HIV-1 infection

21 January 2018

1 reference

https://api.crossref.org/works/10.1098%2FRSPB.2012.0595

Factors influencing the emergence and spread of HIV drug resistance arising from rollout of antiretroviral pre-exposure prophylaxis (PrEP)

21 January 2018

1 reference

https://api.crossref.org/works/10.1098%2FRSPB.2012.0595

The fitness effects of synonymous mutations in DNA and RNA viruses

21 January 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3385732

HIV evolutionary dynamics within and among hosts

2 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3385732

Consistent viral evolutionary changes associated with the progression of human immunodeficiency virus type 1 infection

2 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3385732

HIV-1 replication is controlled at the level of T cell activation and proviral integration

2 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3385732

Frequency of CXCR4-using viruses in primary HIV-1 infections using ultra-deep pyrosequencing

2 November 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/22593106