(Q56981373)

Joachim Kopka

3

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Lothar Willmitzer

4

Lothar Willmitzer

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Alisdair R Fernie

5

Alisdair R Fernie

0 references

Nicolas Schauer

2

Application of metabolomics to plant genotype discrimination using statistics and machine learning

Nicolas Schauer

0 references

publication date

June 2006

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published in

Nature Protocols

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volume

1

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issue

1

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page(s)

387-396

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cites work

1 reference

https://api.crossref.org/works/10.1038%2FNPROT.2006.59

Deactivation of photosynthetic activities is triggered by loss of a small amount of water in a desiccation-tolerant cyanobacterium, Nostoc commune

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNPROT.2006.59

Metabolite profiling: from diagnostics to systems biology

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNPROT.2006.59

Metabolite profiling in plant biology: platforms and destinations

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNPROT.2006.59

Post-genomics approaches for the elucidation of plant adaptive mechanisms to sulphur deficiency

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNPROT.2006.59

Plant metabolomics: large-scale phytochemistry in the functional genomics era.

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNPROT.2006.59

Quantitative Metabolome Analysis Using Capillary Electrophoresis Mass Spectrometry

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNPROT.2006.59

Metabolic profiling allows comprehensive phenotyping of genetically or environmentally modified plant systems

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNPROT.2006.59

Metabolite profiling for plant functional genomics

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNPROT.2006.59

HPLC-NMR-MS: past, present and future

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNPROT.2006.59

Genius: a genetic algorithm for automated structure elucidation from 13C NMR spectra

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNPROT.2006.59

Derivatization in Mass Spectrometry—1. Silylation

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNPROT.2006.59

Metabolic profiling of transgenic tomato plants overexpressing hexokinase reveals that the influence of hexose phosphorylation diminishes during fruit development

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNPROT.2006.59

Simultaneous analysis of metabolites in potato tuber by gas chromatography-mass spectrometry

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNPROT.2006.59

Nontargeted metabolome analysis by use of Fourier Transform Ion Cyclotron Mass Spectrometry

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNPROT.2006.59

Use of liquid chromatography/time-of-flight mass spectrometry and multivariate statistical analysis shows promise for the detection of drug metabolites in biological fluids

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNPROT.2006.59

Simultaneous determination of the main metabolites in rice leaves using capillary electrophoresis mass spectrometry and capillary electrophoresis diode array detection

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNPROT.2006.59

Analytical characterisation of crude extracts from an African Ancistrocladus species using high-performance liquid chromatography and capillary electrophoresis coupled to ion trap mass spectrometry

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNPROT.2006.59

Construction and application of a mass spectral and retention time index database generated from plant GC/EI-TOF-MS metabolite profiles

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNPROT.2006.59

XCMS: processing mass spectrometry data for metabolite profiling using nonlinear peak alignment, matching, and identification

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNPROT.2006.59

Metabolomics spectral formatting, alignment and conversion tools (MSFACTs).

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNPROT.2006.59

Differential metabolic networks unravel the effects of silent plant phenotypes

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNPROT.2006.59

Exploring the temperature-stress metabolome of Arabidopsis

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNPROT.2006.59

Identification of Uncommon Plant Metabolites Based on Calculation of Elemental Compositions Using Gas Chromatography and Quadrupole Mass Spectrometry

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNPROT.2006.59

Design of experiments: an efficient strategy to identify factors influencing extraction and derivatization of Arabidopsis thaliana samples in metabolomic studies with gas chromatography/mass spectrometry

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNPROT.2006.59

Lotus japonicus metabolic profiling. Development of gas chromatography-mass spectrometry resources for the study of plant-microbe interactions

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNPROT.2006.59

Temporally regulated expression of a yeast invertase in potato tubers allows dissection of the complex metabolic phenotype obtained following its constitutive expression

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNPROT.2006.59

Hierarchical metabolomics demonstrates substantial compositional similarity between genetically modified and conventional potato crops

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNPROT.2006.59

NMR and HPLC-UV profiling of potatoes with genetic modifications to metabolic pathways.

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNPROT.2006.59

Systems rebalancing of metabolism in response to sulfur deprivation, as revealed by metabolome analysis of Arabidopsis plants

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNPROT.2006.59

Metabolic profiling reveals altered nitrogen nutrient regimes have diverse effects on the metabolism of hydroponically-grown tomato (Solanum lycopersicum) plants

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNPROT.2006.59

Metabolic profiling of Medicago truncatula cell cultures reveals the effects of biotic and abiotic elicitors on metabolism

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNPROT.2006.59

The products of a single maize sesquiterpene synthase form a volatile defense signal that attracts natural enemies of maize herbivores

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNPROT.2006.59

Methyl jasmonate and yeast elicitor induce differential transcriptional and metabolic re-programming in cell suspension cultures of the model legume Medicago truncatula.

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNPROT.2006.59

Functional genomics by integrated analysis of metabolome and transcriptome of Arabidopsis plants over-expressing an MYB transcription factor

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNPROT.2006.59

A functional genomics approach toward the understanding of secondary metabolism in plant cells

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNPROT.2006.59

Cytochrome P450 CYP710A encodes the sterol C-22 desaturase in Arabidopsis and tomato.

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNPROT.2006.59

Elucidation of gene-to-gene and metabolite-to-gene networks in arabidopsis by integration of metabolomics and transcriptomics

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNPROT.2006.59

Comprehensive metabolic profiling and phenotyping of interspecific introgression lines for tomato improvement.

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNPROT.2006.59

Integrating transcriptional and metabolite profiles to direct the engineering of lovastatin-producing fungal strains.

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNPROT.2006.59

Parallel analysis of transcript and metabolic profiles: a new approach in systems biology

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNPROT.2006.59

A proposed framework for the description of plant metabolomics experiments and their results

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNPROT.2006.59

Metabolite fingerprinting: detecting biological features by independent component analysis

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNPROT.2006.59

Non-linear PCA: a missing data approach

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNPROT.2006.59

Observing and interpreting correlations in metabolomic networks

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNPROT.2006.59

Profiling of diurnal patterns of metabolite and transcript abundance in potato (Solanum tuberosum) leaves

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNPROT.2006.59

The critical role of Arabidopsis electron-transfer flavoprotein:ubiquinone oxidoreductase during dark-induced starvation

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNPROT.2006.59

From measurements of metabolites to metabolomics: an 'on the fly' perspective illustrated by recent studies of carbon-nitrogen interactions

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNPROT.2006.59

Metabolic profiling of laser microdissected vascular bundles of Arabidopsis thaliana

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNPROT.2006.59

Kinetics of labelling of organic and amino acids in potato tubers by gas chromatography-mass spectrometry following incubation in (13)C labelled isotopes

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNPROT.2006.59

Tomato aromatic amino acid decarboxylases participate in synthesis of the flavor volatiles 2-phenylethanol and 2-phenylacetaldehyde

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNPROT.2006.59

De Novo Amino Acid Biosynthesis in Potato Tubers Is Regulated by Sucrose Levels

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNPROT.2006.59

GMD@CSB.DB: the Golm Metabolome Database

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNPROT.2006.59

GC-MS libraries for the rapid identification of metabolites in complex biological samples

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNPROT.2006.59

Analysis of highly polar compounds of plant origin: combination of hydrophilic interaction chromatography and electrospray ion trap mass spectrometry.

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNPROT.2006.59